KCC009219A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC009219A_C01 KCC009219A_c01
gctgacatcatttgcaaggggaccaacgtcaccgtttgcggtgtcactaagaatgaggag
gctggccgcatcatggctcaGTCCCTGCGCGAAGACTCCCTGTTCCAGGCCGCAGCCATC
CTTGGCATTGACACGGGCCGTTGCTACCCCGCCCTGAGCGGGTACACCTTCATCACCACC
CCTGCTCCCGGATACGACAACAGCCCGTGCACTCCGCAGCCGTCCGCGGTCCCCATGTGC
GGACCTGCACCTCCCAGCTGGCCTGAGTACCCCTCGTGCCGTGGCAAGAGCGCAAACGAC
TACTTCCAGTTCCTGGTTGGCACCCGGTACACGGTGGCCTACGGAGATAAGACCAGTGAA
TACTGCGTTCCTATCGAGATAAACGACATCAACGCTCAAGACGCGCGGGGCCAGACCTGC
TACGGCAAGAACCTGAACAAGGTTCAGTTCTACCTGGACTACAGCCGGCGCTACCAGATC
ACCGGCATTGCCATCAAGTACAACAACGGGTCTACCTTCACCCGTTCGCAGTCGTGGGGC
CCCGTGGGCAGCAACTCCCTCAAGATCACCAGTTTGGATTGGAGCGTGTCTGACGTGGCC
CGGCTGGAGCCCCAGATCTGnctcacgatcaagtcgg


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC009219A_C01 KCC009219A_c01
         (637 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAD22154.1| pherophorin-dz1 protein [Volvox carteri f. nagar...    72  7e-12
dbj|BAC57890.1| pherophorin [Volvox carteri f. nagariensis]            67  2e-10
sp|P81132|PER2_VOLCA PERPHORIN II gi|486935|pir||S36339 pheropho...    60  3e-08
ref|XP_039877.6| similar to Mucin 5B precursor (Mucin 5 subtype ...    57  2e-07
sp|Q9HC84|MU5B_HUMAN Mucin 5B precursor (Mucin 5 subtype B, trac...    56  4e-07

>emb|CAD22154.1| pherophorin-dz1 protein [Volvox carteri f. nagariensis]
          Length = 1009

 Score = 72.0 bits (175), Expect = 7e-12
 Identities = 60/202 (29%), Positives = 88/202 (42%), Gaps = 6/202 (2%)
 Frame = +1

Query: 13   CKGTNVTVCGVTKNE---EAGRIMAQSLREDSLFQAAAILGIDTGRCYPALSGYTFITTP 183
            C G  V +CGV  +    E  ++ A+ L   S +  AA  G     C   L GYT   T 
Sbjct: 778  CSGLEVRLCGVFASSVYAEDFKLTAEGLL--SYWIEAASGG---NVCSAELEGYTVQVTT 832

Query: 184  APGYDNSPCTPQPSAVPMCGPAPPSWPEYPSCRGKSANDYFQFLVGTRYTVAYGDKTS-E 360
                D + C P  S+V    P  P    +P+C   +      F V  R+T      T+ E
Sbjct: 833  ----DGNLCLPLLSSVSCNLPFTP----FPNCTCNTTQGILPFTVSPRFTTGNRTATTTE 884

Query: 361  YCVPIEINDINAQDARGQTCYGKN--LNKVQFYLDYSRRYQITGIAIKYNNGSTFTRSQS 534
            YC    +N I        TC   N  L K+++Y + +    + GI +   +G    RS S
Sbjct: 885  YC--FTVNTIPPSQIMPNTCGSANDTLTKIEWYANQNMSSWVAGINLYPASGPFVKRSSS 942

Query: 535  WGPVGSNSLKITSLDWSVSDVA 600
            WG  G+NSLK T ++WS++  +
Sbjct: 943  WGAAGTNSLKATPINWSIAQAS 964

>dbj|BAC57890.1| pherophorin [Volvox carteri f. nagariensis]
          Length = 606

 Score = 67.0 bits (162), Expect = 2e-10
 Identities = 55/206 (26%), Positives = 89/206 (42%), Gaps = 13/206 (6%)
 Frame = +1

Query: 13  CKGTNVTVCGVTKNEEAGRIMAQSLREDSLFQAAAILGIDTGR--CYPALSGYTFITTPA 186
           C GT   VCG     +   ++ Q++R +   +    L I TG   C P LSGY       
Sbjct: 352 CTGTQAIVCGKFLKGDLA-LLEQTVRSEIYQKVVKWLAIITGEGECKPQLSGYEVTVKTL 410

Query: 187 PGYDNSPCTPQPSAVPMC-----GPAPPSWPE--YPSCRGKSANDYFQFLVGTRYTVAYG 345
           PG   SP      A  +C      P PP  P   +P+C   +  +   + +   +     
Sbjct: 411 PGA--SPACIDVEAAVLCLIYDPPPPPPPLPPLPFPNCTCNTTQNIMPYKLSPTWYTTNS 468

Query: 346 DKT--SEYCVPIEINDINAQDARGQTCYGKN--LNKVQFYLDYSRRYQITGIAIKYNNGS 513
            ++  SEYC  + +  +  +     TC  KN  L K+++Y+D   R  + G  +    G 
Sbjct: 469 SRSYASEYCFTLSV--LPPELVVPSTCMSKNDTLAKLEWYIDERMRPAVKGFTLYPAVGP 526

Query: 514 TFTRSQSWGPVGSNSLKITSLDWSVS 591
           + T S SWG  G  +LK+ +L+W+ +
Sbjct: 527 SRTVSPSWGATGVQTLKV-NLNWNAT 551

>sp|P81132|PER2_VOLCA PERPHORIN II gi|486935|pir||S36339 pherophorin II - Volvox carteri
           (fragment) gi|6006628|emb|CAB56809.1| Pherophorin II
           [Volvox carteri]
          Length = 484

 Score = 60.1 bits (144), Expect = 3e-08
 Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 9/201 (4%)
 Frame = +1

Query: 13  CKGTNVTVCGVTKNEEAGRIMAQSLREDSLFQAAAILGIDTGR--CYPALSGYTFITTPA 186
           C  T +  CG     +   +   +L E    Q +A +G+ +G   C P L  YT +T   
Sbjct: 244 CFDTQIITCGRFNGSDTDALA--NLTEAVQQQLSAFIGVASGGNVCNPKLEKYT-VTVST 300

Query: 187 PGYDNSPCTPQPSAVPMCGPAPPSWPEYPSCRGKSANDYFQFLVGTRY-----TVAYGDK 351
                  C     +     P  P    +P+C   +      F V   +      V +G  
Sbjct: 301 INNVADQCLDLSQSASCFLPGVP----FPNCTCNTTQGVMPFTVSPTWYAQPANVRWGRN 356

Query: 352 TSEYCVPIEINDINAQDARGQTCYGKN--LNKVQFYLDYSRRYQITGIAIKYNNGSTFTR 525
            +EYC    +N +        TCY  N  L K+++Y   + R  + G  +    GS  T 
Sbjct: 357 VTEYC--FTVNTLQPSQVVPSTCYNANDALAKIEWYASDAFRSAVKGFTVYPAGGSNKTI 414

