Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000066A_C01 KMC000066A_c01
(719 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_568458.1| putative protein; protein id: At5g24810.1, supp... 146 3e-34
ref|NP_216979.1| lipP [Mycobacterium tuberculosis H37Rv] gi|1584... 38 0.12
ref|NP_419074.1| esterase A [Caulobacter crescentus CB15] gi|253... 35 0.81
gb|AAL73134.1|AF228666_1 carboxylesterase [Pseudomonas fluorescens] 35 0.81
prf||2006221A carboxylesterase 35 0.81
>ref|NP_568458.1| putative protein; protein id: At5g24810.1, supported by cDNA:
gi_16649082 [Arabidopsis thaliana]
gi|16649083|gb|AAL24393.1| Unknown protein [Arabidopsis
thaliana]
Length = 1009
Score = 146 bits (368), Expect = 3e-34
Identities = 73/118 (61%), Positives = 88/118 (73%)
Frame = -2
Query: 682 VYRNPRIIDEFLGAGECENLALPNGGFGLGFKRLSSNNGSSIAFGHSGMGGSTGFCDVTN 503
++ NPRI D F+GAG+ L +P+G FGLGFKR S +GS + FGHSG+GGSTGFCD+ N
Sbjct: 898 MFSNPRIHDAFMGAGDYSGLVVPDGKFGLGFKRAISQDGSLVGFGHSGLGGSTGFCDINN 957
Query: 502 RFAIAVTLNKMSFGGVSAKIVQLVCSELQIPVPDDFLRFMAQQSGQDEQLSLGRPLIN 329
RF+IAVTLNKMS GGV+A IV+LVCSEL IP+P DF A G D Q +G PLIN
Sbjct: 958 RFSIAVTLNKMSMGGVTANIVKLVCSELNIPLPKDF----ATDIGADSQ--MGTPLIN 1009
>ref|NP_216979.1| lipP [Mycobacterium tuberculosis H37Rv]
gi|15841987|ref|NP_337024.1| esterase [Mycobacterium
tuberculosis CDC1551] gi|7478005|pir||F70865 probable
esterase - Mycobacterium tuberculosis (strain H37RV)
gi|2791503|emb|CAA16040.1| lipP [Mycobacterium
tuberculosis H37Rv] gi|13882262|gb|AAK46838.1| esterase
[Mycobacterium tuberculosis CDC1551]
Length = 394
Score = 38.1 bits (87), Expect = 0.12
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -2
Query: 607 GFGLGF--KRLSSNNGSSIAFGHSGMGGSTGFCDVTNRFAIAVTLNK 473
G+GLG+ + N + FGH G+GGS GF D+ +R A +N+
Sbjct: 320 GWGLGYMLNQRGVNGPNPRIFGHGGLGGSFGFVDLEHRIGYAYVMNR 366
>ref|NP_419074.1| esterase A [Caulobacter crescentus CB15] gi|25399565|pir||F87280
esterase A [imported] - Caulobacter crescentus
gi|13421388|gb|AAK22242.1| esterase A [Caulobacter
crescentus CB15]
Length = 374
Score = 35.4 bits (80), Expect = 0.81
Identities = 20/47 (42%), Positives = 25/47 (52%), Gaps = 3/47 (6%)
Frame = -2
Query: 604 FGLGFKRLSSN---NGSSIAFGHSGMGGSTGFCDVTNRFAIAVTLNK 473
+G GF R N ++ AFGHSG GGS F D T + A +NK
Sbjct: 306 WGAGFMRNEPNFYYGPTAEAFGHSGWGGSCAFADPTRGVSGAYVMNK 352
>gb|AAL73134.1|AF228666_1 carboxylesterase [Pseudomonas fluorescens]
Length = 377
Score = 35.4 bits (80), Expect = 0.81
Identities = 20/50 (40%), Positives = 23/50 (46%)
Frame = -2
Query: 619 LPNGGFGLGFKRLSSNNGSSIAFGHSGMGGSTGFCDVTNRFAIAVTLNKM 470
LPN FGLG + AFGH G GGS GF D + A N +
Sbjct: 317 LPNATFGLGPR----------AFGHPGAGGSVGFADPEHDVAFGFVTNTL 356
>prf||2006221A carboxylesterase
Length = 382
Score = 35.4 bits (80), Expect = 0.81
Identities = 20/50 (40%), Positives = 23/50 (46%)
Frame = -2
Query: 619 LPNGGFGLGFKRLSSNNGSSIAFGHSGMGGSTGFCDVTNRFAIAVTLNKM 470
LPN FGLG + AFGH G GGS GF D + A N +
Sbjct: 322 LPNATFGLGPR----------AFGHPGAGGSVGFADPEHDVAFGFVTNTL 361
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 611,767,402
Number of Sequences: 1393205
Number of extensions: 13590866
Number of successful extensions: 32811
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 30866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32720
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 33499052993
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
