KCC010069A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC010069A_C01 KCC010069A_c01
ctgtagctcaacaccaagaacaatGGCCTGATCTGCTGGTGGTGAGCTGTGCAGAGCTGC
TGGTGAGCTGTGGCTCTTTCTGTGCCTGTGTGCTTCTGTGCTGTGCCTGTGTGCTGACCT
GCTGTGCCTGTGTGCCTGTGTGTGATTGCTCTGCCTGCTGCATCTGCTGTGTCAATGAAA
TGTGATGTGACTGATGTGATGCAATGTTGTGTGTTGCCCTTTGTCATCCTACATG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC010069A_C01 KCC010069A_c01
         (235 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_042981.1| Hypothetical protein [Human herpesvirus 6] gi|8...    50  9e-06
pir||E71602 probable integral membrane protein PFB0950w - malari...    49  3e-05
ref|NP_473118.2| hypothetical protein [Plasmodium falciparum 3D7...    49  3e-05
ref|NP_495859.1| putative secreted or extracellular protein prec...    47  1e-04
ref|NP_494943.1| putative secreted or extracellular protein prec...    47  1e-04

>ref|NP_042981.1| Hypothetical protein [Human herpesvirus 6]
           gi|854065|emb|CAA58337.1| U88 [Human herpesvirus 6]
          Length = 413

 Score = 50.1 bits (118), Expect = 9e-06
 Identities = 28/62 (45%), Positives = 31/62 (49%), Gaps = 3/62 (4%)
 Frame = +3

Query: 48  CAELLVSCGSFCACVLLC-CACVLTC-CACVPVCDCSACCIC-CVNEM*CD*CDAMLCVA 218
           CA L V C   C C  LC CAC+  C C CV VC C   C+C CV    C      +CV 
Sbjct: 142 CACLCV-CACLCVCACLCVCACLCVCACLCVCVCVCLCVCVCLCVCVCLCVCVCLCVCVC 200

Query: 219 LC 224
           LC
Sbjct: 201 LC 202

 Score = 49.3 bits (116), Expect = 2e-05
 Identities = 27/60 (45%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
 Frame = +3

Query: 60  LVSCGSFCACVLLC---CACVLTC-CACVPVCDCSACCIC-CVNEM*CD*CDAMLCVALC 224
           L  C   C CV LC   C CV  C C CV VC C   C+C CV    C      LCV LC
Sbjct: 213 LCVCVCLCVCVCLCVCVCLCVCVCVCVCVCVCVCVCVCVCVCVCLCVCVCLCVCLCVCLC 272

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 28/68 (41%), Positives = 32/68 (46%), Gaps = 9/68 (13%)
 Frame = +3

Query: 48  CAELLVSCGSFCACVLLC-CACVLTC-----CACVPVCDCSACCIC---CVNEM*CD*CD 200
           CA L V C   C C  LC CAC+  C     CAC+ VC C   C+C   CV    C    
Sbjct: 130 CACLCV-CACLCVCACLCVCACLCVCACLCVCACLCVCACLCVCVCVCLCVCVCLCVCVC 188

Query: 201 AMLCVALC 224
             +CV LC
Sbjct: 189 LCVCVCLC 196

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 29/69 (42%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
 Frame = +3

Query: 39  VVSCAELLVSCGSFCACVLLC-CACVLTC-----CACVPVCDCSACCIC-CVNEM*CD*C 197
           V  CA L V C   C C  LC CAC+  C     CAC+ VC C   C C CV    C   
Sbjct: 121 VCVCACLCV-CACLCVCACLCVCACLCVCACLCVCACLCVCACLCVCACLCVCVCVCLCV 179

Query: 198 DAMLCVALC 224
              LCV +C
Sbjct: 180 CVCLCVCVC 188

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 25/64 (39%), Positives = 32/64 (49%), Gaps = 5/64 (7%)
 Frame = +3

Query: 48  CAELLVSCGSFCACVLLC-CACVLTC---CACVPVCDCSACCIC-CVNEM*CD*CDAMLC 212
           CA + V C   C C  LC CAC+  C   C C  +C C+  C+C C+    C    A LC
Sbjct: 112 CARVCV-CACVCVCACLCVCACLCVCACLCVCACLCVCACLCVCACLCVCACLCVCACLC 170

