KCC008335A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC008335A_C01 KCC008335A_c01
cttgatattgtaagaagatatatttgtgcacagtacacaAGATGCAGACCATTCGTGCCC
CTGCTCGCGCTCCCGTCGCCTCGTCTGCTGTGGGTGGCTACCTTCCGCGCTGCTCCCCGC
GTTTCTCGCACCCCTGTGGTCGTCGTGCGCGCTGAGCTGAAGGTCGGCGAGAAGCTGGAG
GACTACCCCAACTACTACAAGGTGCTCAAGACCTCCGAGGGCAAGACCATCTCGCTGTCT
TCCTACAAGGGCAAGCAGCCCATTGTTCTGTTCTTCTACCCCAAGGCTGCCACCCCCGGC
TGCACCAAGGAGGCTTGCCGCTTCCGTGACGAGTACAGCCGCTTCACTGCCGCCGGCGCC
GTCGTGTTCGGCATCAGCTCGGACTCGCCCGCTGACAACGCCGCCTTCGGCAAGGCCAAC
AACCTGCCTTACCCGCTGGTCACCGATGAGAACTCCATCCTGCGCAAGCACTTCGGCATC
AAGGGCGACTTCCTGGGTCTGATGACGGGCCTGCAGATGTATGTGATCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC008335A_C01 KCC008335A_c01
         (529 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_189235.1| peroxiredoxin -related [Arabidopsis thaliana] g...   119  3e-26
gb|AAQ67661.1| peroxiredoxin Q [Suaeda maritima subsp. salsa]         114  1e-24
dbj|BAA90524.1| peroxiredoxin Q [Sedum lineare]                       114  1e-24
ref|NP_487223.1| bacterioferritin comigratory protein [Nostoc sp...   102  3e-21
gb|AAO53197.1| similar to Anabaena sp. (strain PCC 7120). Bacter...   102  4e-21

>ref|NP_189235.1| peroxiredoxin -related [Arabidopsis thaliana]
           gi|9279611|dbj|BAB01069.1| peroxiredoxin Q-like protein
           [Arabidopsis thaliana] gi|15081743|gb|AAK82526.1|
           AT3g26060/MPE11_21 [Arabidopsis thaliana]
           gi|18252273|gb|AAL62017.1| AT3g26060/MPE11_21
           [Arabidopsis thaliana]
          Length = 216

 Score =  119 bits (297), Expect = 3e-26
 Identities = 59/129 (45%), Positives = 79/129 (60%)
 Frame = +1

Query: 142 VVRAELKVGEKLEDYPNYYKVLKTSEGKTISLSSYKGKQPIVLFFYPKAATPGCTKEACR 321
           ++ A++  G+   D+      LK   GK +SL  YKGK P+VL+FYP   TPGCTK+AC 
Sbjct: 64  LIFAKVNKGQAAPDF-----TLKDQNGKPVSLKKYKGK-PVVLYFYPADETPGCTKQACA 117

Query: 322 FRDEYSRFTAAGAVVFGISSDSPADNAAFGKANNLPYPLVTDENSILRKHFGIKGDFLGL 501
           FRD Y +F  AGA V GIS D  A + AF     LPY L++DE + +RK +G+ GD  G 
Sbjct: 118 FRDSYEKFKKAGAEVIGISGDDSASHKAFASKYKLPYTLLSDEGNKVRKDWGVPGDLFGA 177

Query: 502 MTGLQMYVI 528
           + G Q YV+
Sbjct: 178 LPGRQTYVL 186

>gb|AAQ67661.1| peroxiredoxin Q [Suaeda maritima subsp. salsa]
          Length = 214

 Score =  114 bits (284), Expect = 1e-24
 Identities = 53/108 (49%), Positives = 72/108 (66%)
 Frame = +1

Query: 205 LKTSEGKTISLSSYKGKQPIVLFFYPKAATPGCTKEACRFRDEYSRFTAAGAVVFGISSD 384
           LK  +GK +SLS +KGK P+V++FYP   TPGCTK+AC FRD Y +F  AGA V GIS D
Sbjct: 78  LKDQDGKNVSLSKFKGK-PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGD 136

