Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000051A_C01 KMC000051A_c01
(537 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566681.1| expressed protein; protein id: At3g21290.1, sup... 132 2e-30
gb|AAK64031.1| unknown protein [Arabidopsis thaliana] 132 2e-30
dbj|BAB01722.1| gene_id:MXL8.16~unknown protein [Arabidopsis tha... 95 5e-19
gb|AAL13036.1| ELL [Drosophila melanogaster] 42 0.006
ref|NP_649155.2| CG32217-PA [Drosophila melanogaster] gi|2309309... 42 0.006
>ref|NP_566681.1| expressed protein; protein id: At3g21290.1, supported by cDNA:
gi_14532605 [Arabidopsis thaliana]
Length = 1192
Score = 132 bits (333), Expect = 2e-30
Identities = 64/109 (58%), Positives = 87/109 (79%)
Frame = -1
Query: 537 ELKGPIMTFSPYKEYVPEYGDKYDSYCSLYQILESYRNEFQQLGDDLVYAKGRDMDRYYD 358
ELKGPI YK Y+ EY DKYDSY S+ +ILES+RN+FQ+LG DL +AKGRD++RY
Sbjct: 1086 ELKGPISDHLQYKAYMQEYNDKYDSYHSINKILESHRNDFQKLGQDLGFAKGRDVERYNK 1145
Query: 357 ILEQLKESYRRCGPLQRHKRLKKIFVVLHPELENIQLRIQDFAHSYSKE 211
I+EQ+KESY + G +RHKRLKK+FVVLH EL++++ R++D+A S+ K+
Sbjct: 1146 IVEQIKESYCKYG--ERHKRLKKVFVVLHEELKHLKQRMRDYASSHGKD 1192
>gb|AAK64031.1| unknown protein [Arabidopsis thaliana]
Length = 1192
Score = 132 bits (333), Expect = 2e-30
Identities = 64/109 (58%), Positives = 87/109 (79%)
Frame = -1
Query: 537 ELKGPIMTFSPYKEYVPEYGDKYDSYCSLYQILESYRNEFQQLGDDLVYAKGRDMDRYYD 358
ELKGPI YK Y+ EY DKYDSY S+ +ILES+RN+FQ+LG DL +AKGRD++RY
Sbjct: 1086 ELKGPISDHLQYKAYMQEYNDKYDSYHSINKILESHRNDFQKLGQDLGFAKGRDVERYNK 1145
Query: 357 ILEQLKESYRRCGPLQRHKRLKKIFVVLHPELENIQLRIQDFAHSYSKE 211
I+EQ+KESY + G +RHKRLKK+FVVLH EL++++ R++D+A S+ K+
Sbjct: 1146 IVEQIKESYCKYG--ERHKRLKKVFVVLHEELKHLKQRMRDYASSHGKD 1192
>dbj|BAB01722.1| gene_id:MXL8.16~unknown protein [Arabidopsis thaliana]
Length = 1261
Score = 95.1 bits (235), Expect = 5e-19
Identities = 45/73 (61%), Positives = 57/73 (77%)
Frame = -1
Query: 537 ELKGPIMTFSPYKEYVPEYGDKYDSYCSLYQILESYRNEFQQLGDDLVYAKGRDMDRYYD 358
ELKGPI YK Y+ EY DKYDSY S+ +ILES+RN+FQ+LG DL +AKGRD++RY
Sbjct: 1183 ELKGPISDHLQYKAYMQEYNDKYDSYHSINKILESHRNDFQKLGQDLGFAKGRDVERYNK 1242
Query: 357 ILEQLKESYRRCG 319
I+EQ+KESY + G
Sbjct: 1243 IVEQIKESYCKYG 1255
>gb|AAL13036.1| ELL [Drosophila melanogaster]
Length = 1060
Score = 41.6 bits (96), Expect = 0.006
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = -1
Query: 525 PIMTFSPYKEYVPEYGDKYDSYCSLYQILESYRNEFQQLGDDLVYAKGRD--MDRYYDIL 352
PI T + Y E+ YD Y L +E RN FQ L + L A+ D Y I
Sbjct: 836 PIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLESARRCDNGYGDYDHIK 895
Query: 351 EQLKESYRRCGPLQRHKRLKKIFVVLHPELENIQLRIQDF 232
Q+ Y R + K+ F LH +L +I+ + D+
Sbjct: 896 RQIVCEYERINNDRTIGEDKERFDYLHAKLAHIKQLVMDY 935
>ref|NP_649155.2| CG32217-PA [Drosophila melanogaster] gi|23093097|gb|AAF49098.2|
CG32217-PA [Drosophila melanogaster]
Length = 625
Score = 41.6 bits (96), Expect = 0.006
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = -1
Query: 525 PIMTFSPYKEYVPEYGDKYDSYCSLYQILESYRNEFQQLGDDLVYAKGRD--MDRYYDIL 352
PI T + Y E+ YD Y L +E RN FQ L + L A+ D Y I
Sbjct: 401 PIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLESARRCDNGYGDYDHIK 460
Query: 351 EQLKESYRRCGPLQRHKRLKKIFVVLHPELENIQLRIQDF 232
Q+ Y R + K+ F LH +L +I+ + D+
Sbjct: 461 RQIVCEYERINNDRTIGEDKERFDYLHAKLAHIKQLVMDY 500
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 458,483,521
Number of Sequences: 1393205
Number of extensions: 9612023
Number of successful extensions: 26523
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 25812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26465
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
