Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000089A_C01 KMC000089A_c01
(582 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB54520.1| MAP3K epsilon 1 protein kinase [Brassica napus] 151 5e-36
ref|NP_187962.1| MAP3K epsilon protein kinase; protein id: At3g1... 148 6e-35
emb|CAA12272.1| MAP3K epsilon protein kinase [Arabidopsis thaliana] 148 6e-35
ref|NP_187455.1| putative MAP3K epsilon protein kinase; protein ... 144 6e-34
gb|AAL87195.1|AF480497_23 putative MAP3K epsilon protein kinase ... 115 5e-25
>emb|CAB54520.1| MAP3K epsilon 1 protein kinase [Brassica napus]
Length = 1299
Score = 151 bits (382), Expect = 5e-36
Identities = 80/95 (84%), Positives = 87/95 (91%), Gaps = 5/95 (5%)
Frame = -1
Query: 582 SSRINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLP 403
SSRINTTLAVNGLTPLLIARLDHQDAIARLNLL+LIKAVYEHHP+PK+LIVENDLP++L
Sbjct: 1205 SSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPQRLQ 1264
Query: 402 NLIGERRD-----GQVLVKQMATSLLKALHIHPVL 313
NLI ERR+ GQVLVKQMATSLLKALHI+ VL
Sbjct: 1265 NLIEERREGQHLGGQVLVKQMATSLLKALHINTVL 1299
>ref|NP_187962.1| MAP3K epsilon protein kinase; protein id: At3g13530.1 [Arabidopsis
thaliana] gi|9280305|dbj|BAB01760.1| MAP3K epsilon
protein kinase [Arabidopsis thaliana]
Length = 1368
Score = 148 bits (373), Expect = 6e-35
Identities = 78/95 (82%), Positives = 85/95 (89%), Gaps = 5/95 (5%)
Frame = -1
Query: 582 SSRINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLP 403
S RIN TLAVNGLTPLLI+RLDHQDAIARLNLL+LIKAVYEHHP+PK+LIVENDLP+KL
Sbjct: 1274 SYRINKTLAVNGLTPLLISRLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPQKLQ 1333
Query: 402 NLIGERRD-----GQVLVKQMATSLLKALHIHPVL 313
NLI ERRD GQVLVKQMATSLLKALHI+ +L
Sbjct: 1334 NLIEERRDGQRSGGQVLVKQMATSLLKALHINTIL 1368
>emb|CAA12272.1| MAP3K epsilon protein kinase [Arabidopsis thaliana]
Length = 1368
Score = 148 bits (373), Expect = 6e-35
Identities = 78/95 (82%), Positives = 85/95 (89%), Gaps = 5/95 (5%)
Frame = -1
Query: 582 SSRINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLP 403
S RIN TLAVNGLTPLLI+RLDHQDAIARLNLL+LIKAVYEHHP+PK+LIVENDLP+KL
Sbjct: 1274 SYRINKTLAVNGLTPLLISRLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPQKLQ 1333
Query: 402 NLIGERRD-----GQVLVKQMATSLLKALHIHPVL 313
NLI ERRD GQVLVKQMATSLLKALHI+ +L
Sbjct: 1334 NLIEERRDGQRSGGQVLVKQMATSLLKALHINTIL 1368
>ref|NP_187455.1| putative MAP3K epsilon protein kinase; protein id: At3g07980.1
[Arabidopsis thaliana]
gi|6648210|gb|AAF21208.1|AC013483_32 putative MAP3K
epsilon protein kinase [Arabidopsis thaliana]
Length = 1367
Score = 144 bits (364), Expect = 6e-34
Identities = 77/95 (81%), Positives = 84/95 (88%), Gaps = 5/95 (5%)
Frame = -1
Query: 582 SSRINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLP 403
SS IN TLA+NGLTPLLIARLDHQDAIARLNLL+LIKAVYE HP+PK+LIVENDLP+KL
Sbjct: 1273 SSSINKTLALNGLTPLLIARLDHQDAIARLNLLKLIKAVYEKHPKPKQLIVENDLPQKLQ 1332
Query: 402 NLIGERRD-----GQVLVKQMATSLLKALHIHPVL 313
NLI ERRD GQVLVKQMATSLLKALHI+ +L
Sbjct: 1333 NLIEERRDGQRSGGQVLVKQMATSLLKALHINTIL 1367
>gb|AAL87195.1|AF480497_23 putative MAP3K epsilon protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 1264
Score = 115 bits (287), Expect = 5e-25
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = -1
Query: 582 SSRINTTLAVNGLTPLLIARLDHQDAIARLNLLRLIKAVYEHHPQPKKLIVENDLPEKLP 403
SSRINT +A NGLT LLIARLDH++AIARL LL+LIK VYEHHP+PK+LIVENDLP+KL
Sbjct: 1158 SSRINTAMATNGLTTLLIARLDHREAIARLTLLKLIKVVYEHHPRPKQLIVENDLPQKLQ 1217
Query: 402 NLIGERRDGQ 373
NLI ERRDGQ
Sbjct: 1218 NLIEERRDGQ 1227
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 483,805,587
Number of Sequences: 1393205
Number of extensions: 9998079
Number of successful extensions: 25197
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25166
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
