KCC009475A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC009475A_C01 KCC009475A_c01
caggagcccatcgccatggaccgcctgtctgcggcgcacaagaacggcggctgggtgctg
ctgcagaacatccacctcacCATCGACTGGACCACCAACCAGCTGGACAAGAAGGTGGAC
AAGCTGGTGGAGGGTGCGCACCCCGACTTCCGCCTGTTCCTGTCAGCGGAGCCGCCGCCA
AGCCTGGAGCTGCGGCCTGCCCATCTCGCTGCTGCAGAACAGCATCAAGCTGACCAATGA
GCCGCCCGAGGGCCTGAAGGCCAACCTGCGCCGCGCCTGGAACAACTTCAATGAGGAGAT
TCTGGAGAGCTGCGCCAAGCAGGCTGAGTTCCGCGCCATCGTGTTTGCGCTGTGCTACTT
CCACGCCGCGCTGCTGGAGCGCAAGAAGTTCGGTGTGGGCAACCTGCCGGGCGCCCGCTC
GGGCATCGGGTGGAACATGAACTACCCCTTCAACACTGGCGACCTGCTGTGCTGCGGCCA
GACCGCCAATAACTACCTTGAGAACAACGTCAAGGTGCCGTGGGAGGACCTGCGCTATAA
CTTCGGCGAGATCATGTACGGCGTGCACATTGTGGAGGACTACGACCGCCGCCTTGCCAT
GTTGCTACTGCGCAAGTACGTGAACGAGGGTCTGCTGGACAAAATGGAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC009475A_C01 KCC009475A_c01
         (649 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q39565|DYHB_CHLRE Dynein beta chain, flagellar outer arm gi|7...   305  e-115
gb|AAQ06635.1| dynein heavy chain protein [Drosophila hydei]          166  6e-54
ref|XP_137636.2| similar to dynein, axonemal, heavy polypeptide ...   162  1e-53
ref|XP_321424.1| ENSANGP00000022156 [Anopheles gambiae] gi|21289...   166  9e-53
sp|Q9NYC9|DYH9_HUMAN Ciliary dynein heavy chain 9 (Axonemal beta...   162  2e-52

>sp|Q39565|DYHB_CHLRE Dynein beta chain, flagellar outer arm gi|7484362|pir||T08030 dynein
            beta heavy chain - Chlamydomonas reinhardtii
            gi|514215|gb|AAA19956.1| dynein beta heavy chain
          Length = 4568

 Score =  305 bits (781), Expect(2) = e-115
 Identities = 146/152 (96%), Positives = 146/152 (96%)
 Frame = +2

Query: 194  GLPISLLQNSIKLTNEPPEGLKANLRRAWNNFNEEILESCAKQAEFRAIVFALCYFHAAL 373
            GLPISLLQNSIKLTNEP  GLKANLRRAWNNFNEEILESCAKQAEFRAIVFALCYFHAAL
Sbjct: 4073 GLPISLLQNSIKLTNEPARGLKANLRRAWNNFNEEILESCAKQAEFRAIVFALCYFHAAL 4132

Query: 374  LERKKFGVGNLPGARSGIGWNMNYPFNTGDLLCCGQTANNYLENNVKVPWEDLRYNFGEI 553
            LERKKFGVGNLPGARSGIGWNMNYPFNTGDLLCCGQTANNYLENNVKVPWEDLRYNFGEI
Sbjct: 4133 LERKKFGVGNLPGARSGIGWNMNYPFNTGDLLCCGQTANNYLENNVKVPWEDLRYNFGEI 4192

Query: 554  MYGVHIVEDYDRRLAMLLLRKYVNEGLLDKME 649
            MYG HIVEDYDRRLAM  LRKYVNEGLLD ME
Sbjct: 4193 MYGGHIVEDYDRRLAMCYLRKYVNEGLLDNME 4224

 Score =  134 bits (336), Expect(2) = e-115
 Identities = 63/63 (100%), Positives = 63/63 (100%)
 Frame = +1

Query: 1    QEPIAMDRLSAAHKNGGWVLLQNIHLTIDWTTNQLDKKVDKLVEGAHPDFRLFLSAEPPP 180
            QEPIAMDRLSAAHKNGGWVLLQNIHLTIDWTTNQLDKKVDKLVEGAHPDFRLFLSAEPPP
Sbjct: 4009 QEPIAMDRLSAAHKNGGWVLLQNIHLTIDWTTNQLDKKVDKLVEGAHPDFRLFLSAEPPP 4068