Query: 526 SQSWGPVGSNSLKITSLDWSV 588
           + SWG  G+++LK+ +L+W++
Sbjct: 415 ADSWGATGTDTLKV-NLNWNL 434

>ref|XP_039877.6| similar to Mucin 5B precursor (Mucin 5 subtype B, tracheobronchial)
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin) [Homo sapiens]
          Length = 5858

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 57/180 (31%), Positives = 79/180 (43%), Gaps = 9/180 (5%)
 Frame = +2

Query: 125  ALTRAVATPP*AGTPSSPP-LLPDTTTARALRSRPRSPCADLHLPAGLSTPRAVARAQTT 301
            A T + ATP      + PP +L  T T   + S   +P +       L   R+ A   T 
Sbjct: 2069 ASTGSTATPTSTLRTAPPPKVLTTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTA 2128

Query: 302  TSSSWLAP---GTRWPTEIRPVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTAGA 472
            TS + +     GT W T +    T       T +  T  + P TA T T  ++T TT GA
Sbjct: 2129 TSVTPIPSSSLGTTW-TRLSQTTTPT----ATMSTATPSSTPETAHTSTVLTATATTTGA 2183

Query: 473  TRSPALPSST-----TTGLPSPVRSRGAPWAATPSRSPVWIGACLTWPGWSPRSXSRSSR 637
            T S A PSST     TT +P+   +    + ATPS SP   G  LT P W   + + ++R
Sbjct: 2184 TGSVATPSSTPGTAHTTKVPTTTTT---GFTATPSSSP---GTALTPPVWISTTTTPTTR 2237

 Score = 56.2 bits (134), Expect = 4e-07
 Identities = 67/210 (31%), Positives = 90/210 (41%), Gaps = 8/210 (3%)
 Frame = +2

Query: 2    LTSFARGPTSPFAVSLRMRRLAASWLSPCAKTPCSRPQPSLALTRAVATPP*AGTP--SS 175
            LT+ A    S  + +        +W+     T  +   P+ +   A +T   AGTP  S+
Sbjct: 4520 LTTTATTTASTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVST 4579

Query: 176  PPLLPDTTTARALRSRPRSPCADLHLPAGLSTPRA-VARAQTTTSSSWLAPGTRWPTEIR 352
                P  T+++A  S   SP     LPA  ST     A + T   SS L  GT W T + 
Sbjct: 4580 TATTPTVTSSKATPSS--SPGTATALPALRSTATTPTATSFTAIPSSSL--GTTW-TRLS 4634

Query: 353  PVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTAGATRSPALPSST-----TTGLP 517
               T       T +  T  + P T  T T  ++T TT GAT S A PSST     TT +P
Sbjct: 4635 QTTTPT----ATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVP 4690

Query: 518  SPVRSRGAPWAATPSRSPVWIGACLTWPGW 607
            +   +    + ATPS SP   G  LT P W
Sbjct: 4691 TTTTT---GFTATPSSSP---GTALTPPVW 4714

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 57/194 (29%), Positives = 84/194 (42%), Gaps = 5/194 (2%)
 Frame = +2

Query: 71   SWLSPCAKTPCSRPQPSLALTRAVATPP*AGTP--SSPPLLPDTTTARALR-SRPRSPCA 241
            +W+     T  +   P+ +   A +T   AGTP  S+    P  T+++A   S P +  A
Sbjct: 2613 TWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATA 2672

Query: 242  DLHLPAGLSTPRAVARAQTTTSSSWLAPGTRWPTEIRPVNTAFLSR*TTSTLKTRGARPA 421
               L +  +TP A +     +SS     GT W T +    T       T +  T  + P 
Sbjct: 2673 LPALRSTATTPTATSFTAIPSSSL----GTTW-TRLSQTTTPT----ATMSTATPSSTPE 2723

Query: 422  TART*TRFSSTWTTAGATRSPALPSST--TTGLPSPVRSRGAPWAATPSRSPVWIGACLT 595
            T  T T  ++T TT GAT S A PSST  T      + +    + ATPS SP   G   T
Sbjct: 2724 TVHTSTVLTTTATTTGATGSVATPSSTPGTAHTTKVLTTTTTGFTATPSSSP---GTART 2780

Query: 596  WPGWSPRSXSRSSR 637
             P W   + + ++R
Sbjct: 2781 LPVWISTTTTPTTR 2794

 Score = 51.6 bits (122), Expect = 9e-06
 Identities = 56/192 (29%), Positives = 79/192 (40%), Gaps = 11/192 (5%)
 Frame = +2

Query: 26   TSPFAVSLRMRRLAASWLSPCAKTPCSRPQPSLALTRAVAT---PP*AGTPSSPPLLPDT 196
            TSP          A S  SP  +T  + P  +   T++ AT   P  + T  +   LP+ 
Sbjct: 4379 TSPATTPTATSSKATSSSSP--RTATTLPVLTSTATKSTATSVTPIPSSTLGTTGTLPEQ 4436

Query: 197  TT---ARALRSRPRSPCADLHLPAGLSTPRAVARAQTTTSSSWLAPGTRWPTEIRPVNTA 367
            TT   A      P S     H    L+T     RA ++TS+    PGT W   +  + TA
Sbjct: 4437 TTTPVATMSTIHPSSTPETTHTSTVLTTKATTTRATSSTSTPSSTPGTTW--ILTELTTA 4494

Query: 368  FLSR*TTSTLKTRGARPATART*TRFSSTWTTAGATRSPALPSST--TTGL---PSPVRS 532
              +   T    T  + P T    T  ++T TT  +T S A PSST  TT +   PS   +
Sbjct: 4495 ATTTAATGPTATPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTTWILTEPSTTAT 4554

Query: 533  RGAPWAATPSRS 568
               P  +T + S
Sbjct: 4555 VTVPTGSTATAS 4566

 Score = 50.1 bits (118), Expect = 3e-05
 Identities = 59/204 (28%), Positives = 81/204 (38%), Gaps = 16/204 (7%)
 Frame = +2

Query: 5    TSFARGPTSPFAVS-LRMRRLAASWLSPCAKTPCSRPQP---SLALTRAVATPP*AG--- 163
            TSF   P+S    +  R+ +      +    TP S P+    S  LT    T    G   
Sbjct: 4616 TSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTATATTTGATGSVA 4675

Query: 164  TPSSPP------LLPDTTTARALRSRPRSPCADLHLPAGLSTPRAVARAQTTTSSSWLAP 325
            TPSS P       +P TTT     +   SP   L  P  +ST         TTS S + P
Sbjct: 4676 TPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTP 4735

Query: 326  GT-RWPTEIRPVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTAGATRSPALPSST 502
             +    T    V T   +   T ++ T  +   T+ T    ++T TT  AT S   PSST
Sbjct: 4736 SSIPGTTHTARVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSST 4795

