Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000063A_C02 KMC000063A_c02
(1269 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C86423 unknown protein, 14666-16092 [imported] - Arabidopsi... 51 3e-05
ref|NP_564342.1| unknown protein; protein id: At1g29950.1 [Arabi... 51 3e-05
ref|NP_196508.1| putative protein; protein id: At5g09460.1 [Arab... 49 2e-04
ref|NP_199812.1| unknown protein; protein id: At5g50010.1 [Arabi... 48 3e-04
ref|NP_201239.1| unknown protein; protein id: At5g64340.1, suppo... 47 8e-04
>pir||C86423 unknown protein, 14666-16092 [imported] - Arabidopsis thaliana
gi|9972351|gb|AAG10601.1|AC008030_1 Unknown protein
[Arabidopsis thaliana]
gi|12324164|gb|AAG52051.1|AC022455_5 unknown protein;
14666-16092 [Arabidopsis thaliana]
Length = 285
Score = 51.2 bits (121), Expect = 3e-05
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Frame = -2
Query: 1241 DGDAYGDHMQFMDTANSLNPNRPIDIEDDDAESRCSS-----DNFSQGEMGSLTG----- 1092
+G+ G + + TA + + D + AES CSS +N + SL+G
Sbjct: 171 EGEEDGGDSEEVSTARTSSR----DYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSASSS 226
Query: 1091 -NKKMRKEKIQDVLSVLQHIVPGGKDKDPIQLLDEAIRCLKSLKVKARALGL 939
N ++K++ ++ VL+ IVPGG+ + +LDEA++ LKSLK++A+ LG+
Sbjct: 227 NNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGV 278
>ref|NP_564342.1| unknown protein; protein id: At1g29950.1 [Arabidopsis thaliana]
gi|13605563|gb|AAK32775.1|AF361607_1 F1N18.24/F1N18.24
[Arabidopsis thaliana] gi|18491145|gb|AAL69541.1|
F1N18.24/F1N18.24 [Arabidopsis thaliana]
Length = 251
Score = 51.2 bits (121), Expect = 3e-05
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 11/112 (9%)
Frame = -2
Query: 1241 DGDAYGDHMQFMDTANSLNPNRPIDIEDDDAESRCSS-----DNFSQGEMGSLTG----- 1092
+G+ G + + TA + + D + AES CSS +N + SL+G
Sbjct: 137 EGEEDGGDSEEVSTARTSSR----DYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSASSS 192
Query: 1091 -NKKMRKEKIQDVLSVLQHIVPGGKDKDPIQLLDEAIRCLKSLKVKARALGL 939
N ++K++ ++ VL+ IVPGG+ + +LDEA++ LKSLK++A+ LG+
Sbjct: 193 NNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGV 244
>ref|NP_196508.1| putative protein; protein id: At5g09460.1 [Arabidopsis thaliana]
gi|9955533|emb|CAC05472.1| putative protein [Arabidopsis
thaliana] gi|22135920|gb|AAM91542.1| putative protein
[Arabidopsis thaliana] gi|23197602|gb|AAN15328.1|
putative protein [Arabidopsis thaliana]
Length = 326
Score = 48.9 bits (115), Expect = 2e-04
Identities = 27/62 (43%), Positives = 39/62 (62%)
Frame = -2
Query: 1148 ESRCSSDNFSQGEMGSLTGNKKMRKEKIQDVLSVLQHIVPGGKDKDPIQLLDEAIRCLKS 969
E+ S+ S+ E GS +++ RK+KI L +L+ +VPG K K+ + LLDEAI LK
Sbjct: 252 ENLPESNISSKQETGSGLSDEQSRKDKIHTALRILESVVPGAKGKEALLLLDEAIDYLKL 311
Query: 968 LK 963
LK
Sbjct: 312 LK 313
>ref|NP_199812.1| unknown protein; protein id: At5g50010.1 [Arabidopsis thaliana]
gi|10177212|dbj|BAB10287.1| gene_id:MPF21.2~unknown
protein [Arabidopsis thaliana]
gi|26449412|dbj|BAC41833.1| unknown protein [Arabidopsis
thaliana] gi|28950883|gb|AAO63365.1| At5g50010
[Arabidopsis thaliana]
Length = 311
Score = 48.1 bits (113), Expect = 3e-04
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = -2
Query: 1154 DAESRCSS-DN--FSQGEMGSLTGNKKMRKEKIQDVLSVLQHIVPGGKDKDPIQLLDEAI 984
DAES C S DN S + L+ NK + +EKI + +S+L+ +VPG + DPI ++D AI
Sbjct: 238 DAESSCGSCDNTRISFLKRSKLSSNK-IGEEKIFETVSLLRSVVPGEELVDPILVIDRAI 296
Query: 983 RCLKSLKVKAR 951
LKSLK++A+
Sbjct: 297 DYLKSLKMEAK 307
>ref|NP_201239.1| unknown protein; protein id: At5g64340.1, supported by cDNA:
gi_17064969 [Arabidopsis thaliana]
gi|17064970|gb|AAL32639.1| Unknown protein [Arabidopsis
thaliana] gi|20259970|gb|AAM13332.1| unknown protein
[Arabidopsis thaliana]
Length = 348
Score = 46.6 bits (109), Expect = 8e-04
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = -2
Query: 1268 GEAKKRKRADG-DAYGDHMQFMDTANSLNPNRPIDIEDDDA-ESRCSSDNFSQGEMGSLT 1095
G K++K D + D + T +S N ++D ES+ S ++ + GS
Sbjct: 210 GPCKRQKLLDKVNNISDLSSLVGTESSTQLNGSSFLKDKKLPESKTIS---TKEDTGSGL 266
Query: 1094 GNKKMRKEKIQDVLSVLQHIVPGGKDKDPIQLLDEAIRCLKSLK 963
N++ +K+KI+ L +L+ +VPG K + + LLDEAI LK LK
Sbjct: 267 SNEQSKKDKIRTALKILESVVPGAKGNEALLLLDEAIDYLKLLK 310
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,120,158,830
Number of Sequences: 1393205
Number of extensions: 25870689
Number of successful extensions: 180895
Number of sequences better than 10.0: 141
Number of HSP's better than 10.0 without gapping: 73426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143968
length of database: 448,689,247
effective HSP length: 126
effective length of database: 273,145,417
effective search space used: 80851043432
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
