Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000064A_C01 KMC000064A_c01
(621 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196317.1| steroid sulfotransferase-like protein; protein ... 35 1.0
dbj|BAC41878.1| putative steroid sulfotransferase [Arabidopsis t... 35 1.0
>ref|NP_196317.1| steroid sulfotransferase-like protein; protein id: At5g07000.1
[Arabidopsis thaliana] gi|9759556|dbj|BAB11158.1|
steroid sulfotransferase-like protein [Arabidopsis
thaliana]
Length = 340
Score = 34.7 bits (78), Expect = 1.0
Identities = 24/73 (32%), Positives = 34/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 237 LHAFQLNKTPQKSVQRISS-NNHGWNLPGRL*PSGVISNCTTWSFLLVATKFILHFFFPI 413
L+ FQ + K +Q I+S H +LP + + + + TTW L T H F P+
Sbjct: 43 LYLFQGFRCQAKEIQAITSFQKHFQSLPDDVVLATIPKSGTTWLKALTFTILTRHRFDPV 102
Query: 414 CSCSGSQPHCTSN 452
S S P TSN
Sbjct: 103 SSSSSDHPLLTSN 115
>dbj|BAC41878.1| putative steroid sulfotransferase [Arabidopsis thaliana]
Length = 347
Score = 34.7 bits (78), Expect = 1.0
Identities = 24/73 (32%), Positives = 34/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 237 LHAFQLNKTPQKSVQRISS-NNHGWNLPGRL*PSGVISNCTTWSFLLVATKFILHFFFPI 413
L+ FQ + K +Q I+S H +LP + + + + TTW L T H F P+
Sbjct: 50 LYLFQGFRCQAKEIQAITSFQKHFQSLPDDVVLATIPKSGTTWLKALTFTILTRHRFDPV 109
Query: 414 CSCSGSQPHCTSN 452
S S P TSN
Sbjct: 110 SSSSSDHPLLTSN 122
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 548,477,798
Number of Sequences: 1393205
Number of extensions: 12286009
Number of successful extensions: 23573
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23566
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25017613016
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