Query: 503  --TTGLPSPVRSRGAPWAATPSRS 568
              TT +   + S     AAT S++
Sbjct: 4796 PGTTPITPVLTSTATTPAATSSKA 4819

 Score = 48.5 bits (114), Expect = 8e-05
 Identities = 63/210 (30%), Positives = 82/210 (39%), Gaps = 25/210 (11%)
 Frame = +2

Query: 2    LTSFARGPTSPFAVSLRMRRLAASWL------SPCAK----TPCSRPQPSLALTRAVATP 151
            L S A  PT+     +    L  +W       +P A     TP S P+ +   T   AT 
Sbjct: 2119 LRSTATTPTATSVTPIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATA 2178

Query: 152  P*AG------TPSSPP------LLPDTTTARALRSRPRSPCADLHLPAGLSTPRA-VARA 292
               G      TPSS P       +P TTT     +   SP   L  P  +ST      R 
Sbjct: 2179 TTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRG 2238

Query: 293  QTTTSSSWLAPGTRWPTEIRPVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTAGA 472
             T T SS   PGT   T    V T   +   T ++ T  +   T+ T    ++T TT  A
Sbjct: 2239 STVTPSS--IPGT---THTATVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITA 2293

Query: 473  TRSPALPSST--TTGLPSPVRSRGAPWAAT 556
            T S   PSST  TT +P  + +     AAT
Sbjct: 2294 TGSTTNPSSTPGTTPIPPVLTTTATTPAAT 2323

 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 54/201 (26%), Positives = 78/201 (37%), Gaps = 15/201 (7%)
 Frame = +2

Query: 5    TSFARGPTSPFAVS-LRMRRLAASWLSPCAKTPCSRPQP---SLALTRAVATPP*AGTPS 172
            TSF   P+S    +  R+ +      +    TP S P+    S  LT    T    G+ +
Sbjct: 2686 TSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTATTTGATGSVA 2745

Query: 173  SPPLLPDT--------TTARALRSRPRS-PCADLHLPAGLSTPRAVARAQTTTSSSWLAP 325
            +P   P T        TT     + P S P     LP  +ST        +T + S +  
Sbjct: 2746 TPSSTPGTAHTTKVLTTTTTGFTATPSSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPG 2805

Query: 326  GTRWPTEIRPVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTAGATRSPALPSST- 502
             T  PT +    T       T ++ T  +   T+ T    ++T TT  AT S   PSST 
Sbjct: 2806 TTHTPTVLTTTTTTV----ATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTP 2861

Query: 503  -TTGLPSPVRSRGAPWAATPS 562
             TT +P  + +     AAT S
Sbjct: 2862 GTTPIPPVLTTTATTPAATSS 2882

 Score = 45.8 bits (107), Expect = 5e-04
 Identities = 53/177 (29%), Positives = 67/177 (36%), Gaps = 18/177 (10%)
 Frame = +2

Query: 95   TPCSRP-------QPSLALTRAVATPP*AGTPSSPP----LLPDTTTARALRSRPRSPCA 241
            TP S P       + + A T   AT P A TPSS P    +L + TT     +   S   
Sbjct: 4477 TPSSTPGTTWILTELTTAATTTAATGPTA-TPSSTPGTTWILTELTTTATTTASTGSTAT 4535

Query: 242  DLHLPAG---LSTPRAVARAQTTTSSSWLAPGTRWPTEIRPVNTAFLSR*TTSTLKTRGA 412
                P     L+ P   A     T S+  A  T+       V+T   +   TS+  T  +
Sbjct: 4536 PSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPSS 4595

Query: 413  RPATART*TRFSSTWTTAGATRSPALPSS----TTTGLPSPVRSRGAPWAATPSRSP 571
             P TA       ST TT  AT   A+PSS    T T L            ATPS +P
Sbjct: 4596 SPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTP 4652

 Score = 45.8 bits (107), Expect = 5e-04
 Identities = 56/201 (27%), Positives = 78/201 (37%), Gaps = 15/201 (7%)
 Frame = +2

Query: 5    TSFARGPTSPFAVS-LRMRRLAASWLSPCAKTPCSRPQP---SLALTRAVATPP*AG--- 163
            TSF   P+S    +  R+ +      +    TP S P+    S  LT    T    G   
Sbjct: 3888 TSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVA 3947

Query: 164  TPSSPP------LLPDTTTARALRSRPRSPCADLHLPAGLSTPRAVARAQTTTSSSWLAP 325
            TPSS P       +P TTT     +   SP      P  +ST      + +T + S +  
Sbjct: 3948 TPSSTPGTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSVPG 4007

Query: 326  GTRWPTEIRPVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTAGATRSPALPSST- 502
             T  PT +    T       T ++ T  +   T+ T     +T TT  AT S   PSST 
Sbjct: 4008 TTHTPTVLTTTTTTV----ATGSMATPSSSTQTSGTPPSLITTATTITATGSTTNPSSTP 4063

Query: 503  -TTGLPSPVRSRGAPWAATPS 562
             TT +P  + +     AAT S
Sbjct: 4064 GTTPIPPVLTTTATTPAATSS 4084

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 46/159 (28%), Positives = 59/159 (36%), Gaps = 7/159 (4%)
 Frame = +2

Query: 116  PSLALTRAVATPP*AGTPSSPPLLPDTTTARALRSRPRSPCADLHLPAG---LSTPRAVA 286
            PS   T + ATP  + TP +  +L   TT         S       P     L+ P   A
Sbjct: 3768 PSTPATSSTATP--SSTPGTTWILTKLTTTATTTESTGSTATPSSTPGTTWILTEPSTTA 3825

Query: 287  RAQTTTSSSWLAPGTRWPTEIRPVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTA 466
                 T S+  A  T+       V+T   +   TS+  T  + P TA       ST TT 
Sbjct: 3826 TVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTP 3885

Query: 467  GATRSPALPSS----TTTGLPSPVRSRGAPWAATPSRSP 571
             AT   A+PSS    T T L            ATPS +P
Sbjct: 3886 TATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTP 3924

 Score = 43.1 bits (100), Expect = 0.003
 Identities = 45/159 (28%), Positives = 59/159 (36%), Gaps = 7/159 (4%)
 Frame = +2

Query: 116  PSLALTRAVATPP*AGTPSSPPLLPDTTTARALRSRPRSPCADLHLPAG---LSTPRAVA 286
            PS   T + A P  + TP +  +L + TT         S       P     L+ P   A
Sbjct: 2566 PSTPATSSTAMP--SSTPGTTWILTELTTTATTTESTGSTATPSSTPGTTWILTEPSTTA 2623

Query: 287  RAQTTTSSSWLAPGTRWPTEIRPVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTA 466
                 T S+  A  T+       V+T   +   TS+  T  + P TA       ST TT 
Sbjct: 2624 TVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTP 2683

Query: 467  GATRSPALPSS----TTTGLPSPVRSRGAPWAATPSRSP 571
             AT   A+PSS    T T L            ATPS +P
Sbjct: 2684 TATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTP 2722

