Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC006872A_C01 KCC006872A_c01
(604 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_085458.1| hypothetical protein [Frankia sp. CpI1] gi|1343... 37 0.28
ref|NP_793624.1| hypothetical protein [Pseudomonas syringae pv. ... 35 0.82
ref|XP_346959.1| hypothetical protein XP_346958 [Rattus norvegicus] 34 1.8
ref|NP_787974.1| CG33196-PB [Drosophila melanogaster] gi|2838026... 33 2.4
ref|NP_496223.1| putative protein (2K625) [Caenorhabditis elegan... 33 3.1
>ref|NP_085458.1| hypothetical protein [Frankia sp. CpI1] gi|13432073|gb|AAK20154.1|
hypothetical protein [Frankia sp. CpI1]
Length = 396
Score = 36.6 bits (83), Expect = 0.28
Identities = 25/71 (35%), Positives = 32/71 (44%)
Frame = -3
Query: 593 WSLSYGWTCPGRCRSRC*GAAPGSKSP*KCGPGCCEAALGCQT*PSPTASGYKACIRLCG 414
WS G P RC G A G++ PGC AA+ C+T PSP + + +C C
Sbjct: 21 WSACCGGRRPARCCGS--GGAVGAR------PGC--AAVSCRT-PSPPTTRWTSCGPRCV 69
Query: 413 NACYPMKHSGP 381
C P GP
Sbjct: 70 GCCGPALRPGP 80
>ref|NP_793624.1| hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|28854254|gb|AAO57319.1| hypothetical protein
PSPTO3852 [Pseudomonas syringae pv. tomato str. DC3000]
Length = 306
Score = 35.0 bits (79), Expect = 0.82
Identities = 26/91 (28%), Positives = 38/91 (41%)
Frame = +2
Query: 191 ATSTSCLACKMAALLLAALLGIGFLRADSQTLPDPQRMLTQPQNCTGWPEPRFWIEAQLW 370
A ST C + A + LL IGF D++ D + + NC G E
Sbjct: 145 AASTQCSSIGQAGRVTMGLLFIGFENPDAEASED-NKHFSMGFNCGGGETAMALWECMRS 203
Query: 371 WTDVGQNVSSDSRHFHIGGCMPYNQTLSGKV 463
+ ++G V +SR G MPY +T G +
Sbjct: 204 YMEIGPEVVPESR----VGAMPYEKTQIGSI 230
>ref|XP_346959.1| hypothetical protein XP_346958 [Rattus norvegicus]
Length = 140
Score = 33.9 bits (76), Expect = 1.8
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 15/115 (13%)
Frame = +2
Query: 59 VILVAPDHCIISWQLRRLAQT*SSS-----------PAFVSLGSTSLAKLCFLTLATSTS 205
V+ P HC +SW L L +T +S+ P ++ + S L+T S
Sbjct: 12 VLATVPYHCALSWHLMPLPRTANSAVSASGPSPLTMPPTITSTTASWTSSPAERLSTGKS 71
Query: 206 CLACKMAAL----LLAALLGIGFLRADSQTLPDPQRMLTQPQNCTGWPEPRFWIE 358
C+ A+L + + +G LR+ + P+RM + + W +P F+++
Sbjct: 72 MTLCRAASLARWSFVTPSIALGSLRSRQR----PRRMERKRKYPQWWNKPGFYVQ 122
>ref|NP_787974.1| CG33196-PB [Drosophila melanogaster]
gi|28380266|gb|AAN10358.2|AE003576_45 CG33196-PB
[Drosophila melanogaster]
Length = 23054
Score = 33.5 bits (75), Expect = 2.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 366 SCASIQKRGSGHPVQF*GCVSIRCGSGSVCESARRKPIPNSAAN 235
+C+ IQ G PV CV CG S+C+ + +P+ + AN
Sbjct: 9510 ACSPIQDPGRDIPVPKNPCVPSPCGPNSICQIKQNRPVCSCVAN 9553
>ref|NP_496223.1| putative protein (2K625) [Caenorhabditis elegans]
gi|7505941|pir||T23681 hypothetical protein M02G9.1 -
Caenorhabditis elegans gi|3878598|emb|CAB04625.1|
Hypothetical protein M02G9.1 [Caenorhabditis elegans]
Length = 1513
Score = 33.1 bits (74), Expect = 3.1
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 10/90 (11%)
Frame = -3
Query: 572 TCPGRCRSRC*GAAPGSKSP*KCGPGCCEA------ALGCQT*P---SPTASGYKA-CIR 423
TC RC +RC S+ P C P C A ++G T P +PT +A C
Sbjct: 269 TCQSRCENRCLSTCTASQ-PSVCAPSCSTACQLSCDSIGAATAPQSTNPTPVEVRALCTP 327
Query: 422 LCGNACYPMKHSGPHRSTTVAPQSRSGAQA 333
C C P + +TT P ++ A A
Sbjct: 328 TCMPQCLPSCTATTTTTTTQTPYIQTLAPA 357
