Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000007A_C02 KMC000007A_c02
(606 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB02957.1| zinc metalloprotease (insulinase family) [Arabid... 246 2e-64
ref|NP_188548.2| metalloprotease, putative; protein id: At3g1917... 246 2e-64
pir||A96533 probable zinc metalloproteinase [imported] - Arabido... 241 4e-63
gb|AAG13049.1|AC011807_8 Putative zinc metalloprotease [Arabidop... 241 4e-63
ref|NP_175386.2| hydrogenase protein, putative; protein id: At1g... 241 4e-63
>dbj|BAB02957.1| zinc metalloprotease (insulinase family) [Arabidopsis thaliana]
Length = 1052
Score = 246 bits (628), Expect = 2e-64
Identities = 115/142 (80%), Positives = 134/142 (93%)
Frame = -3
Query: 604 YGGFCDFDTHSGVFSFLSYRDPNLLKTLDVYDGTGDFLRELEIDDDTLTKAIIGTIGDVD 425
YGGFCDFD+HSGVFS+LSYRDPNLLKTLD+YDGTGDFLR L++D +TLTKAIIGTIGDVD
Sbjct: 911 YGGFCDFDSHSGVFSYLSYRDPNLLKTLDIYDGTGDFLRGLDVDQETLTKAIIGTIGDVD 970
Query: 424 SYQLPDAKGYSSLLRHLLGITEEERQRRREEILSTSVKDFRNFIDAMEAVKDKGIVVAVA 245
SYQLPDAKGYSSLLRHLLG+T+EERQR+REEIL+TS+KDF++F A++ V+DKG+ VAVA
Sbjct: 971 SYQLPDAKGYSSLLRHLLGVTDEERQRKREEILTTSLKDFKDFAQAIDVVRDKGVAVAVA 1030
Query: 244 SPEDVDAANKERSNFFQVKKAL 179
S ED+DAAN ERSNFF+VKKAL
Sbjct: 1031 SAEDIDAANNERSNFFEVKKAL 1052
>ref|NP_188548.2| metalloprotease, putative; protein id: At3g19170.1, supported by
cDNA: gi_19699072, supported by cDNA: gi_20259503
[Arabidopsis thaliana] gi|19699073|gb|AAL90904.1|
AT3g19170/MVI11_8 [Arabidopsis thaliana]
gi|20259504|gb|AAM13872.1| putative metalloprotease
[Arabidopsis thaliana] gi|26983906|gb|AAN86205.1|
putative metalloprotease [Arabidopsis thaliana]
Length = 1080
Score = 246 bits (628), Expect = 2e-64
Identities = 115/142 (80%), Positives = 134/142 (93%)
Frame = -3
Query: 604 YGGFCDFDTHSGVFSFLSYRDPNLLKTLDVYDGTGDFLRELEIDDDTLTKAIIGTIGDVD 425
YGGFCDFD+HSGVFS+LSYRDPNLLKTLD+YDGTGDFLR L++D +TLTKAIIGTIGDVD
Sbjct: 939 YGGFCDFDSHSGVFSYLSYRDPNLLKTLDIYDGTGDFLRGLDVDQETLTKAIIGTIGDVD 998
Query: 424 SYQLPDAKGYSSLLRHLLGITEEERQRRREEILSTSVKDFRNFIDAMEAVKDKGIVVAVA 245
SYQLPDAKGYSSLLRHLLG+T+EERQR+REEIL+TS+KDF++F A++ V+DKG+ VAVA
Sbjct: 999 SYQLPDAKGYSSLLRHLLGVTDEERQRKREEILTTSLKDFKDFAQAIDVVRDKGVAVAVA 1058
Query: 244 SPEDVDAANKERSNFFQVKKAL 179
S ED+DAAN ERSNFF+VKKAL
Sbjct: 1059 SAEDIDAANNERSNFFEVKKAL 1080
>pir||A96533 probable zinc metalloproteinase [imported] - Arabidopsis thaliana
Length = 1077
Score = 241 bits (616), Expect = 4e-63
Identities = 114/141 (80%), Positives = 132/141 (92%)
Frame = -3