 Score = 42.7 bits (99), Expect = 0.004
 Identities = 58/193 (30%), Positives = 77/193 (39%), Gaps = 24/193 (12%)
 Frame = +2

Query: 2    LTSFARGPTSPFAVSLRMRRLAASWL------SPCAK----TPCSRPQP---SLALTRAV 142
            L S A  PT+    ++    L  +W       +P A     TP S P+    S  LT   
Sbjct: 3376 LRSTATTPTATSVTAIPSSSLGTAWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTT 3435

Query: 143  ATPP*AG---TPSSPP------LLPDTTTARALRSRPRSPCADLHLPAGLSTPRA-VARA 292
             T    G   TPSS P       +P TTT     +   SP   L  P  +ST      R 
Sbjct: 3436 TTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRG 3495

Query: 293  QTTTSSSWLAPGTRWPTEIRPVNTAFLSR*TTSTLKTRG-ARPATART*TRFSSTWTTAG 469
             T T SS   PGT         +TA +   TT+T+ T   A P         SS+  T+G
Sbjct: 3496 STVTPSS--IPGT--------THTATVLTTTTTTVATGSMATP---------SSSTQTSG 3536

Query: 470  ATRSPALPSSTTT 508
             T +P +P++T T
Sbjct: 3537 TTHTPPVPNTTAT 3549

 Score = 40.0 bits (92), Expect = 0.028
 Identities = 57/205 (27%), Positives = 77/205 (36%), Gaps = 15/205 (7%)
 Frame = +2

Query: 2    LTSFARGPTSPFAVSLRMRRLAASWLSPCAKTPCSRPQPSLALTRAVATPP*AG--TPSS 175
            + SF  G T              S + P + TP +    ++  T+A  T   +   TPSS
Sbjct: 3220 IPSFTLGTTGTLPEQTTTPMATMSTIHP-SSTPETTHTSTVLTTKATTTRATSSMSTPSS 3278

Query: 176  PP----LLPDTTTARALRSRPRSPCADLHLPAG----LSTPRAVARAQTTTSSSWLAPGT 331
             P    +L + TTA A  +    P A      G    L+ P   A     T S+  A  T
Sbjct: 3279 TPGTTWILTELTTA-ATTTAATGPTATPSSTPGTTWILTEPSTTATVTVPTGSTATASST 3337

Query: 332  RWPTEIRPVNTAFLSR*TT-STLKTRGARPATART*TRFSSTWTTAGATRSPALPSSTT- 505
            R       V T+  +  T  S+  T  + P TA       ST TT  AT   A+PSS+  
Sbjct: 3338 RATAGTLKVLTSTATTPTVISSRATPSSSPGTATALPALRSTATTPTATSVTAIPSSSLG 3397

Query: 506  ---TGLPSPVRSRGAPWAATPSRSP 571
               T L            ATPS +P
Sbjct: 3398 TAWTRLSQTTTPTATMSTATPSSTP 3422

 Score = 39.7 bits (91), Expect = 0.037
 Identities = 51/191 (26%), Positives = 73/191 (37%), Gaps = 14/191 (7%)
 Frame = +2

Query: 2    LTSFARGPTSPFAVSLRMRRLAASWLSPCAKTPCSRPQPSLALTRAVATPP*AGTPSSPP 181
            LTS A   T+     +    L  +W  P   T    P  +++     +TP    T +S  
Sbjct: 4834 LTSTATKSTATSFTPIPSSTLWTTWTVPAQTTT---PMSTMSTIHTSSTPE--TTHTSTV 4888

Query: 182  LLPDTTTARALRSR--PRSPCADLHLPAGLSTPRAVARAQTTTSSSWLAPGTRW-PTEIR 352
            L    T  RA  S   P S      +   L+T      A  +T++    PGT W  TE  
Sbjct: 4889 LTTTATMTRATNSTATPSSTLGTTRILTELTTTATTTAATGSTATLSSTPGTTWILTEPS 4948

Query: 353  PVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWT----------TAGATRSPA-LPSS 499
             + T  +   +T+T  +      T +  T  ++  T          T G TR+PA LPSS
Sbjct: 4949 TIATVMVPTGSTATASSTLGTAHTPKVVTTMATMPTATASTVPSSSTVGTTRTPAVLPSS 5008

Query: 500  TTTGLPSPVRS 532
              T   S V S
Sbjct: 5009 LPTFSVSTVSS 5019

 Score = 38.9 bits (89), Expect = 0.063
 Identities = 53/194 (27%), Positives = 73/194 (37%), Gaps = 39/194 (20%)
 Frame = +2

Query: 116  PSLALTRAVATPP*AGTPSSPPLLPDTTTARALRSRPRSPCADLHLPAGLSTPRAVARAQ 295
            PS   T + ATP  + TP +  +L + TTA    +   S       P     P+ +    
Sbjct: 3123 PSTPATSSTATP--SSTPGTTWILTEQTTAATTTATTGSTAIPSSTPGTAPPPKVLTSTA 3180

Query: 296  TT--------TSSSWLAPGTRWP-----------TEIRPV------NTAFLSR*TTSTLK 400
            TT        TSSS     T  P           T   P+       T  L   TT+ + 
Sbjct: 3181 TTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSFTPIPSFTLGTTGTLPEQTTTPMA 3240

Query: 401  TR-----GARPATART*TRFSSTWTTAGATRSPALPSST--TTGLPSPVRSRGAPWA--- 550
            T       + P T  T T  ++  TT  AT S + PSST  TT + + + +     A   
Sbjct: 3241 TMSTIHPSSTPETTHTSTVLTTKATTTRATSSMSTPSSTPGTTWILTELTTAATTTAATG 3300

Query: 551  --ATPSRSP--VWI 580
              ATPS +P   WI
Sbjct: 3301 PTATPSSTPGTTWI 3314

 Score = 36.6 bits (83), Expect = 0.31
 Identities = 46/174 (26%), Positives = 66/174 (37%), Gaps = 14/174 (8%)
 Frame = +2

Query: 89   AKTPCSRPQPSLALTRAV---ATPP*AGTPSSP------PLLPDTTTARALRSRPRSPCA 241
            + TP + P P +  + A    AT   A + SSP      P+L  T T     S    P  
Sbjct: 3164 SSTPGTAPPPKVLTSTATTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSFTPIPSF 3223

Query: 242  DLHLPAGLSTPRAVARAQTTTSSSWLAPGTRWPTEIRPVNTAFLSR*TTSTLKTRGARPA 421
             L     L        A  +T      P T   + +  + T   +   TS++ T  + P 
Sbjct: 3224 TLGTTGTLPEQTTTPMATMSTIHPSSTPETTHTSTV--LTTKATTTRATSSMSTPSSTPG 3281

Query: 422  TART*TRFSSTWTTAGATRSPALPSST--TTGL---PSPVRSRGAPWAATPSRS 568
            T    T  ++  TT  AT   A PSST  TT +   PS   +   P  +T + S
Sbjct: 3282 TTWILTELTTAATTTAATGPTATPSSTPGTTWILTEPSTTATVTVPTGSTATAS 3335

