Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000014A_C01 KMC000014A_c01
(688 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O24301|SUS2_PEA Sucrose synthase 2 (Sucrose-UDP glucosyltrans... 192 5e-48
dbj|BAB20799.1| sucrose synthase 1 [Pyrus pyrifolia] 184 1e-45
ref|NP_192137.1| sucrose synthase, putative; protein id: At4g022... 183 2e-45
dbj|BAA88904.1| sucrose synthase [Citrus unshiu] 181 1e-44
gb|AAM22755.1| sucrose synthase [Deschampsia antarctica] 180 1e-44
>sp|O24301|SUS2_PEA Sucrose synthase 2 (Sucrose-UDP glucosyltransferase 2)
gi|7433834|pir||T06497 probable sucrose synthase (EC
2.4.1.13) 2 - garden pea gi|2570067|emb|CAA04512.1|
second sucrose synthase [Pisum sativum]
Length = 809
Score = 192 bits (487), Expect = 5e-48
Identities = 87/97 (89%), Positives = 93/97 (95%)
Frame = -1
Query: 688 FHIDPYHPDQASNLLXEFFQRCKEDPSHWNKISDXGLQRIYERYTWKIYSERLMTLAGVY 509
FHIDPYHPDQAS LL +FFQRCKEDP+HWNK+SD GLQRIYERYTWKIYSERLMTLAGVY
Sbjct: 712 FHIDPYHPDQASELLVDFFQRCKEDPNHWNKVSDGGLQRIYERYTWKIYSERLMTLAGVY 771
Query: 508 GFWKHVSELERRETRRYLEMFYILKFRDLANSVPLAK 398
FWK+VS+LERRETRRYLEMFYILKFRDLANSVP+AK
Sbjct: 772 SFWKYVSKLERRETRRYLEMFYILKFRDLANSVPIAK 808
>dbj|BAB20799.1| sucrose synthase 1 [Pyrus pyrifolia]
Length = 812
Score = 184 bits (466), Expect = 1e-45
Identities = 84/100 (84%), Positives = 93/100 (93%)
Frame = -1
Query: 688 FHIDPYHPDQASNLLXEFFQRCKEDPSHWNKISDXGLQRIYERYTWKIYSERLMTLAGVY 509
FHIDPYHP++A+ L+ +FFQRCKEDPS+WN ISD GLQRIYE+YTWKIYSERLMTLAGVY
Sbjct: 712 FHIDPYHPEKAAALMADFFQRCKEDPSYWNTISDAGLQRIYEKYTWKIYSERLMTLAGVY 771
Query: 508 GFWKHVSELERRETRRYLEMFYILKFRDLANSVPLAKDDA 389
GFWK+VS+LERRETRRYLEMFYILKFRDLA SVP A DDA
Sbjct: 772 GFWKYVSKLERRETRRYLEMFYILKFRDLAKSVPEAIDDA 811
>ref|NP_192137.1| sucrose synthase, putative; protein id: At4g02280.1, supported by
cDNA: gi_15293134, supported by cDNA: gi_15982720
[Arabidopsis thaliana] gi|25286731|pir||B85029 probable
sucrose synthetase [imported] - Arabidopsis thaliana
gi|7268988|emb|CAB80721.1| putative sucrose synthetase
[Arabidopsis thaliana] gi|15293135|gb|AAK93678.1|
putative sucrose synthetase [Arabidopsis thaliana]
gi|15982721|gb|AAL09730.1| AT4g02280/T2H3_8 [Arabidopsis
thaliana] gi|23296413|gb|AAN13112.1| putative sucrose
synthetase [Arabidopsis thaliana]
Length = 809
Score = 183 bits (465), Expect = 2e-45
Identities = 80/99 (80%), Positives = 90/99 (90%)
Frame = -1
Query: 688 FHIDPYHPDQASNLLXEFFQRCKEDPSHWNKISDXGLQRIYERYTWKIYSERLMTLAGVY 509
FHIDPYHP+QA N++ +FF+RCKEDP+HW K+SD GLQRIYERYTWKIYSERLMTLAGVY
Sbjct: 711 FHIDPYHPEQAGNIMADFFERCKEDPNHWKKVSDAGLQRIYERYTWKIYSERLMTLAGVY 770
Query: 508 GFWKHVSELERRETRRYLEMFYILKFRDLANSVPLAKDD 392
GFWK+VS+LERRETRRYLEMFYILKFRDL +VP DD
Sbjct: 771 GFWKYVSKLERRETRRYLEMFYILKFRDLVKTVPSTADD 809
>dbj|BAA88904.1| sucrose synthase [Citrus unshiu]
Length = 811
Score = 181 bits (458), Expect = 1e-44
Identities = 81/99 (81%), Positives = 91/99 (91%)
Frame = -1
Query: 688 FHIDPYHPDQASNLLXEFFQRCKEDPSHWNKISDXGLQRIYERYTWKIYSERLMTLAGVY 509
FHIDPYHPDQA+ L+ +FF +CKE+PSHW KISD GL+RIYERYTWKIYSERLMTLAGVY
Sbjct: 711 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770
Query: 508 GFWKHVSELERRETRRYLEMFYILKFRDLANSVPLAKDD 392
GFWK+VS+LERRETRRYLEMFYILKFRDL SVPLA ++
Sbjct: 771 GFWKYVSKLERRETRRYLEMFYILKFRDLVKSVPLASEN 809
>gb|AAM22755.1| sucrose synthase [Deschampsia antarctica]
Length = 159
Score = 180 bits (457), Expect = 1e-44
Identities = 80/100 (80%), Positives = 93/100 (93%)
Frame = -1
Query: 688 FHIDPYHPDQASNLLXEFFQRCKEDPSHWNKISDXGLQRIYERYTWKIYSERLMTLAGVY 509
FHIDPYHPDQA+ L+ +FF++CK+DP+HW KISD GLQRIY++YTWKIYSERLMTLAGVY
Sbjct: 59 FHIDPYHPDQAATLMVDFFEQCKQDPNHWVKISDRGLQRIYDKYTWKIYSERLMTLAGVY 118
Query: 508 GFWKHVSELERRETRRYLEMFYILKFRDLANSVPLAKDDA 389
GFWK+VS+LERRETRRYLEMFYILKFR+L SVPLA D+A
Sbjct: 119 GFWKYVSKLERRETRRYLEMFYILKFRELVKSVPLALDEA 158
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 569,301,845
Number of Sequences: 1393205
Number of extensions: 11910511
Number of successful extensions: 27197
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 26482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27165
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 30835865868
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