Query: 213 VALC 224
           V +C
Sbjct: 171 VCVC 174

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 27/62 (43%), Positives = 28/62 (44%), Gaps = 7/62 (11%)
 Frame = +3

Query: 60  LVSCGSFCACVLLC---CACVLTC-CACVPVCDCSACCIC---CVNEM*CD*CDAMLCVA 218
           L  C   C CV LC   C CV  C C CV VC C   C+C   CV    C      LCV 
Sbjct: 207 LCVCVCLCVCVCLCVCVCLCVCVCLCVCVCVCVCVCVCVCVCVCVCVCVCLCVCVCLCVC 266

Query: 219 LC 224
           LC
Sbjct: 267 LC 268

 Score = 48.1 bits (113), Expect = 4e-05
 Identities = 25/59 (42%), Positives = 29/59 (48%), Gaps = 7/59 (11%)
 Frame = +3

Query: 69  CGSFCACVLLC-CACVLTC-CACVPVCDCSACCIC-----CVNEM*CD*CDAMLCVALC 224
           C   C CV LC C CV  C C CV VC C   C+C     CV       C  +LC++LC
Sbjct: 254 CVCLCVCVCLCVCLCVCLCVCVCVCVCLCVCLCVCLCVCVCV-------CVCLLCMSLC 305

 Score = 48.1 bits (113), Expect = 4e-05
 Identities = 28/69 (40%), Positives = 32/69 (45%), Gaps = 7/69 (10%)
 Frame = +3

Query: 39  VVSCAELLVSCGSFCACVLLC-CACVLTC-----CACVPVCDCSACCIC-CVNEM*CD*C 197
           V  CA + V C   C C  LC CAC+  C     CAC+ VC C   C C CV    C   
Sbjct: 115 VCVCACVCV-CACLCVCACLCVCACLCVCACLCVCACLCVCACLCVCACLCVCACLCVCV 173

Query: 198 DAMLCVALC 224
              LCV +C
Sbjct: 174 CVCLCVCVC 182

 Score = 47.8 bits (112), Expect = 5e-05
 Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +3

Query: 60  LVSCGSFCACVLLC-CACVLTC-CACVPVCDCSACCIC-CVNEM*CD*CDAMLCVALC 224
           L  C   C CV LC C C+  C C CV VC C   C+C CV    C      +CV LC
Sbjct: 201 LCVCVCLCVCVCLCVCVCLCVCVCLCVCVCLCVCVCVCVCVCVCVCVCVCVCVCVCLC 258

 Score = 47.0 bits (110), Expect = 8e-05
 Identities = 28/69 (40%), Positives = 32/69 (45%), Gaps = 5/69 (7%)
 Frame = +3

Query: 33  LLVVSCAELLVSCGSFCACVLLC---CACVLTC-CACVPVCDCSACCIC-CVNEM*CD*C 197
           L V  C  L V C   C CV LC   C CV  C C CV +C C   C+C C+    C   
Sbjct: 169 LCVCVCVCLCV-CVCLCVCVCLCVCVCLCVCVCLCVCVCLCVCVCLCVCVCLCVCVCLCV 227

Query: 198 DAMLCVALC 224
              LCV +C
Sbjct: 228 CVCLCVCVC 236

 Score = 47.0 bits (110), Expect = 8e-05
 Identities = 28/67 (41%), Positives = 32/67 (46%), Gaps = 8/67 (11%)
 Frame = +3

Query: 48  CAELLV-SCGSFCACVLLC---CACVLTC-CACVPVCDCSACCIC---CVNEM*CD*CDA 203
           CA L V +C   C CV LC   C CV  C C CV +C C   C+C   CV    C     
Sbjct: 160 CACLCVCACLCVCVCVCLCVCVCLCVCVCLCVCVCLCVCVCLCVCVCLCVCVCLCVCVCL 219

Query: 204 MLCVALC 224
            +CV LC
Sbjct: 220 CVCVCLC 226

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 27/67 (40%), Positives = 33/67 (48%), Gaps = 8/67 (11%)
 Frame = +3