 Score = 35.8 bits (81), Expect = 0.54
 Identities = 47/156 (30%), Positives = 58/156 (37%), Gaps = 15/156 (9%)
 Frame = +2

Query: 95   TPCSRPQ-------PSLALTRAVATPP*A-GTPSSPPLLPDTTTARALRSR---PRSPCA 241
            TP S P        P+   T    TP  + GT  +PP+   TTT          P S   
Sbjct: 3948 TPSSTPGTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSVPG 4007

Query: 242  DLHLPAGLSTPRAVAR--AQTTTSSSWLAPGTRWPTEIRPVNTAFLSR*TTSTLKTRGAR 415
              H P  L+T        +  T SSS    GT  P+ I    T   +  TT+   T G  
Sbjct: 4008 TTHTPTVLTTTTTTVATGSMATPSSSTQTSGTP-PSLITTATTITATGSTTNPSSTPGTT 4066

Query: 416  PATART*TRFSSTWTTAGATRSPALPSST--TTGLP 517
            P         ++T TT  AT S   PSS   TT  P
Sbjct: 4067 PIPPV----LTTTATTPAATSSTVTPSSALGTTHTP 4098

 Score = 35.4 bits (80), Expect = 0.70
 Identities = 43/156 (27%), Positives = 61/156 (38%), Gaps = 1/156 (0%)
 Frame = +2

Query: 110  PQPSLALTRAVATPP*AGTPSSPPLLPDTTTARALRSRPRSPCADLHLPAGLSTPRAVAR 289
            P P+  L  A  T   A   +  P    T++    R+ P S  A   L  GL++PR  + 
Sbjct: 1761 PPPTTELETATTTTTQALFSTPQP----TSSPGLTRAPPASTTAVPTLSEGLTSPRYTST 1816

Query: 290  AQTTTSSSWLAP-GTRWPTEIRPVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTA 466
              T T+     P G+  PT         +    TSTL TR A P T    T    TW   
Sbjct: 1817 LGTATTGGPTTPAGSTEPT---------VPGVATSTLPTRSALPGT----TGSLGTW--- 1860

Query: 467  GATRSPALPSSTTTGLPSPVRSRGAPWAATPSRSPV 574
                 P+ P +      +  R+R    A+T S+ P+
Sbjct: 1861 ----RPSQPPTLAPTTMATSRARPTGTASTASKEPL 1892

>sp|Q9HC84|MU5B_HUMAN Mucin 5B precursor (Mucin 5 subtype B, tracheobronchial) (High
            molecular weight salivary mucin MG1) (Sublingual gland
            mucin)
          Length = 5703

 Score = 56.2 bits (134), Expect = 4e-07
 Identities = 56/178 (31%), Positives = 78/178 (43%), Gaps = 9/178 (5%)
 Frame = +2

Query: 131  TRAVATPP*AGTPSSPP-LLPDTTTARALRSRPRSPCADLHLPAGLSTPRAVARAQTTTS 307
            T + ATP      + PP +L  T T   + S   +P +       L   R+ A   T TS
Sbjct: 2449 TGSTATPTSTLRTAPPPKVLTTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATS 2508

Query: 308  SSWLAP---GTRWPTEIRPVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTAGATR 478
             + +     GT W T +    T       T +  T  + P TA T T  ++T TT GAT 
Sbjct: 2509 VTPIPSSSLGTTW-TRLSQTTTPT----ATMSTATPSSTPETAHTSTVLTATATTTGATG 2563

Query: 479  SPALPSST-----TTGLPSPVRSRGAPWAATPSRSPVWIGACLTWPGWSPRSXSRSSR 637
            S A PSST     TT +P+   +    + ATPS SP   G  LT P W   + + ++R
Sbjct: 2564 SVATPSSTPGTAHTTKVPTTTTT---GFTATPSSSP---GTALTPPVWISTTTTPTTR 2615

 Score = 56.2 bits (134), Expect = 4e-07
 Identities = 67/210 (31%), Positives = 90/210 (41%), Gaps = 8/210 (3%)
 Frame = +2

Query: 2    LTSFARGPTSPFAVSLRMRRLAASWLSPCAKTPCSRPQPSLALTRAVATPP*AGTP--SS 175
            LT+ A    S  + +        +W+     T  +   P+ +   A +T   AGTP  S+
Sbjct: 4365 LTTTATTTASTGSTATLSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVST 4424

Query: 176  PPLLPDTTTARALRSRPRSPCADLHLPAGLSTPRA-VARAQTTTSSSWLAPGTRWPTEIR 352
                P  T+++A  S   SP     LPA  ST     A + T   SS L  GT W T + 
Sbjct: 4425 TATTPTVTSSKATPSS--SPGTATALPALRSTATTPTATSFTAIPSSSL--GTTW-TRLS 4479

Query: 353  PVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTAGATRSPALPSST-----TTGLP 517
               T       T +  T  + P T  T T  ++T TT GAT S A PSST     TT +P
Sbjct: 4480 QTTTPT----ATMSTATPSSTPETVHTSTVLTTTATTTGATGSVATPSSTPGTAHTTKVP 4535

Query: 518  SPVRSRGAPWAATPSRSPVWIGACLTWPGW 607
            +   +    + ATPS SP   G  LT P W
Sbjct: 4536 TTTTT---GFTATPSSSP---GTALTPPVW 4559

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 60/204 (29%), Positives = 82/204 (39%), Gaps = 16/204 (7%)
 Frame = +2

Query: 5    TSFARGPTSPFAVS-LRMRRLAASWLSPCAKTPCSRPQP---SLALTRAVATPP*AG--- 163
            TSF   P+S    +  R+ +      +    TP S P+    S  LT    T    G   
Sbjct: 4461 TSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTATTTGATGSVA 4520

Query: 164  TPSSPP------LLPDTTTARALRSRPRSPCADLHLPAGLSTPRAVARAQTTTSSSWLAP 325
            TPSS P       +P TTT     +   SP   L  P  +ST         TTS S + P
Sbjct: 4521 TPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTP 4580

Query: 326  GT-RWPTEIRPVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTAGATRSPALPSST 502
             +    T    V T   +   T ++ T  +   T+ T    ++T TT  AT S   PSST
Sbjct: 4581 SSIPGTTHTARVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSST 4640

Query: 503  --TTGLPSPVRSRGAPWAATPSRS 568
              TT +P  + S     AAT S++
Sbjct: 4641 PGTTPIPPVLTSMATTPAATSSKA 4664

 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 57/192 (29%), Positives = 77/192 (39%), Gaps = 21/192 (10%)
 Frame = +2

Query: 95   TPCSRPQPSLALTR------------AVATPP*A-GTPSSPPLLPDTTTARALRSRPRSP 235
            TP S P  +  LT+            + ATP    G P+  P +  T T   + S   +P
Sbjct: 3652 TPSSTPGTTWILTKLTTTATTTESTGSTATPSSTQGPPAGTPHVSTTATTPTVTSSKATP 3711