Query: 181  SLE 189
            SLE
Sbjct: 4069 SLE 4071

>gb|AAQ06635.1| dynein heavy chain protein [Drosophila hydei]
          Length = 4488

 Score =  166 bits (420), Expect(2) = 6e-54
 Identities = 80/148 (54%), Positives = 101/148 (68%)
 Frame = +2

Query: 197  LPISLLQNSIKLTNEPPEGLKANLRRAWNNFNEEILESCAKQAEFRAIVFALCYFHAALL 376
            +P  +L++SIK+TNEPP G+ ANL +A +NF +E LE   K+AEF+AI+F+LCYFHA + 
Sbjct: 4005 IPQGILESSIKITNEPPTGMLANLHKALDNFTQETLEMSGKEAEFKAILFSLCYFHAVVA 4064

Query: 377  ERKKFGVGNLPGARSGIGWNMNYPFNTGDLLCCGQTANNYLENNVKVPWEDLRYNFGEIM 556
            ER+KFG           GWN  YPFN GDL        NYLE N KVPWEDLRY FGEIM
Sbjct: 4065 ERRKFGAQ---------GWNKIYPFNVGDLNISVSVLYNYLEANAKVPWEDLRYLFGEIM 4115

Query: 557  YGVHIVEDYDRRLAMLLLRKYVNEGLLD 640
            YG HI +D+DRRL +  L +Y+   L+D
Sbjct: 4116 YGGHITDDWDRRLCITYLEEYMQPDLVD 4143

 Score = 67.0 bits (162), Expect(2) = 6e-54
 Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
 Frame = +1

Query: 1    QEPIAMDRLSAAHKNGGWVLLQNIHLTIDWTTNQLDKKVDKLVEGAHPDFRLFLSAEP-- 174
            QE IA   +  A KNG WV+LQNIHL   W    L+KK++   EG+HPD+R+FLSAEP  
Sbjct: 3940 QESIAETAMDTAAKNGHWVVLQNIHLVRKWLP-VLEKKLEHYAEGSHPDYRMFLSAEPAS 3998

Query: 175  PPSLELRP 198
             PS  + P
Sbjct: 3999 TPSAHIIP 4006

>ref|XP_137636.2| similar to dynein, axonemal, heavy polypeptide 9, isoform 2;
           dynein, axonemal, heavy polypeptide 17-like; dynein,
           axonemal, light intermediate chain 1; ciliary dynein
           heavy chain [Homo sapiens] [Mus musculus]
          Length = 1059

 Score =  162 bits (411), Expect(2) = 1e-53
 Identities = 75/148 (50%), Positives = 102/148 (68%)
 Frame = +2

Query: 197 LPISLLQNSIKLTNEPPEGLKANLRRAWNNFNEEILESCAKQAEFRAIVFALCYFHAALL 376
           +P  +L+NSIK+TNEPP G+ ANL +A +NF ++ LE C+++ EF+ I+FALCYFHA + 
Sbjct: 576 IPQGILENSIKITNEPPTGMHANLHKALDNFTQDTLEMCSRETEFKTILFALCYFHAVVA 635

Query: 377 ERKKFGVGNLPGARSGIGWNMNYPFNTGDLLCCGQTANNYLENNVKVPWEDLRYNFGEIM 556
           ER+KFG           GWN +YPFNTGDL        N+LE N KVP++DLRY FGEIM
Sbjct: 636 ERRKFGPQ---------GWNRSYPFNTGDLTISVNVLYNFLEANTKVPYDDLRYLFGEIM 686

Query: 557 YGVHIVEDYDRRLAMLLLRKYVNEGLLD 640
           YG HI +D+DRRL    L +++   +L+
Sbjct: 687 YGGHITDDWDRRLCRTYLEEFIRPEMLE 714

 Score = 69.3 bits (168), Expect(2) = 1e-53
 Identities = 34/63 (53%), Positives = 44/63 (68%)
 Frame = +1

Query: 1   QEPIAMDRLSAAHKNGGWVLLQNIHLTIDWTTNQLDKKVDKLVEGAHPDFRLFLSAEPPP 180
           QE +A   L  A K G WV+LQNIHL   W +  L+KK+++L E +HPDFR+F+SAEP P
Sbjct: 511 QEVVAEAALDLAAKKGHWVILQNIHLVAKWLST-LEKKLEELSEESHPDFRVFISAEPAP 569

Query: 181 SLE 189
           S E
Sbjct: 570 SPE 572

>ref|XP_321424.1| ENSANGP00000022156 [Anopheles gambiae] gi|21289082|gb|EAA01375.1|
            ENSANGP00000022156 [Anopheles gambiae str. PEST]
          Length = 4511