Query: 48  CAELLV-SCGSFCACVLLC---CACVLTC-CACVPVCDCSACCIC---CVNEM*CD*CDA 203
           CA L V +C   CAC+ +C   C CV  C C CV +C C   C+C   CV    C     
Sbjct: 148 CACLCVCACLCVCACLCVCACLCVCVCVCLCVCVCLCVCVCLCVCVCLCVCVCLCVCVCL 207

Query: 204 MLCVALC 224
            +CV LC
Sbjct: 208 CVCVCLC 214

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 27/67 (40%), Positives = 33/67 (48%), Gaps = 8/67 (11%)
 Frame = +3

Query: 48  CAELLV-SCGSFCACVLLC---CACVLTC-CACVPVCDCSACCIC---CVNEM*CD*CDA 203
           CA L V +C   CAC+ +C   C CV  C C CV +C C   C+C   CV    C     
Sbjct: 154 CACLCVCACLCVCACLCVCVCVCLCVCVCLCVCVCLCVCVCLCVCVCLCVCVCLCVCVCL 213

Query: 204 MLCVALC 224
            +CV LC
Sbjct: 214 CVCVCLC 220

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 26/71 (36%), Positives = 32/71 (44%), Gaps = 9/71 (12%)
 Frame = +3

Query: 39  VVSCAELLVSCGSFCACVLLC-----CACVLTC---CACVPVCDCSACCIC-CVNEM*CD 191
           V  CA + V C   C C  +C     CACV  C   C C  +C C+  C+C C+    C 
Sbjct: 93  VCVCARVCV-CARVCVCARVCARVCVCACVCVCACLCVCACLCVCACLCVCACLCVCACL 151

Query: 192 *CDAMLCVALC 224
              A LCV  C
Sbjct: 152 CVCACLCVCAC 162

 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 24/58 (41%), Positives = 28/58 (47%), Gaps = 3/58 (5%)
 Frame = +3

Query: 60  LVSCGSFCACVLLC-CACVLTC-CACVPVCDCSACCIC-CVNEM*CD*CDAMLCVALC 224
           L  C   C CV LC C C+  C C CV VC C   C+C CV    C      +CV +C
Sbjct: 183 LCVCVCLCVCVCLCVCVCLCVCVCLCVCVCLCVCVCLCVCVCLCVCVCLCVCVCVCVC 240

 Score = 43.5 bits (101), Expect = 9e-04
 Identities = 19/57 (33%), Positives = 28/57 (48%), Gaps = 2/57 (3%)
 Frame = +3

Query: 60  LVSCGSFCACVLLC-CACVLTC-CACVPVCDCSACCICCVNEM*CD*CDAMLCVALC 224
           L  C   C CV +C C C+  C C C+ VC C   C+ C++   C      +C+ +C
Sbjct: 263 LCVCLCVCLCVCVCVCVCLCVCLCVCLCVCVCVCVCLLCMSLCMCMCMCMCMCMCMC 319

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +3

Query: 33  LLVVSCAELLVSCGSFCACVLLCCACVLTCCACVPVCDCSACCIC-CVNEM*CD*CDAML 209
           LL +S    +  C   C C+ +C +  ++ C C+ +C C   CIC C+    C      +
Sbjct: 299 LLCMSLCMCMCMCMCMCMCMCMCMSLCMSLCMCMCMCMCMCMCICMCMCICICMCMCMCM 358

Query: 210 CVALC 224
           C+ +C
Sbjct: 359 CMCMC 363

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = +3

Query: 36  LVVSCAELLVSCGSFCACVLLC-CACVLTC-CACVPVCDCSACCIC-CVNEM*CD*CDAM 206
           L +S    +  C   C C+ +C C C+  C C C+ +C C   C+C C+    C      
Sbjct: 324 LCMSLCMCMCMCMCMCMCICMCMCICICMCMCMCMCMCMCMCMCMCMCMCMCMCMCMCMC 383