Query: 236  CADLHLPAGLSTPRAVARAQTTTSSSWLAP---GTRWPTEIRPVNTAFLSR*TTSTLKTR 406
             +       L   R+ A   T TS + +     GT W T +    T       T +  T 
Sbjct: 3712 FSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTW-TRLSQTTTPM----ATMSTATP 3766

Query: 407  GARPATART*TRFSSTWTTAGATRSPALPSST-----TTGLPSPVRSRGAPWAATPSRSP 571
             + P T  T T  ++T TT GAT S A PSST     TT +P+   +    +  TPS SP
Sbjct: 3767 SSTPETVHTSTVLTTTATTTGATGSVATPSSTPGTAHTTKVPTTTTT---GFTVTPSSSP 3823

Query: 572  VWIGACLTWPGW 607
               G   T P W
Sbjct: 3824 ---GTARTPPVW 3832

 Score = 51.6 bits (122), Expect = 9e-06
 Identities = 56/194 (28%), Positives = 83/194 (41%), Gaps = 5/194 (2%)
 Frame = +2

Query: 71   SWLSPCAKTPCSRPQPSLALTRAVATPP*AGTP--SSPPLLPDTTTARALR-SRPRSPCA 241
            +W+     T  +    + +   A +T   AGTP  S+    P  T+++A   S P +  A
Sbjct: 1905 TWILTKPTTTATTTASTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPFSSPGTATA 1964

Query: 242  DLHLPAGLSTPRAVARAQTTTSSSWLAPGTRWPTEIRPVNTAFLSR*TTSTLKTRGARPA 421
               L +  +TP A +     +SS     GT W T +    T       T +  T  + P 
Sbjct: 1965 LPALRSTATTPTATSFTAIPSSSL----GTTW-TRLSQTTTPM----ATMSTATPSSTPE 2015

Query: 422  TART*TRFSSTWTTAGATRSPALPSST--TTGLPSPVRSRGAPWAATPSRSPVWIGACLT 595
            T  T T  ++T TT GAT S A PSST  T      + +    + ATPS SP   G   T
Sbjct: 2016 TVHTSTVLTTTATTTGATGSVATPSSTPGTAHTTKVLTTTTTGFTATPSSSP---GRART 2072

Query: 596  WPGWSPRSXSRSSR 637
             P W   + + ++R
Sbjct: 2073 LPVWISTTTTPTTR 2086

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 64/211 (30%), Positives = 83/211 (39%), Gaps = 24/211 (11%)
 Frame = +2

Query: 2    LTSFARGPTSPFAVSLRMRRLAASWL------SPCAK----TPCSRPQP---SLALTRAV 142
            L S A  PT+    ++    L  +W       +P A     TP S P+    S  LT   
Sbjct: 3196 LRSTATTPTATSVTAIPSSSLGTAWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTA 3255

Query: 143  ATPP*AG--TPSSPP------LLPDTTTARALRSRPRSPCADLHLPAGLSTPRA-VARAQ 295
             T       TPSS P       +P TTT     +   SP   L  P  +ST      R  
Sbjct: 3256 TTTRTGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGS 3315

Query: 296  TTTSSSWLAPGTRWPTEIRPVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTAGAT 475
            T T SS   PGT   T    V T   +   T ++ T  +   T+ T    ++T TT  AT
Sbjct: 3316 TVTPSS--IPGT---THTATVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITAT 3370

Query: 476  RSPALPSST--TTGLPSPVRSRGAPWAATPS 562
             S   PSST  TT +P  + +     AAT S
Sbjct: 3371 GSTTNPSSTPGTTPIPPVLTTTATTPAATSS 3401

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 63/212 (29%), Positives = 82/212 (37%), Gaps = 25/212 (11%)
 Frame = +2

Query: 2    LTSFARGPTSPFAVSLRMRRLAASWL------SPCAK----TPCSRPQPSLALTRAVATP 151
            L S A  PT+     +    L  +W       +P A     TP S P+ +   T   AT 
Sbjct: 2497 LRSTATTPTATSVTPIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATA 2556

Query: 152  P*AG------TPSSPP------LLPDTTTARALRSRPRSPCADLHLPAGLSTPRA-VARA 292
               G      TPSS P       +P TTT     +   SP   L  P  +ST      R 
Sbjct: 2557 TTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRG 2616

Query: 293  QTTTSSSWLAPGTRWPTEIRPVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTAGA 472
             T T SS   PGT   T    V T   +   T ++ T  +   T+ T    ++T TT  A
Sbjct: 2617 STVTPSS--IPGT---THTATVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITA 2671

Query: 473  TRSPALPSST--TTGLPSPVRSRGAPWAATPS 562
            T S   PSST  T  +P  + +     AAT S
Sbjct: 2672 TGSTTNPSSTPGTRPIPPVLTTTATTPAATSS 2703

 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 54/201 (26%), Positives = 78/201 (37%), Gaps = 15/201 (7%)
 Frame = +2

Query: 5    TSFARGPTSPFAVS-LRMRRLAASWLSPCAKTPCSRPQP---SLALTRAVATPP*AGTPS 172
            TSF   P+S    +  R+ +      +    TP S P+    S  LT    T    G+ +
Sbjct: 1978 TSFTAIPSSSLGTTWTRLSQTTTPMATMSTATPSSTPETVHTSTVLTTTATTTGATGSVA 2037

Query: 173  SPPLLPDT--------TTARALRSRPRS-PCADLHLPAGLSTPRAVARAQTTTSSSWLAP 325
            +P   P T        TT     + P S P     LP  +ST        +T + S +  
Sbjct: 2038 TPSSTPGTAHTTKVLTTTTTGFTATPSSSPGRARTLPVWISTTTTPTTRGSTVTPSSIPG 2097

Query: 326  GTRWPTEIRPVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTAGATRSPALPSST- 502
             T  PT +    T       T ++ T  +   T+ T    ++T TT  AT S   PSST 
Sbjct: 2098 TTHTPTVLTTTTTTV----ATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTP 2153

Query: 503  -TTGLPSPVRSRGAPWAATPS 562
             TT +P  + +     AAT S
Sbjct: 2154 GTTPIPPVLTTTATTPAATSS 2174

 Score = 45.4 bits (106), Expect = 7e-04
 Identities = 59/205 (28%), Positives = 84/205 (40%), Gaps = 19/205 (9%)
 Frame = +2

Query: 5    TSFARGPTSPFAVS-LRMRRLAASWLSPCAKTPCSRPQP---SLALTRAVATPP*AG--- 163
            TSF   P+S    +  R+ +      +    TP S P+    S  LT    T    G   
Sbjct: 3734 TSFTAIPSSSLGTTWTRLSQTTTPMATMSTATPSSTPETVHTSTVLTTTATTTGATGSVA 3793

Query: 164  TPSSPP------LLPDTTTARALRSRPRSPCADLHLPAGLSTPRAVARAQTTTSSSWLAP 325
            TPSS P       +P TTT     +   SP      P  +ST      + +T + S +  
Sbjct: 3794 TPSSTPGTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSIPG 3853

