Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000002A_C01 KMC000002A_c01
(600 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB02121.1| gb|AAF01563.1~gene_id:K17E12.8~similar to unknow... 99 4e-20
ref|NP_189362.1| unknown protein; protein id: At3g27260.1 [Arabi... 99 4e-20
ref|NP_568297.1| kinase - like protein; protein id: At5g14270.1,... 84 1e-15
ref|NP_201137.1| putative protein; protein id: At5g63320.1 [Arab... 82 4e-15
dbj|BAB41205.1| kinase-like protein [Oryza sativa] 82 5e-15
>dbj|BAB02121.1| gb|AAF01563.1~gene_id:K17E12.8~similar to unknown protein
[Arabidopsis thaliana]
Length = 818
Score = 99.0 bits (245), Expect = 4e-20
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -1
Query: 600 KMEKTVDINETSQFLEDLEMLSGVQDEPLISFAEESSPDRPQNGLGSFKRQGSFNPLEQL 421
KMEKTV+INE S+FLEDLEMLS E L S AEE+SP+RP + LGSF +GS NPLEQL
Sbjct: 634 KMEKTVEINENSRFLEDLEMLSSSAPEQLPSSAEETSPERPLDALGSFNLRGS-NPLEQL 692
Query: 420 GLYMKVDDEDEEEEPP 373
GLYMK DD++EE E P
Sbjct: 693 GLYMKQDDDEEEPEAP 708
Score = 64.3 bits (155), Expect = 1e-09
Identities = 35/67 (52%), Positives = 45/67 (66%)
Frame = -1
Query: 525 DEPLISFAEESSPDRPQNGLGSFKRQGSFNPLEQLGLYMKVDDEDEEEEPPKNEAGPTDD 346
+ P++ E+S +RP + GSF +GS NPLEQLGLYMK DD++EE E P +D
Sbjct: 754 EAPVVPKPNETSLERPVDAFGSFNLKGS-NPLEQLGLYMKQDDDEEEPEAPA-VPNLAND 811
Query: 345 VEEGEID 325
VEEGEID
Sbjct: 812 VEEGEID 818
>ref|NP_189362.1| unknown protein; protein id: At3g27260.1 [Arabidopsis thaliana]
Length = 813
Score = 99.0 bits (245), Expect = 4e-20
Identities = 52/76 (68%), Positives = 60/76 (78%)
Frame = -1
Query: 600 KMEKTVDINETSQFLEDLEMLSGVQDEPLISFAEESSPDRPQNGLGSFKRQGSFNPLEQL 421
KMEKTV+INE S+FLEDLEMLS E L S AEE+SP+RP + LGSF +GS NPLEQL
Sbjct: 629 KMEKTVEINENSRFLEDLEMLSSSAPEQLPSSAEETSPERPLDALGSFNLRGS-NPLEQL 687
Query: 420 GLYMKVDDEDEEEEPP 373
GLYMK DD++EE E P
Sbjct: 688 GLYMKQDDDEEEPEAP 703
Score = 64.3 bits (155), Expect = 1e-09
Identities = 35/67 (52%), Positives = 45/67 (66%)
Frame = -1
Query: 525 DEPLISFAEESSPDRPQNGLGSFKRQGSFNPLEQLGLYMKVDDEDEEEEPPKNEAGPTDD 346
+ P++ E+S +RP + GSF +GS NPLEQLGLYMK DD++EE E P +D
Sbjct: 749 EAPVVPKPNETSLERPVDAFGSFNLKGS-NPLEQLGLYMKQDDDEEEPEAPA-VPNLAND 806
Query: 345 VEEGEID 325
VEEGEID
Sbjct: 807 VEEGEID 813
>ref|NP_568297.1| kinase - like protein; protein id: At5g14270.1, supported by cDNA:
gi_16604680 [Arabidopsis thaliana]
gi|16604681|gb|AAL24133.1| putative kinase [Arabidopsis
thaliana]
Length = 688
Score = 84.3 bits (207), Expect = 1e-15
Identities = 49/92 (53%), Positives = 61/92 (66%)
Frame = -1
Query: 600 KMEKTVDINETSQFLEDLEMLSGVQDEPLISFAEESSPDRPQNGLGSFKRQGSFNPLEQL 421
+ME++V++NE ++FLEDLE+L V + L + EE D P GL SF GS NPLEQL
Sbjct: 601 EMEQSVELNENAKFLEDLELLKTVDTDHLTNTIEEE--DGPDVGLRSFSFGGS-NPLEQL 657
Query: 420 GLYMKVDDEDEEEEPPKNEAGPTDDVEEGEID 325
GL+MK DEDEEE P P D+EEGEID
Sbjct: 658 GLFMK-QDEDEEEADPLTSPAPEIDIEEGEID 688
>ref|NP_201137.1| putative protein; protein id: At5g63320.1 [Arabidopsis thaliana]
gi|10177440|dbj|BAB10736.1|
gb|AAC55944.1~gene_id:K9H21.2~similar to unknown protein
[Arabidopsis thaliana]
Length = 569
Score = 82.4 bits (202), Expect = 4e-15
Identities = 51/100 (51%), Positives = 66/100 (66%), Gaps = 10/100 (10%)
Frame = -1
Query: 600 KMEKTVDINETSQFLEDLEML--SGVQDEPLISFAEESSPDRPQN--GLGSFKRQGSFNP 433
KMEKTV+INE +F+EDL+ML +G + + L + E SP ++ GLGSFK + + NP
Sbjct: 156 KMEKTVEINEGIRFMEDLQMLRATGTEGDQLPTSMEVMSPKFSEDMLGLGSFKMESNSNP 215
Query: 432 LEQLGLYMKVD-DEDEEEEPP-----KNEAGPTDDVEEGE 331
LE LGLYMK+D DEDEEE+PP K E P D E+ E
Sbjct: 216 LEHLGLYMKMDEDEDEEEDPPHFSQRKVEDNPFDRSEKQE 255
>dbj|BAB41205.1| kinase-like protein [Oryza sativa]
Length = 714
Score = 82.0 bits (201), Expect = 5e-15
Identities = 46/92 (50%), Positives = 64/92 (69%)
Frame = -1
Query: 600 KMEKTVDINETSQFLEDLEMLSGVQDEPLISFAEESSPDRPQNGLGSFKRQGSFNPLEQL 421
+ME+TV+IN+ L+DLEML E ++S +E+SP+ Q+G+ SF GS NPLEQL
Sbjct: 627 EMERTVEINDNLH-LKDLEMLGTATTEHIVSSVDETSPEHSQDGMPSFL-PGSGNPLEQL 684
Query: 420 GLYMKVDDEDEEEEPPKNEAGPTDDVEEGEID 325
GL+MK D+E+EEE+P + T D EEGEI+
Sbjct: 685 GLFMKADEEEEEEDP--SCVPSTKDAEEGEIN 714
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 491,022,171
Number of Sequences: 1393205
Number of extensions: 10907217
Number of successful extensions: 53562
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 35052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46724
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23426109484
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
