Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000005A_C01 KMC000005A_c01
(606 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC20364.1| phosphoenolpyruvate carboxylase [Lotus japonicus] 323 8e-88
gb|AAD31452.1|AF135371_1 phosphoenol pyruvate carboxylase [Lotus... 323 8e-88
sp|Q9AU12|CAPP_PHAVU Phosphoenolpyruvate carboxylase (PEPCase) g... 309 2e-83
dbj|BAA23419.1| phosphoenolpyruvate carboxylase [Glycine max] 308 3e-83
dbj|BAC41249.1| phosphoenolpyruvate carboxylase [Glycine max] 308 3e-83
>dbj|BAC20364.1| phosphoenolpyruvate carboxylase [Lotus japonicus]
Length = 961
Score = 323 bits (829), Expect = 8e-88
Identities = 168/169 (99%), Positives = 168/169 (99%)
Frame = +2
Query: 98 MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEV 277
MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEV
Sbjct: 1 MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEV 60
Query: 278 YELSAEYERKHDHEKLEELGKVITSLDAGDSIVVAKSFSHMLNLANLAEEVQISRRRRNK 457
YELSAEYERKHDHEKLEELGKVITSLDAGDSIVVAKSFSHMLNLANLAEEVQISRRRRNK
Sbjct: 61 YELSAEYERKHDHEKLEELGKVITSLDAGDSIVVAKSFSHMLNLANLAEEVQISRRRRNK 120
Query: 458 LKKGDFADENNATTESDIEETLKKLVFKLKKSPQEVFDCLKNQTVDLVL 604
LKKGDFADENNATTESDIEETLKKLVFKLKKSPQEVFD LKNQTVDLVL
Sbjct: 121 LKKGDFADENNATTESDIEETLKKLVFKLKKSPQEVFDALKNQTVDLVL 169
>gb|AAD31452.1|AF135371_1 phosphoenol pyruvate carboxylase [Lotus corniculatus]
Length = 957
Score = 323 bits (829), Expect = 8e-88
Identities = 168/169 (99%), Positives = 168/169 (99%)
Frame = +2
Query: 98 MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEV 277
MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEV
Sbjct: 1 MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEV 60
Query: 278 YELSAEYERKHDHEKLEELGKVITSLDAGDSIVVAKSFSHMLNLANLAEEVQISRRRRNK 457
YELSAEYERKHDHEKLEELGKVITSLDAGDSIVVAKSFSHMLNLANLAEEVQISRRRRNK
Sbjct: 61 YELSAEYERKHDHEKLEELGKVITSLDAGDSIVVAKSFSHMLNLANLAEEVQISRRRRNK 120
Query: 458 LKKGDFADENNATTESDIEETLKKLVFKLKKSPQEVFDCLKNQTVDLVL 604
LKKGDFADENNATTESDIEETLKKLVFKLKKSPQEVFD LKNQTVDLVL
Sbjct: 121 LKKGDFADENNATTESDIEETLKKLVFKLKKSPQEVFDALKNQTVDLVL 169
>sp|Q9AU12|CAPP_PHAVU Phosphoenolpyruvate carboxylase (PEPCase)
gi|13507108|gb|AAK28444.1|AF288382_1 phosphoenolpyruvate
carboxylase [Phaseolus vulgaris]
Length = 968
Score = 309 bits (791), Expect = 2e-83
Identities = 161/169 (95%), Positives = 165/169 (97%)
Frame = +2
Query: 98 MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEV 277
MANRNLEKMASIDAQLRQLAP+KVSEDDKLIEYDALLLDRFLDILQ+LHGEDLKETVQEV
Sbjct: 1 MANRNLEKMASIDAQLRQLAPSKVSEDDKLIEYDALLLDRFLDILQNLHGEDLKETVQEV 60
Query: 278 YELSAEYERKHDHEKLEELGKVITSLDAGDSIVVAKSFSHMLNLANLAEEVQISRRRRNK 457
YELSAEYE KHD +KLEELG VITSLDAGDSIVVAKSFSHMLNLANLAEEVQISRRRRNK
Sbjct: 61 YELSAEYEGKHDPKKLEELGNVITSLDAGDSIVVAKSFSHMLNLANLAEEVQISRRRRNK 120
Query: 458 LKKGDFADENNATTESDIEETLKKLVFKLKKSPQEVFDCLKNQTVDLVL 604
LKKGDFADENNATTESDIEETLKKLVF+LKKSPQEVFD LKNQTVDLVL
Sbjct: 121 LKKGDFADENNATTESDIEETLKKLVFELKKSPQEVFDALKNQTVDLVL 169
>dbj|BAA23419.1| phosphoenolpyruvate carboxylase [Glycine max]
Length = 967
Score = 308 bits (790), Expect = 3e-83
Identities = 161/169 (95%), Positives = 164/169 (96%)
Frame = +2
Query: 98 MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEV 277
MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEV
Sbjct: 1 MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEV 60
Query: 278 YELSAEYERKHDHEKLEELGKVITSLDAGDSIVVAKSFSHMLNLANLAEEVQISRRRRNK 457
YELSAEYE KHD +KLEELG +ITSLDAGDSI+VAKSFSHMLNLANLAEEVQISRRRRNK
Sbjct: 61 YELSAEYEGKHDPKKLEELGNLITSLDAGDSILVAKSFSHMLNLANLAEEVQISRRRRNK 120
Query: 458 LKKGDFADENNATTESDIEETLKKLVFKLKKSPQEVFDCLKNQTVDLVL 604
LKKGDFADENNATTESDIEETLKKLVF LKKSPQEVFD LKNQTVDLVL
Sbjct: 121 LKKGDFADENNATTESDIEETLKKLVFGLKKSPQEVFDALKNQTVDLVL 169
>dbj|BAC41249.1| phosphoenolpyruvate carboxylase [Glycine max]
Length = 967
Score = 308 bits (790), Expect = 3e-83
Identities = 161/169 (95%), Positives = 164/169 (96%)
Frame = +2
Query: 98 MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEV 277
MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEV
Sbjct: 1 MANRNLEKMASIDAQLRQLAPAKVSEDDKLIEYDALLLDRFLDILQDLHGEDLKETVQEV 60
Query: 278 YELSAEYERKHDHEKLEELGKVITSLDAGDSIVVAKSFSHMLNLANLAEEVQISRRRRNK 457
YELSAEYE KHD +KLEELG +ITSLDAGDSI+VAKSFSHMLNLANLAEEVQISRRRRNK
Sbjct: 61 YELSAEYEGKHDPKKLEELGNLITSLDAGDSILVAKSFSHMLNLANLAEEVQISRRRRNK 120
Query: 458 LKKGDFADENNATTESDIEETLKKLVFKLKKSPQEVFDCLKNQTVDLVL 604
LKKGDFADENNATTESDIEETLKKLVF LKKSPQEVFD LKNQTVDLVL
Sbjct: 121 LKKGDFADENNATTESDIEETLKKLVFGLKKSPQEVFDALKNQTVDLVL 169
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 534,676,503
Number of Sequences: 1393205
Number of extensions: 11613225
Number of successful extensions: 44175
Number of sequences better than 10.0: 272
Number of HSP's better than 10.0 without gapping: 41662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43970
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