Query: 326  GTRWPTEI----RPVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTAGATRSPALP 493
             T  PT +    +PV T  ++  ++ST +T G  P+         +T TT  AT S   P
Sbjct: 3854 TTHTPTVLTTTTQPVATGSMATPSSST-QTSGTPPSLI-------TTATTITATGSTTNP 3905

Query: 494  SST--TTGLPSPVRSRGAPWAATPS 562
            SST  TT +P  + +     AAT S
Sbjct: 3906 SSTPGTTPIPPELTTTATTPAATSS 3930

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 56/177 (31%), Positives = 74/177 (41%), Gaps = 19/177 (10%)
 Frame = +2

Query: 95   TPCSRPQPSLALT--RAVATPP*AGTPSSPPL---------LPDTTTARALRSR--PRSP 235
            TP S P  + AL   R+ AT P A + ++ P          L  TTT  A  S   P S 
Sbjct: 3710 TPFSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTPMATMSTATPSST 3769

Query: 236  CADLHLPAGLSTPRAVARAQTTTSSSWLAPGTRWPTEIRPVNTAFLSR*TTSTLKTRGAR 415
               +H    L+T      A  + ++    PGT   T++ P  T      TT    T  + 
Sbjct: 3770 PETVHTSTVLTTTATTTGATGSVATPSSTPGTAHTTKV-PTTT------TTGFTVTPSSS 3822

Query: 416  PATART*TRFSSTWTTAGATRSPALPSST--TTGLPSPVRSRGAPWA----ATPSRS 568
            P TART   + ST TT   + S   PSS   TT  P+ + +   P A    ATPS S
Sbjct: 3823 PGTARTPPVWISTTTTPTTSGSTVTPSSIPGTTHTPTVLTTTTQPVATGSMATPSSS 3879

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 51/176 (28%), Positives = 64/176 (35%), Gaps = 17/176 (9%)
 Frame = +2

Query: 95   TPCSRPQPSLALTR---AVATPP*AGTPSSPPLLPDTT------TARALRSRPRSPCADL 247
            TP S P  +  LT    A  T    G  ++P   P TT      T  A  +      A L
Sbjct: 4322 TPSSTPGTTWILTELTTAATTTAGTGPTATPSSTPGTTWILTELTTTATTTASTGSTATL 4381

Query: 248  HLPAG----LSTPRAVARAQTTTSSSWLAPGTRWPTEIRPVNTAFLSR*TTSTLKTRGAR 415
                G    L+ P   A     T S+  A  T+       V+T   +   TS+  T  + 
Sbjct: 4382 SSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVTSSKATPSSS 4441

Query: 416  PATART*TRFSSTWTTAGATRSPALPSS----TTTGLPSPVRSRGAPWAATPSRSP 571
            P TA       ST TT  AT   A+PSS    T T L            ATPS +P
Sbjct: 4442 PGTATALPALRSTATTPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSSTP 4497

 Score = 40.8 bits (94), Expect = 0.017
 Identities = 57/191 (29%), Positives = 74/191 (37%), Gaps = 14/191 (7%)
 Frame = +2

Query: 2    LTSFARGPTSPFAVSLRMRRLAASWLSPCAKTPCSRPQPSLALTRAVATPP*AGTPSSPP 181
            LTS A   T+     +    L  +W  P   T    P  +++     +TP    T +S  
Sbjct: 4679 LTSTATKSTATSFTPIPSSTLWTTWTVPAQTTT---PMSTMSTIHTSSTPE--TTHTSTV 4733

Query: 182  LLPDTTTARALRSR--PRSPCADLHLPAGLSTPRAVARAQTTTSSSWLAPGTRW----PT 343
            L    T  RA  S   P S      +   L+T      A  +T++    PGT W    P+
Sbjct: 4734 LTTTATMTRATNSTATPSSTLGTTRILTELTTTATTTAATGSTATLSSTPGTTWILTEPS 4793

Query: 344  EIRPVNTAFLSR*TTS----TLKTRGARPATART*TRFSST---WTTAGATRSPA-LPSS 499
             I  V     S  TTS    T  T     A A   T  +ST    +T G TR+PA LPSS
Sbjct: 4794 TIATVMVPTGSTATTSSTLGTAHTPKVVTAMATMPTATASTVPSSSTVGTTRTPAVLPSS 4853

Query: 500  TTTGLPSPVRS 532
              T   S V S
Sbjct: 4854 LPTFSVSTVSS 4864

 Score = 39.3 bits (90), Expect = 0.048
 Identities = 49/186 (26%), Positives = 70/186 (37%), Gaps = 34/186 (18%)
 Frame = +2

Query: 116  PSLALTRAVATPP*AGTPSSPPLLPDTTTARALRSRPRSPCADLHLPAGLSTPRAVARAQ 295
            PS   T + ATP  + TP +  +L + TTA    +   S       P     P+ +    
Sbjct: 2944 PSTPATSSTATP--SSTPGTTWILTEQTTAATTTATTGSTAIPSSTPGTAPPPKVLTSQA 3001

Query: 296  TT--------TSSSWLAPGTRWP-----------TEIRPVNTAFLSR*TTSTLKTR---- 406
            TT        TSSS     T  P           T   P+ ++ L   TT T + R    
Sbjct: 3002 TTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSFTPIPSSTLG--TTGTSQNRPPHP 3059

Query: 407  ---------GARPATART*TRFSSTWTTAGATRSPALPSST--TTGLPSPVRSRGAPWAA 553
                      + P T  T T  ++  TT  AT S + PSST  TT + + + +     AA
Sbjct: 3060 MATMSTIHPSSTPETTHTSTVLTTKATTTRATSSMSTPSSTPGTTWILTELTTAATTTAA 3119

Query: 554  TPSRSP 571
             P  +P
Sbjct: 3120 LPHGTP 3125

 Score = 39.3 bits (90), Expect = 0.048
 Identities = 59/205 (28%), Positives = 86/205 (41%), Gaps = 23/205 (11%)
 Frame = +2

Query: 26   TSPFAVSLRMRRLAASWLSPCAKTPCSRPQPSLALTRAVATPP*AGTPSSPPLLPDTTTA 205
            T+P A S +    A S  SP  +T  + P  +   T++ AT   + TP     L  T T+
Sbjct: 3002 TTPTATSSK----ATSSSSP--RTATTLPVLTSTATKSTAT---SFTPIPSSTLGTTGTS 3052

Query: 206  RALRSRPRSPCADL------------HLPAGLSTPRAVARAQTTTSSSWLAPGTRW-PTE 346
            +   +RP  P A +            H    L+T     RA ++ S+    PGT W  TE
Sbjct: 3053 Q---NRPPHPMATMSTIHPSSTPETTHTSTVLTTKATTTRATSSMSTPSSTPGTTWILTE 3109

