Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC009439A_C01 KCC009439A_c01
(366 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_325798.1| hypothetical protein [Neurospora crassa] gi|289... 40 0.008
ref|NP_496193.1| putative nuclear protein, with a coiled coil do... 39 0.024
gb|AAC47557.1| insect intestinal mucin IIM22 [Trichoplusia ni] 38 0.031
gb|AAC47556.1| insect intestinal mucin IIM14 [Trichoplusia ni] 38 0.031
sp|P36286|POLN_SMSV1 Non-structural polyprotein [Contains: RNA-d... 33 0.092
>ref|XP_325798.1| hypothetical protein [Neurospora crassa] gi|28920172|gb|EAA29551.1|
hypothetical protein [Neurospora crassa]
Length = 1050
Score = 40.0 bits (92), Expect = 0.008
Identities = 28/102 (27%), Positives = 43/102 (41%), Gaps = 11/102 (10%)
Frame = +2
Query: 71 LCSHPRRFSPHQNTHVEPQTRH-PGWLSRYPKRAATSHHSRTKSGAQPRPTPSNR*AKPA 247
L HP + PH H +PQ +H + +P H S+ ++ QP P P +P
Sbjct: 865 LPQHPPQHQPHHQAHFQPQPQHQQQHQAHHPPHHQPQHQSQQQAHHQPHPPPPQHHQQPQ 924
Query: 248 SSSR--LRHRA-------PSLRAP-RRSTLRVPASLASHPPQ 343
+ +H+A P +AP ++ P ASH PQ
Sbjct: 925 QQQQHPPKHQAQHPPQHQPQHQAPAQQPQAAYPPQPASHHPQ 966
>ref|NP_496193.1| putative nuclear protein, with a coiled coil domain (2K463)
[Caenorhabditis elegans] gi|1176797|sp|Q09556|YQW3_CAEEL
HYPOTHETICAL 40.9 KD PROTEIN F33H1.3 FROM CHROMOSOME II
gi|7500417|pir||T21705 hypothetical protein F33H1.3 -
Caenorhabditis elegans gi|3876593|emb|CAA88698.1|
Hypothetical protein F33H1.3 [Caenorhabditis elegans]
Length = 359
Score = 38.5 bits (88), Expect = 0.024
Identities = 30/88 (34%), Positives = 37/88 (41%), Gaps = 1/88 (1%)
Frame = +2
Query: 77 SHPRRFSPHQNTHVEPQTRHPGWLSRYPKRAATSHHSRTKSGAQPRPTPSNR*AKPASSS 256
S P R H + H HP S Y +HH + P+ SN A PA+ S
Sbjct: 240 SMPTRMPHHHHHH------HPHASSHYNPMGFQNHHEEAVISSAPQINRSNEPAAPATLS 293
Query: 257 RLRHRAPSLRAPRRSTLR-VPASLASHP 337
AP LR RR T++ VPA L P
Sbjct: 294 ----AAPELRNLRRETVKLVPAQLLRRP 317
>gb|AAC47557.1| insect intestinal mucin IIM22 [Trichoplusia ni]
Length = 807
Score = 38.1 bits (87), Expect = 0.031
Identities = 32/104 (30%), Positives = 41/104 (38%), Gaps = 3/104 (2%)
Frame = +1
Query: 49 TVTSKHTTLQPPTTVFPTPKHTRRAPDTTSRVAFSLS*TRRNEPPQPH*IWRTAATYSI* 228
T T TT Q PTT P T +AP TT++ + + P T +
Sbjct: 143 TTTQAPTTTQAPTTTTQAPTTTTQAPTTTTQAPTTTQAPTTTQAP--------TTTQAPT 194
