Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000093A_C01 KMC000093A_c01
(723 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_180151.1| unknown protein; protein id: At2g25800.1 [Arabi... 146 3e-34
ref|NP_179591.1| unknown protein; protein id: At2g20010.1 [Arabi... 134 1e-30
ref|NP_180900.1| unknown protein; protein id: At2g33420.1 [Arabi... 84 2e-15
dbj|BAC43072.1| unknown protein [Arabidopsis thaliana] gi|290290... 84 2e-15
pir||A86177 hypothetical protein [imported] - Arabidopsis thalia... 79 5e-14
>ref|NP_180151.1| unknown protein; protein id: At2g25800.1 [Arabidopsis thaliana]
gi|25412344|pir||H84652 hypothetical protein At2g25800
[imported] - Arabidopsis thaliana
gi|3643603|gb|AAC42250.1| unknown protein [Arabidopsis
thaliana]
Length = 993
Score = 146 bits (369), Expect = 3e-34
Identities = 68/103 (66%), Positives = 81/103 (78%)
Frame = -3
Query: 721 KFLTDLFWSNGDGLPAELIEKHSATARGVLPLFHADTKHVIEQFSQLTMEMYGSSAKSRL 542
K + D+FW+NGDGL +LI+K S T RGVLPLF DT +IE+F T+E YGSSAKSRL
Sbjct: 891 KSMKDMFWANGDGLAMDLIDKFSTTVRGVLPLFSTDTDSLIERFKGTTLEAYGSSAKSRL 950
Query: 541 PLPPPADQWSPREPNTLLRVLCYRNDEAAAKFLKKNYNLPTKV 413
PLPP + QW+ EPNTLLRVLCYRNDE+A +FLKK YNLP K+
Sbjct: 951 PLPPTSGQWNGMEPNTLLRVLCYRNDESATRFLKKTYNLPKKL 993
>ref|NP_179591.1| unknown protein; protein id: At2g20010.1 [Arabidopsis thaliana]
gi|25411952|pir||H84583 hypothetical protein At2g20010
[imported] - Arabidopsis thaliana
gi|4580471|gb|AAD24395.1| unknown protein [Arabidopsis
thaliana]
Length = 952
Score = 134 bits (338), Expect = 1e-30
Identities = 64/103 (62%), Positives = 76/103 (73%)
Frame = -3
Query: 721 KFLTDLFWSNGDGLPAELIEKHSATARGVLPLFHADTKHVIEQFSQLTMEMYGSSAKSRL 542
KFL DLFWSNGDGLP +LIEK S T + +LPL DT +IE+F + +E +GS + +L
Sbjct: 850 KFLCDLFWSNGDGLPLDLIEKVSTTVKSILPLLRTDTDSLIERFKAVCLENHGSD-RGKL 908
Query: 541 PLPPPADQWSPREPNTLLRVLCYRNDEAAAKFLKKNYNLPTKV 413
PLPP + WSP EPNTLLRVLCYR DE A KFLKK YNLP K+
Sbjct: 909 PLPPTSGPWSPTEPNTLLRVLCYRYDEPATKFLKKTYNLPRKL 951
>ref|NP_180900.1| unknown protein; protein id: At2g33420.1 [Arabidopsis thaliana]
gi|25408269|pir||C84745 hypothetical protein At2g33420
[imported] - Arabidopsis thaliana
gi|2459424|gb|AAB80659.1| unknown protein [Arabidopsis
thaliana]
Length = 1039
Score = 84.0 bits (206), Expect = 2e-15
Identities = 41/104 (39%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Frame = -3
Query: 715 LTDLFWSNGDGL-PAELIEKHSATARGVLPLFHADTKHVIEQFSQLTMEMYGSS---AKS 548
L +F + G+GL P E++++ + T GV+ L T+ ++E FS +T E G +
Sbjct: 935 LKRVFCTCGEGLIPEEVVDREAETVEGVIQLMSQPTEQLMEDFSIVTCETSGMGMVGSGQ 994
Query: 547 RLPLPPPADQWSPREPNTLLRVLCYRNDEAAAKFLKKNYNLPTK 416
+LP+PP +W+ +PNT+LRVLC+RND A +FLKK++ LP +
Sbjct: 995 KLPMPPTTGRWNRSDPNTILRVLCHRNDRVANQFLKKSFQLPKR 1038
>dbj|BAC43072.1| unknown protein [Arabidopsis thaliana] gi|29029070|gb|AAO64914.1|
At2g33420 [Arabidopsis thaliana]
Length = 1039
Score = 84.0 bits (206), Expect = 2e-15
Identities = 41/104 (39%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Frame = -3
Query: 715 LTDLFWSNGDGL-PAELIEKHSATARGVLPLFHADTKHVIEQFSQLTMEMYGSS---AKS 548
L +F + G+GL P E++++ + T GV+ L T+ ++E FS +T E G +
Sbjct: 935 LKRVFCTCGEGLIPEEVVDREAETVEGVIQLMSQPTEQLMEDFSIVTCETSGMGMVGSGQ 994
Query: 547 RLPLPPPADQWSPREPNTLLRVLCYRNDEAAAKFLKKNYNLPTK 416
+LP+PP +W+ +PNT+LRVLC+RND A +FLKK++ LP +
Sbjct: 995 KLPMPPTTGRWNRSDPNTILRVLCHRNDRVANQFLKKSFQLPKR 1038
>pir||A86177 hypothetical protein [imported] - Arabidopsis thaliana
gi|1903347|gb|AAB70427.1| EST gb|ATTS5672 comes from this
gene. [Arabidopsis thaliana]
Length = 1035
Score = 79.3 bits (194), Expect = 5e-14
Identities = 39/101 (38%), Positives = 63/101 (61%), Gaps = 4/101 (3%)
Frame = -3
Query: 715 LTDLFWSNGDGL-PAELIEKHSATARGVLPLFHADTKHVIEQFSQLTMEMYGSS---AKS 548
L ++ + G+GL P E++++ + T GV+ L T+ ++E FS +T E G
Sbjct: 931 LKKVYCTCGEGLIPEEVVDREAETVEGVIQLMGQPTEQLMEDFSIVTCESSGMGLVGTGQ 990
Query: 547 RLPLPPPADQWSPREPNTLLRVLCYRNDEAAAKFLKKNYNL 425
+LP+PP +W+ +PNT+LRVLCYR+D A +FLKK++ L
Sbjct: 991 KLPMPPTTGRWNRSDPNTILRVLCYRDDRVANQFLKKSFQL 1031
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 607,873,246
Number of Sequences: 1393205
Number of extensions: 12904607
Number of successful extensions: 28035
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 27278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28024
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 33780557640
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