Query: 207 LCVALC 224
           +C+ +C
Sbjct: 384 MCMCMC 389

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 10/62 (16%)
 Frame = +3

Query: 69  CGSFCACVLLC-CACVLTC---CACVPVCDCSAC---CIC---CVNEM*CD*CDAMLCVA 218
           C   C CV +C C CV  C   C CV VC C  C   C+C   C+    C      LC++
Sbjct: 268 CVCLCVCVCVCVCLCVCLCVCLCVCVCVCVCLLCMSLCMCMCMCMCMCMCMCMCMSLCMS 327

Query: 219 LC 224
           LC
Sbjct: 328 LC 329

 Score = 37.4 bits (85), Expect = 0.063
 Identities = 17/55 (30%), Positives = 27/55 (48%), Gaps = 3/55 (5%)
 Frame = +3

Query: 69  CGSFCACVLLC-CACVLTC-CACVPVCDCSACCIC-CVNEM*CD*CDAMLCVALC 224
           C   C C+ +C C C+  C C C+ +C C   C+C C+    C      +C+ +C
Sbjct: 359 CMCMCMCMCMCMCMCMCMCMCMCMCMCMCMCMCMCMCMCMCMC------MCMCMC 407

 Score = 37.0 bits (84), Expect = 0.083
 Identities = 13/37 (35%), Positives = 20/37 (53%), Gaps = 2/37 (5%)
 Frame = +3

Query: 69  CGSFCACVLLC-CACVLTC-CACVPVCDCSACCICCV 173
           C   C C+ +C C C+  C C C+ +C C   C+C +
Sbjct: 373 CMCMCMCMCMCMCMCMCMCMCMCMCMCMCMCMCMCII 409

 Score = 35.0 bits (79), Expect = 0.32
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
 Frame = +3

Query: 60  LVSCGSFCACVLLCCACVLTC-----CACVPVCDCSACCICCVNEM*CD*CDAM-LCVAL 221
           L  C   C CV +C  C+  C     C C+ +C C    +C    M    C  M +C+ +
Sbjct: 285 LCVCLCVCVCVCVCLLCMSLCMCMCMCMCMCMCMCMCMSLCMSLCMCMCMCMCMCMCICM 344

Query: 222 C 224
           C
Sbjct: 345 C 345

 Score = 34.7 bits (78), Expect = 0.41
 Identities = 22/60 (36%), Positives = 30/60 (49%), Gaps = 4/60 (6%)
 Frame = +2

Query: 68  LWLFLCLCASV-LCLCADL---LCLCACV*LLCLLHLLCQ*NVM*LM*CNVVCCPLSSYM 235
           L + LC+C  V +CLC  L   LC+C CV +  L   LC    M +  C  +C  +S  M
Sbjct: 267 LCVCLCVCVCVCVCLCVCLCVCLCVCVCVCVCLLCMSLCMCMCMCMCMCMCMCMCMSLCM 326

 Score = 33.9 bits (76), Expect = 0.70
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
 Frame = +3

Query: 42  VSCAELLVSCGSFCACVLLCCACVLTCCACVPVCDCSACCIC---CVNEM*CD*CDAMLC 212
           VS +  +  C   CA V +C       C C  VC C+  C+C   C     C    A +C
Sbjct: 71  VSVSVRVSVCARVCARVCVCARV----CVCARVCVCARVCVCARVCARVCVC----ACVC 122

Query: 213 VALC 224
           V  C
Sbjct: 123 VCAC 126

>pir||E71602 probable integral membrane protein PFB0950w - malaria parasite
           (Plasmodium falciparum)
          Length = 248

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = +3

Query: 60  LVSCGSFCACVLLC-CACVLTC-CACVPVCDCSACCIC-CVNEM*CD*CDAMLCV 215
           + SC S C+C+  C C+C+ +C C C  +C C   CIC CV    C       CV
Sbjct: 144 ICSCSSLCSCICSCICSCICSCICTCTCICSCLCSCICSCVCSCVCSSACTCACV 198

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = +3

Query: 45  SCAELLVSCGSFCACVLLC---CACVLTC-CACVPVCDCSACCIC-CVNEM*CD*CDAML 209
           SCA   + C   C+C  LC   C+C+ +C C+C+  C C   C+C C+    C    +  
Sbjct: 134 SCAYSCL-CSCICSCSSLCSCICSCICSCICSCICTCTCICSCLCSCICSCVCSCVCSSA 192