Query: 385 SPADNAAFGKANNLPYPLVTDENSILRKHFGIKGDFLGLMTGLQMYVI 528
             + + AF +   LPY L++DE + +RK +G+  D  G + G Q YV+
Sbjct: 137 DSSSHKAFKQKYKLPYTLLSDEGNKVRKDWGVPSDLFGALPGRQTYVL 184

>dbj|BAA90524.1| peroxiredoxin Q [Sedum lineare]
          Length = 186

 Score =  114 bits (284), Expect = 1e-24
 Identities = 53/108 (49%), Positives = 72/108 (66%)
 Frame = +1

Query: 205 LKTSEGKTISLSSYKGKQPIVLFFYPKAATPGCTKEACRFRDEYSRFTAAGAVVFGISSD 384
           LK  EG+ +SLS +KGK P+V++FYP   TPGCTK+AC FRD Y +F  AGA V GIS D
Sbjct: 49  LKDQEGRPVSLSKFKGK-PVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVVGISGD 107

Query: 385 SPADNAAFGKANNLPYPLVTDENSILRKHFGIKGDFLGLMTGLQMYVI 528
           S   + AF K   LP+ L++DE + +RK +G+  D  G + G + YV+
Sbjct: 108 SSESHKAFAKKYKLPFTLLSDEGNKVRKEWGVPSDLFGTLPGRETYVL 155

>ref|NP_487223.1| bacterioferritin comigratory protein [Nostoc sp. PCC 7120]
           gi|25319021|pir||AH2203 bacterioferritin comigratory
           protein [imported] - Nostoc sp. (strain PCC 7120)
           gi|17132278|dbj|BAB74882.1| bacterioferritin comigratory
           protein [Nostoc sp. PCC 7120]
          Length = 153

 Score =  102 bits (254), Expect = 3e-21
 Identities = 52/124 (41%), Positives = 72/124 (57%)
 Frame = +1

Query: 157 LKVGEKLEDYPNYYKVLKTSEGKTISLSSYKGKQPIVLFFYPKAATPGCTKEACRFRDEY 336
           +KVG+   D+      L    G ++SLS ++GK+ +VL+FYPK  TPGCT E+C FRD Y
Sbjct: 3   VKVGDSAPDF-----TLPAQNGSSVSLSDFRGKKAVVLYFYPKDDTPGCTAESCAFRDRY 57

Query: 337 SRFTAAGAVVFGISSDSPADNAAFGKANNLPYPLVTDENSILRKHFGIKGDFLGLMTGLQ 516
             F  AGA + G+S DS   +  F    NLP+ L++D+   +RK +G    F GL  G  
Sbjct: 58  EVFQTAGAEIIGVSGDSNESHQKFASKYNLPFTLLSDKGDQVRKLYGATAAF-GLFPGRV 116

Query: 517 MYVI 528
            YVI
Sbjct: 117 TYVI 120

>gb|AAO53197.1| similar to Anabaena sp. (strain PCC 7120). Bacterioferritin
           comigratory protein [Dictyostelium discoideum]
          Length = 153

 Score =  102 bits (253), Expect = 4e-21
 Identities = 53/125 (42%), Positives = 76/125 (60%)
 Frame = +1

Query: 154 ELKVGEKLEDYPNYYKVLKTSEGKTISLSSYKGKQPIVLFFYPKAATPGCTKEACRFRDE 333
           +LKVG++  D+          +GK+ SL  +  K  +VL+FYPK +TPGCTKEAC FRD 
Sbjct: 3   KLKVGDQAPDF-----TASDKDGKSYSLKDFADKV-LVLYFYPKDSTPGCTKEACSFRDN 56

Query: 334 YSRFTAAGAVVFGISSDSPADNAAFGKANNLPYPLVTDENSILRKHFGIKGDFLGLMTGL 513
           Y +FT AGAVV G+SSD    ++ F     LP+ L+TD    + K +G+K + L L+ G 
Sbjct: 57  YEQFTEAGAVVVGVSSDDAESHSKFSAKYRLPFTLLTDNKGEMAKKYGVKKELL-LIPGR 115

Query: 514 QMYVI 528
             ++I
Sbjct: 116 STFII 120



EST assemble image


clone accession position
1 LCL089g07_r AV631167 1 454
2 MX255h11_r BP092560 40 529




Chlamydomonas reinhardtii
Kazusa DNA Research Institute