 Score =  166 bits (420), Expect(2) = 9e-53
 Identities = 78/148 (52%), Positives = 103/148 (68%)
 Frame = +2

Query: 197  LPISLLQNSIKLTNEPPEGLKANLRRAWNNFNEEILESCAKQAEFRAIVFALCYFHAALL 376
            +P  +L+++IK+TNEPP G+ AN+ +A +NFN+E LE C K+AEF+AI+F+LCYFHA + 
Sbjct: 4029 IPQGILESAIKITNEPPTGMLANVHKALDNFNQETLEMCGKEAEFKAILFSLCYFHAVVA 4088

Query: 377  ERKKFGVGNLPGARSGIGWNMNYPFNTGDLLCCGQTANNYLENNVKVPWEDLRYNFGEIM 556
            ER+KFG           GWN +YPFN GDL        NYLE N +VPWEDLRY FGEIM
Sbjct: 4089 ERRKFGPQ---------GWNRSYPFNVGDLTISVYVLYNYLEANNRVPWEDLRYLFGEIM 4139

Query: 557  YGVHIVEDYDRRLAMLLLRKYVNEGLLD 640
            YG HI +D+DRRL    L +++   L+D
Sbjct: 4140 YGGHITDDWDRRLCRTYLEEFMQPELVD 4167

 Score = 63.2 bits (152), Expect(2) = 9e-53
 Identities = 31/63 (49%), Positives = 40/63 (63%)
 Frame = +1

Query: 1    QEPIAMDRLSAAHKNGGWVLLQNIHLTIDWTTNQLDKKVDKLVEGAHPDFRLFLSAEPPP 180
            QE +A   +  A K G WV+LQNIHL   W    L+KK++   EGAH ++RLF+S EP P
Sbjct: 3964 QEVVAEAAMDVACKEGHWVVLQNIHLVAKWLPT-LEKKMEATQEGAHANYRLFISGEPAP 4022

Query: 181  SLE 189
            S E
Sbjct: 4023 SAE 4025

>sp|Q9NYC9|DYH9_HUMAN Ciliary dynein heavy chain 9 (Axonemal beta dynein heavy chain 9)
            gi|7739767|gb|AAF69004.1|AF257737_1 ciliary dynein heavy
            chain 9 [Homo sapiens]
          Length = 4486

 Score =  162 bits (410), Expect(2) = 2e-52
 Identities = 75/148 (50%), Positives = 103/148 (68%)
 Frame = +2

Query: 197  LPISLLQNSIKLTNEPPEGLKANLRRAWNNFNEEILESCAKQAEFRAIVFALCYFHAALL 376
            +P  +L+NSIK+TNEPP G+ ANL +A +NF ++ LE C+++ EF++I+FALCYFHA + 
Sbjct: 4003 IPQGILENSIKITNEPPTGMHANLHKALDNFTQDTLEMCSRETEFKSILFALCYFHAVVA 4062

Query: 377  ERKKFGVGNLPGARSGIGWNMNYPFNTGDLLCCGQTANNYLENNVKVPWEDLRYNFGEIM 556
            ER+KFG           GWN +YPFNTGDL        N+LE N KVP++DLRY FGEIM
Sbjct: 4063 ERRKFGPQ---------GWNRSYPFNTGDLTISVNVLYNFLEANAKVPYDDLRYLFGEIM 4113

Query: 557  YGVHIVEDYDRRLAMLLLRKYVNEGLLD 640
            YG HI +D+DRRL    L +++   +L+
Sbjct: 4114 YGGHITDDWDRRLCRTYLGEFIRPEMLE 4141

 Score = 65.9 bits (159), Expect(2) = 2e-52
 Identities = 32/63 (50%), Positives = 43/63 (67%)
 Frame = +1

Query: 1    QEPIAMDRLSAAHKNGGWVLLQNIHLTIDWTTNQLDKKVDKLVEGAHPDFRLFLSAEPPP 180
            QE +A   L  A K G WV+LQNIHL   W +  L+KK+++  E +HP+FR+F+SAEP P
Sbjct: 3938 QEVVAEAALDLAAKKGHWVILQNIHLVAKWLST-LEKKLEEHSENSHPEFRVFMSAEPAP 3996

Query: 181  SLE 189
            S E
Sbjct: 3997 SPE 3999



EST assemble image


clone accession position
1 MXL048g11_r BP095887 1 496
2 MX255g12_r BP092551 152 649




Chlamydomonas reinhardtii
Kazusa DNA Research Institute