Query: 604 YGGFCDFDTHSGVFSFLSYRDPNLLKTLDVYDGTGDFLRELEIDDDTLTKAIIGTIGDVD 425
YGG CDFD+HSGVFSFLSYRDPNLLKTLD+YDGTGDFLR L++D+DTLTKAIIGTIGDVD
Sbjct: 935 YGGSCDFDSHSGVFSFLSYRDPNLLKTLDIYDGTGDFLRGLDVDEDTLTKAIIGTIGDVD 994
Query: 424 SYQLPDAKGYSSLLRHLLGITEEERQRRREEILSTSVKDFRNFIDAMEAVKDKGIVVAVA 245
SYQLPDAKGY+SLLRHLL +T+EERQ RREEILSTS+KDF+ F +A+++V DKG+ VAVA
Sbjct: 995 SYQLPDAKGYTSLLRHLLNVTDEERQIRREEILSTSLKDFKEFAEAIDSVSDKGVAVAVA 1054
Query: 244 SPEDVDAANKERSNFFQVKKA 182
S ED+DAAN+ERSNFF+VKKA
Sbjct: 1055 SQEDIDAANRERSNFFEVKKA 1075
>gb|AAG13049.1|AC011807_8 Putative zinc metalloprotease [Arabidopsis thaliana]
Length = 1077
Score = 241 bits (616), Expect = 4e-63
Identities = 114/141 (80%), Positives = 132/141 (92%)
Frame = -3
Query: 604 YGGFCDFDTHSGVFSFLSYRDPNLLKTLDVYDGTGDFLRELEIDDDTLTKAIIGTIGDVD 425
YGG CDFD+HSGVFSFLSYRDPNLLKTLD+YDGTGDFLR L++D+DTLTKAIIGTIGDVD
Sbjct: 935 YGGSCDFDSHSGVFSFLSYRDPNLLKTLDIYDGTGDFLRGLDVDEDTLTKAIIGTIGDVD 994
Query: 424 SYQLPDAKGYSSLLRHLLGITEEERQRRREEILSTSVKDFRNFIDAMEAVKDKGIVVAVA 245
SYQLPDAKGY+SLLRHLL +T+EERQ RREEILSTS+KDF+ F +A+++V DKG+ VAVA
Sbjct: 995 SYQLPDAKGYTSLLRHLLNVTDEERQIRREEILSTSLKDFKEFAEAIDSVSDKGVAVAVA 1054
Query: 244 SPEDVDAANKERSNFFQVKKA 182
S ED+DAAN+ERSNFF+VKKA
Sbjct: 1055 SQEDIDAANRERSNFFEVKKA 1075
>ref|NP_175386.2| hydrogenase protein, putative; protein id: At1g49630.1, supported by
cDNA: gi_18377703 [Arabidopsis thaliana]
gi|18377704|gb|AAL67002.1| putative hydrogenase protein
[Arabidopsis thaliana] gi|28393925|gb|AAO42370.1|
putative hydrogenase [Arabidopsis thaliana]
Length = 1080
Score = 241 bits (616), Expect = 4e-63
Identities = 114/141 (80%), Positives = 132/141 (92%)
Frame = -3
Query: 604 YGGFCDFDTHSGVFSFLSYRDPNLLKTLDVYDGTGDFLRELEIDDDTLTKAIIGTIGDVD 425
YGG CDFD+HSGVFSFLSYRDPNLLKTLD+YDGTGDFLR L++D+DTLTKAIIGTIGDVD
Sbjct: 938 YGGSCDFDSHSGVFSFLSYRDPNLLKTLDIYDGTGDFLRGLDVDEDTLTKAIIGTIGDVD 997
Query: 424 SYQLPDAKGYSSLLRHLLGITEEERQRRREEILSTSVKDFRNFIDAMEAVKDKGIVVAVA 245
SYQLPDAKGY+SLLRHLL +T+EERQ RREEILSTS+KDF+ F +A+++V DKG+ VAVA
Sbjct: 998 SYQLPDAKGYTSLLRHLLNVTDEERQIRREEILSTSLKDFKEFAEAIDSVSDKGVAVAVA 1057
Query: 244 SPEDVDAANKERSNFFQVKKA 182
S ED+DAAN+ERSNFF+VKKA
Sbjct: 1058 SQEDIDAANRERSNFFEVKKA 1078
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 497,947,488
Number of Sequences: 1393205
Number of extensions: 10707148
Number of successful extensions: 32021
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 30393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31939
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