Query: 347  IRPVNTAFLSR*TTSTLKTRG-----ARPATART*TRFSSTWTTAGATRSPA-----LPS 496
            +    T   +    +   T G       P+T  T T  + +  TA +TR+ A     L S
Sbjct: 3110 LTTAATTTAALPHGTPSSTPGTTWILTEPSTTATVTVPTGSTATASSTRATAGTLKVLTS 3169

Query: 497  STTTGLPSPVRSRGAPWAATPSRSP 571
            + TT  P+ + SR     ATPS SP
Sbjct: 3170 TATT--PTVISSR-----ATPSSSP 3187

 Score = 38.1 bits (87), Expect = 0.11
 Identities = 47/173 (27%), Positives = 67/173 (38%), Gaps = 14/173 (8%)
 Frame = +2

Query: 95   TPCSRPQ-------PSLALTRAVATPP*A-GTPSSPPLLPDTTTARALRSRPRSPCADLH 250
            TP S P        P+   T   ATP  + GT  +PP+   TTT    R    +P +   
Sbjct: 3265 TPSSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSS--- 3321

Query: 251  LPAGLSTPRAVARAQTTTSSSWLA-PGTRWPTEIRPVNTAFLSR*TTSTLKTRG--ARPA 421
            +P    T   +    TT ++  +A P +   T   P +    +   T+T  T    + P 
Sbjct: 3322 IPGTTHTATVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPG 3381

Query: 422  TART*TRFSSTWTTAGATRSPALPSS---TTTGLPSPVRSRGAPWAATPSRSP 571
            T       ++T TT  AT S   PSS   TT   P P  +      + P  SP
Sbjct: 3382 TTPIPPVLTTTATTPAATSSTVTPSSALGTTHTPPVPNTTATTHGRSLPPSSP 3434

 Score = 37.7 bits (86), Expect = 0.14
 Identities = 52/185 (28%), Positives = 72/185 (38%), Gaps = 15/185 (8%)
 Frame = +2

Query: 89   AKTPCSRPQPSLALTRAV---ATPP*AGTPSSP------PLLPDTTTARALRSRPRSPCA 241
            + TP + P P +  + A    AT   A + SSP      P+L  T T     S    P +
Sbjct: 4212 SSTPGTAPPPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTSTATKSTATSVTPIPSS 4271

Query: 242  DLH----LPAGLSTPRAVARAQTTTSSSWLAPGTRWPTEIRPVNTAFLSR*TTSTLKTRG 409
             L     LP   +TP  VA   T   SS     T   T    V T   +   TS+  T  
Sbjct: 4272 TLGTTGTLPEQTTTP--VATMSTIHPSS-----TPETTHTSTVLTTKATTRATSSTSTPS 4324

Query: 410  ARPATART*TRFSSTWTTAGATRSPALPSST--TTGLPSPVRSRGAPWAATPSRSPVWIG 583
            + P T    T  ++  TT   T   A PSST  TT + + + +     A+T S + +   
Sbjct: 4325 STPGTTWILTELTTAATTTAGTGPTATPSSTPGTTWILTELTTTATTTASTGSTATLSST 4384

Query: 584  ACLTW 598
               TW
Sbjct: 4385 PGTTW 4389

 Score = 36.6 bits (83), Expect = 0.31
 Identities = 45/157 (28%), Positives = 62/157 (38%), Gaps = 10/157 (6%)
 Frame = +2

Query: 131  TRAVATPP*AGTPSSPPLLPD-----TTTARALRSRPRSPCADLHLPAGLSTPRAVARAQ 295
            T +++TP  + TP +  +L +     TTTA      P S      +   L+ P   A   
Sbjct: 3091 TSSMSTP--SSTPGTTWILTELTTAATTTAALPHGTPSSTPGTTWI---LTEPSTTATVT 3145

Query: 296  TTTSSSWLAPGTRWPTEIRPVNTAFLSR*TT-STLKTRGARPATART*TRFSSTWTTAGA 472
              T S+  A  TR       V T+  +  T  S+  T  + P TA       ST TT  A
Sbjct: 3146 VPTGSTATASSTRATAGTLKVLTSTATTPTVISSRATPSSSPGTATALPALRSTATTPTA 3205

Query: 473  TRSPALPSSTT----TGLPSPVRSRGAPWAATPSRSP 571
            T   A+PSS+     T L            ATPS +P
Sbjct: 3206 TSVTAIPSSSLGTAWTRLSQTTTPTATMSTATPSSTP 3242

 Score = 34.3 bits (77), Expect = 1.6
 Identities = 47/165 (28%), Positives = 67/165 (40%), Gaps = 15/165 (9%)
 Frame = +2

Query: 89   AKTPCSRPQPSL--------ALTRAVATPP*A-GTPSSPPLLPDTTTARALRSRPRS--- 232
            + TP + P P +        A T +  TP  A GT  +PP+ P+TT     RS P S   
Sbjct: 3377 SSTPGTTPIPPVLTTTATTPAATSSTVTPSSALGTTHTPPV-PNTTATTHGRSLPPSSPH 3435

Query: 233  --PCADLHLPAGLSTPRAVARAQTTTSSSWLA-PGTRWPTEIRPVNTAFLSR*TTSTLKT 403
              P A     +G+     +    T TS +  A  GT  P+     +    SR T S    
Sbjct: 3436 TVPTAWTSATSGILGTTHITEPSTGTSHTPAATTGTTQPSTPALSSPHPSSRTTESPPSP 3495

Query: 404  RGARPATART*TRFSSTWTTAGATRSPALPSSTTTGLPSPVRSRG 538
                P   R  +R ++T T +    S  LPSS T+   + V + G
Sbjct: 3496 GTTTPGHTRGTSRTTATATPSKTRTSTLLPSSPTSAPITTVVTTG 3540

 Score = 33.9 bits (76), Expect = 2.0
 Identities = 43/156 (27%), Positives = 61/156 (38%), Gaps = 1/156 (0%)
 Frame = +2

Query: 110  PQPSLALTRAVATPP*AGTPSSPPLLPDTTTARALRSRPRSPCADLHLPAGLSTPRAVAR 289
            P P+  L  A  T   A   +  P    T++    R+ P S  A   L  GL++PR  + 
Sbjct: 1611 PPPTTELETATTTTTQALFSTPQP----TSSPGLTRAPPASTTAVPTLSEGLTSPRYTST 1666

Query: 290  AQT-TTSSSWLAPGTRWPTEIRPVNTAFLSR*TTSTLKTRGARPATART*TRFSSTWTTA 466
              T TT     + G+  PT         +    TSTL TR A P T    T    TW   
Sbjct: 1667 LGTATTGGPRQSAGSTEPT---------VPGVATSTLPTRSALPGT----TGSLGTW--- 1710

Query: 467  GATRSPALPSSTTTGLPSPVRSRGAPWAATPSRSPV 574
                 P+ P +      +  R+R    A+T S+ P+
Sbjct: 1711 ----RPSQPPTLAPTTMATSRARPTGTASTASKEPL 1742



EST assemble image


clone accession position
1 MXL025e06_r BP094602 1 432
2 MX237h07_r BP091382 199 637




Chlamydomonas reinhardtii
Kazusa DNA Research Institute