Query: 210 CVALC 224
           C   C
Sbjct: 193 CTCAC 197

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 18/54 (33%), Positives = 27/54 (49%), Gaps = 5/54 (9%)
 Frame = +3

Query: 78  FCACVLLC-CACVLTC---CACVPVCDCSACCIC-CVNEM*CD*CDAMLCVALC 224
           FC+C   C C+C+ +C   C+C+  C CS  C C C     C    + +C  +C
Sbjct: 132 FCSCAYSCLCSCICSCSSLCSCICSCICSCICSCICTCTCICSCLCSCICSCVC 185

 Score = 33.9 bits (76), Expect = 0.70
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
 Frame = +3

Query: 54  ELLVSCGSFCACVLLCCACVLTC-CACVPVCDCSACCIC---CVNEM*CD*CDAMLCVAL 221
           E+++  G      +  C+C  +C C+C+  C CS+ C C   C+    C       C+  
Sbjct: 117 EIIMLIGYIIKYFMCFCSCAYSCLCSCI--CSCSSLCSCICSCICSCICSCICTCTCICS 174

Query: 222 C 224
           C
Sbjct: 175 C 175

>ref|NP_473118.2| hypothetical protein [Plasmodium falciparum 3D7]
           gi|23503445|gb|AAC71979.2| hypothetical protein PFB0950w
           [Plasmodium falciparum 3D7]
          Length = 307

 Score = 48.5 bits (114), Expect = 3e-05
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = +3

Query: 60  LVSCGSFCACVLLC-CACVLTC-CACVPVCDCSACCIC-CVNEM*CD*CDAMLCV 215
           + SC S C+C+  C C+C+ +C C C  +C C   CIC CV    C       CV
Sbjct: 203 ICSCSSLCSCICSCICSCICSCICTCTCICSCLCSCICSCVCSCVCSSACTCACV 257

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = +3

Query: 45  SCAELLVSCGSFCACVLLC---CACVLTC-CACVPVCDCSACCIC-CVNEM*CD*CDAML 209
           SCA   + C   C+C  LC   C+C+ +C C+C+  C C   C+C C+    C    +  
Sbjct: 193 SCAYSCL-CSCICSCSSLCSCICSCICSCICSCICTCTCICSCLCSCICSCVCSCVCSSA 251

Query: 210 CVALC 224
           C   C
Sbjct: 252 CTCAC 256

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 18/54 (33%), Positives = 27/54 (49%), Gaps = 5/54 (9%)
 Frame = +3

Query: 78  FCACVLLC-CACVLTC---CACVPVCDCSACCIC-CVNEM*CD*CDAMLCVALC 224
           FC+C   C C+C+ +C   C+C+  C CS  C C C     C    + +C  +C
Sbjct: 191 FCSCAYSCLCSCICSCSSLCSCICSCICSCICSCICTCTCICSCLCSCICSCVC 244

 Score = 33.9 bits (76), Expect = 0.70
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
 Frame = +3

Query: 54  ELLVSCGSFCACVLLCCACVLTC-CACVPVCDCSACCIC---CVNEM*CD*CDAMLCVAL 221
           E+++  G      +  C+C  +C C+C+  C CS+ C C   C+    C       C+  
Sbjct: 176 EIIMLIGYIIKYFMCFCSCAYSCLCSCI--CSCSSLCSCICSCICSCICSCICTCTCICS 233

Query: 222 C 224
           C
Sbjct: 234 C 234

>ref|NP_495859.1| putative secreted or extracellular protein precursor (2J24)
           [Caenorhabditis elegans] gi|7506829|pir||T24272
           hypothetical protein T01B7.8 - Caenorhabditis elegans
           gi|3879236|emb|CAA91301.1| Hypothetical protein T01B7.8
           [Caenorhabditis elegans]
          Length = 164

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 16/34 (47%), Positives = 17/34 (49%)
 Frame = +3

