Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000071A_C03 KMC000071A_c03
(611 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176221.1| trehalose-6-phosphate synthase, putative; prote... 79 5e-14
ref|NP_177186.1| trehalose-6-phosphate synthase, putative; prote... 72 6e-12
ref|NP_173799.1| trehalose 6-phosphate synthase, putative; prote... 71 1e-11
gb|AAN52740.1| Putative trehalose-6-phosphate synthase [Oryza sa... 60 2e-08
pir||H71447 trehalose-6-phosphate synthase homolog DL4920W - Ara... 57 1e-07
>ref|NP_176221.1| trehalose-6-phosphate synthase, putative; protein id: At1g60140.1
[Arabidopsis thaliana] gi|7488402|pir||T02267
trehalose-6-phosphate synthase homolog T13D8.4 -
Arabidopsis thaliana gi|3249064|gb|AAC24048.1| Strong
similarity to trehalose-6-phosphate synthase homolog
gb|2245136 from A. thaliana chromosome 4 contig
gb|Z97344. [Arabidopsis thaliana]
gi|27462090|gb|AAO15312.1| trehalose-6-phosphate
synthase 3 [Arabidopsis thaliana]
Length = 861
Score = 79.0 bits (193), Expect = 5e-14
Identities = 37/62 (59%), Positives = 51/62 (81%)
Frame = -2
Query: 610 SSPSLPVAPEIFACTVGQKPSKAKYYLDDPSDVMKLLQSLSTSSNPRPRHLAQFQVSFES 431
S+ S ++ EIFACTVG+KPSKAKY+LD+ SDV+KLLQ L+ +S+P+PR+ + +VSFES
Sbjct: 800 SAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDVVKLLQGLANTSSPKPRYPSHLRVSFES 859
Query: 430 TV 425
V
Sbjct: 860 VV 861
>ref|NP_177186.1| trehalose-6-phosphate synthase, putative; protein id: At1g70290.1
[Arabidopsis thaliana] gi|7488401|pir||T01494
trehalose-6-phosphate synthase homolog F17O7.18 -
Arabidopsis thaliana gi|3176687|gb|AAC18810.1| Strong
similarity to trehalose-6-phosphate synthase homolog
from A. thaliana chromosome 4 contig gb|Z97344. ESTs
gb|H37594, gb|R65023, gb|H37578 and gb|R64855 come from
this gene. [Arabidopsis thaliana]
gi|27462088|gb|AAO15311.1| trehalose-6-phosphate
synthase 2 [Arabidopsis thaliana]
Length = 826
Score = 72.0 bits (175), Expect = 6e-12
Identities = 35/62 (56%), Positives = 46/62 (73%)
Frame = -2
Query: 610 SSPSLPVAPEIFACTVGQKPSKAKYYLDDPSDVMKLLQSLSTSSNPRPRHLAQFQVSFES 431
++P L V PE+FACTVG+KPSKAKY+LDD +DV+KLL+ L SS+ + QV+FES
Sbjct: 765 TNPELLVQPEVFACTVGRKPSKAKYFLDDEADVLKLLRGLGDSSSSLKPSSSHTQVAFES 824
Query: 430 TV 425
V
Sbjct: 825 IV 826
>ref|NP_173799.1| trehalose 6-phosphate synthase, putative; protein id: At1g23870.1,
supported by cDNA: gi_18176366, supported by cDNA:
gi_20465286 [Arabidopsis thaliana]
gi|9369388|gb|AAF87136.1|AC002423_1 T23E23.3 [Arabidopsis
thaliana] gi|18176367|gb|AAL60031.1| putative trehalose
6-phosphate synthase [Arabidopsis thaliana]
gi|20465287|gb|AAM20007.1| putative trehalose 6-phosphate
synthase [Arabidopsis thaliana]
Length = 867
Score = 70.9 bits (172), Expect = 1e-11
Identities = 37/68 (54%), Positives = 50/68 (73%), Gaps = 6/68 (8%)
Frame = -2
Query: 610 SSPSLPVAPEIFACTVGQKPSKAKYYLDDPSDVMKLLQSL-STSSNPRPRHLAQ-----F 449
++P LP+ PEIFACTVG+KPSKAKY+LDD SDV+KLL L + +S+ +P + Q
Sbjct: 800 TNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDVLKLLGGLAAATSSSKPEYQQQSSSLHT 859
Query: 448 QVSFESTV 425
QV+FES +
Sbjct: 860 QVAFESII 867
>gb|AAN52740.1| Putative trehalose-6-phosphate synthase [Oryza sativa (japonica
cultivar-group)]
Length = 860
Score = 60.1 bits (144), Expect = 2e-08
Identities = 27/46 (58%), Positives = 36/46 (77%)
Frame = -2
Query: 601 SLPVAPEIFACTVGQKPSKAKYYLDDPSDVMKLLQSLSTSSNPRPR 464
SL E+FACTVG+KPSKAKYYLDD ++V++L+Q L++ SN R
Sbjct: 805 SLAATAEVFACTVGRKPSKAKYYLDDTAEVVRLMQGLASVSNELAR 850
>pir||H71447 trehalose-6-phosphate synthase homolog DL4920W - Arabidopsis
thaliana gi|2245136|emb|CAB10557.1|
trehalose-6-phosphate synthase like protein [Arabidopsis
thaliana] gi|7268530|emb|CAB78780.1|
trehalose-6-phosphate synthase like protein [Arabidopsis
thaliana]
Length = 865
Score = 57.4 bits (137), Expect = 1e-07
Identities = 24/42 (57%), Positives = 34/42 (80%)
Frame = -2
Query: 604 PSLPVAPEIFACTVGQKPSKAKYYLDDPSDVMKLLQSLSTSS 479
P+L EIFACTVGQKPSKAKYYLDD ++++++L L+ ++
Sbjct: 805 PALSPVAEIFACTVGQKPSKAKYYLDDTAEIIRMLDGLAATN 846
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 540,955,128
Number of Sequences: 1393205
Number of extensions: 11548082
Number of successful extensions: 22811
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 22147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22797
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24568846532
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