Query: 229 QISQTSLILQAASPGAEPPRAT---AVHPTGTCQLSLTPTSASV 351
I+Q + A +P A P AT A P T PTSA V
Sbjct: 195 TITQAATTPAATTPAATTPAATTPAATTPAATTPGVPAPTSAPV 238
Score = 30.8 bits (68), Expect = 5.0
Identities = 30/89 (33%), Positives = 36/89 (39%), Gaps = 1/89 (1%)
Frame = +1
Query: 79 PPTTVFPTPKHTRRAPDTTSRVAFSLS*TRRNEPPQPH*IWRTAATYSI*QISQTSLILQ 258
PPTT PTP T AP A S T PP A T ++ +I T
Sbjct: 528 PPTTAIPTPAPT-AAPTAAPTTAAPESPTTVTVPPTA--APTAAPTTAVPEIPITVTSAP 584
Query: 259 AASPGAEPPRA-TAVHPTGTCQLSLTPTS 342
A+P A P A TA T ++ T TS
Sbjct: 585 TAAPTAAPTAAPTAAPTTAVPEIPTTVTS 613
>gb|AAC47556.1| insect intestinal mucin IIM14 [Trichoplusia ni]
Length = 788
Score = 38.1 bits (87), Expect = 0.031
Identities = 32/104 (30%), Positives = 41/104 (38%), Gaps = 3/104 (2%)
Frame = +1
Query: 49 TVTSKHTTLQPPTTVFPTPKHTRRAPDTTSRVAFSLS*TRRNEPPQPH*IWRTAATYSI* 228
T T TT Q PTT P T +AP TT++ + + P T +
Sbjct: 143 TTTQAPTTTQAPTTTTQAPTTTTQAPTTTTQAPTTTQAPTTTQAP--------TTTQAPT 194
Query: 229 QISQTSLILQAASPGAEPPRAT---AVHPTGTCQLSLTPTSASV 351
I+Q + A +P A P AT A P T PTSA V
Sbjct: 195 TITQAATTPAATTPAATTPAATTPAATTPAATTPGVPAPTSAPV 238
Score = 30.8 bits (68), Expect = 5.0
Identities = 30/89 (33%), Positives = 36/89 (39%), Gaps = 1/89 (1%)
Frame = +1
Query: 79 PPTTVFPTPKHTRRAPDTTSRVAFSLS*TRRNEPPQPH*IWRTAATYSI*QISQTSLILQ 258
PPTT PTP T AP A S T PP A T ++ +I T
Sbjct: 528 PPTTAIPTPAPT-AAPTAAPTTAAPESPTTVTVPPTA--APTAAPTTAVPEIPITVTSAP 584
Query: 259 AASPGAEPPRA-TAVHPTGTCQLSLTPTS 342
A+P A P A TA T ++ T TS
Sbjct: 585 TAAPTAAPTAAPTAAPTTAVPEIPTTVTS 613
>sp|P36286|POLN_SMSV1 Non-structural polyprotein [Contains: RNA-directed RNA polymerase ;
Thiol protease ; Helicase (2C like protein)]
gi|10141005|gb|AAA96501.2| non-structural polyprotein
[San Miguel sea lion virus]
Length = 1879
Score = 33.1 bits (74), Expect(2) = 0.092
Identities = 23/67 (34%), Positives = 29/67 (42%), Gaps = 6/67 (8%)
Frame = +2
Query: 83 PRRFSPHQNTHVEPQTRHPGWLSRYPKRAATSHHSRTKSGAQPR------PTPSNR*AKP 244
P+RF PHQ T P W+ R S H R A P+ P P R KP
Sbjct: 20 PKRFKPHQPT--------PTWMVRCGPLDHDSRHGRDPVRASPQAKRVRTPNPYPRHLKP 71
Query: 245 ASSSRLR 265
A+S+ +R
Sbjct: 72 AASAVVR 78
Score = 22.3 bits (46), Expect(2) = 0.092
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 283 PRATAVHPTGTCQLSLTPTSASVLCDG 363
P A+AV +GT L PTS V+ G
Sbjct: 71 PAASAVVRSGTNPSHLKPTSTDVVRSG 97