Query: 69  CGSFCACVLLCCACVLTCCACVPVCDCSACCICC 170
           CG  C C   CC C   CC C   C C+ CC CC
Sbjct: 82  CGC-CCCRPRCCCCCRRCCTCCRTCCCTRCCTCC 114

 Score = 36.6 bits (83), Expect = 0.11
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = +3

Query: 81  CACVLLCCACVLTCCACVPVCDCSACCIC 167
           C C   CC C  TCC C   C C   C C
Sbjct: 92  CCCCRRCCTCCRTCC-CTRCCTCCRPCCC 119

 Score = 34.3 bits (77), Expect = 0.54
 Identities = 12/37 (32%), Positives = 13/37 (34%)
 Frame = +3

Query: 48  CAELLVSCGSFCACVLLCCACVLTCCACVPVCDCSAC 158
           C     +C   C C   C  C   CC C   C C  C
Sbjct: 94  CCRRCCTCCRTCCCTRCCTCCRPCCCGCGCGCGCCGC 130

 Score = 33.5 bits (75), Expect = 0.92
 Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
 Frame = +3

Query: 69  CGSFCACVLLCCACVLTCCACVP-VCDCSACCICC 170
           C   C C   CC C   C  C P  C C   C CC
Sbjct: 95  CRRCCTCCRTCC-CTRCCTCCRPCCCGCGCGCGCC 128

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
 Frame = +3

Query: 69  CGSFCACVLLCCACV-----LTCCACVPVCDCSACCICCVNEM*CD*CDAMLCVALC 224
           CG  C C   CC C        CC C P      CC CC     C  C    C   C
Sbjct: 63  CGC-CGCGCGCCGCGGGGGGCGCCCCRP-----RCCCCC--RRCCTCCRTCCCTRCC 111

>ref|NP_494943.1| putative secreted or extracellular protein precursor (2F392)
           [Caenorhabditis elegans]
           gi|14573761|gb|AAK68161.1|U55854_9 Hypothetical protein
           C04G6.7 [Caenorhabditis elegans]
          Length = 197

 Score = 46.6 bits (109), Expect = 1e-04
 Identities = 16/34 (47%), Positives = 17/34 (49%)
 Frame = +3

Query: 69  CGSFCACVLLCCACVLTCCACVPVCDCSACCICC 170
           CG  C C   CC C   CC C   C C+ CC CC
Sbjct: 84  CGC-CCCRPRCCCCCRRCCTCCRTCCCTRCCTCC 116

 Score = 36.6 bits (83), Expect = 0.11
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = +3

Query: 81  CACVLLCCACVLTCCACVPVCDCSACCIC 167
           C C   CC C  TCC C   C C   C C
Sbjct: 94  CCCCRRCCTCCRTCC-CTRCCTCCRPCCC 121

 Score = 34.7 bits (78), Expect = 0.41
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +3

Query: 69  CGSFCACVLLCCACVLTCCACVPVCDCSACCICC 170
           C   C C   CC     CC C   C C   C CC
Sbjct: 97  CRRCCTCCRTCCC--TRCCTCCRPCCCGCGCGCC 128

 Score = 32.7 bits (73), Expect = 1.6
 Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
 Frame = +3

Query: 69  CGSFCACVLLCCACV-----LTCCACVPVCDCSACCICCVNEM*CD*CDAMLCVALC 224
           CG  C C   CC C        CC C P      CC CC     C  C    C   C
Sbjct: 65  CGC-CGCGCGCCGCGGGGGGCGCCCCRP-----RCCCCC--RRCCTCCRTCCCTRCC 113

 Score = 31.6 bits (70), Expect = 3.5
 Identities = 12/37 (32%), Positives = 13/37 (34%)
 Frame = +3

Query: 48  CAELLVSCGSFCACVLLCCACVLTCCACVPVCDCSAC 158
           C     +C   C C   C  C   CC C   C C  C
Sbjct: 96  CCRRCCTCCRTCCCTRCCTCCRPCCCGC--GCGCCGC 130



EST assemble image


clone accession position
1 MX229c06_r BP090797 1 154
2 MX231a08_r BP090921 25 236




Chlamydomonas reinhardtii
Kazusa DNA Research Institute