Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC005844A_C01 KCC005844A_c01
(484 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_862831.2| gag protein [Enzootic nasal tumour virus of goa... 34 0.80
dbj|BAC87595.1| unnamed protein product [Homo sapiens] 32 4.0
gb|AAK50634.1|AF355474_1 sox9 protein [Oryzias latipes] 32 4.0
gb|AAF82380.1|AF279135_1 spore coat structural protein SP65 [Dic... 32 4.0
ref|XP_330071.1| predicted protein [Neurospora crassa] gi|289273... 32 4.0
>ref|NP_862831.2| gag protein [Enzootic nasal tumour virus of goats]
gi|33348858|gb|AAO85304.2| gag protein [Enzootic nasal
tumour virus of goats]
Length = 612
Score = 34.3 bits (77), Expect = 0.80
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +3
Query: 306 YWLRX*ACVTCVLRXXQQAAGLAAKQHGPIHXPTPHPRXSAPPHPPTCQRLKP 464
+W C+ ++ L ++ P H P P P APP PP +L+P
Sbjct: 81 FWTLIRDCLDFDNDELKRLGNLLKQEEDPXHIPDPEPGYDAPPPPPPSLKLRP 133
>dbj|BAC87595.1| unnamed protein product [Homo sapiens]
Length = 124
Score = 32.0 bits (71), Expect = 4.0
Identities = 21/63 (33%), Positives = 29/63 (45%)
Frame = +3
Query: 201 P*PSCRR*SRNMEGPERGAHSAAPRQTXCGAXLACYWLRX*ACVTCVLRXXQQAAGLAAK 380
P S R +R P A + A R+T CG+ AC C +C R + AAG+A
Sbjct: 33 PSSSSERRARRCRAP---ATALARRRTFCGSSAAC-------CGSCTARIARSAAGMARL 82
Query: 381 QHG 389
+ G
Sbjct: 83 RFG 85
>gb|AAK50634.1|AF355474_1 sox9 protein [Oryzias latipes]
Length = 207
Score = 32.0 bits (71), Expect = 4.0
Identities = 15/36 (41%), Positives = 18/36 (49%)
Frame = +3
Query: 339 VLRXXQQAAGLAAKQHGPIHXPTPHPRXSAPPHPPT 446
+ + QQA AA G +H P H APP PPT
Sbjct: 33 IFKALQQADSPAASM-GEVHSPAEHSGSQAPPTPPT 67
>gb|AAF82380.1|AF279135_1 spore coat structural protein SP65 [Dictyostelium discoideum]
Length = 464
Score = 32.0 bits (71), Expect = 4.0
Identities = 25/81 (30%), Positives = 33/81 (39%), Gaps = 7/81 (8%)
Frame = +3
Query: 246 ERGAHSAAP-------RQTXCGAXLACYWLRX*ACVTCVLRXXQQAAGLAAKQHGPIHXP 404
ERG H + R T C C +R TC+ + G++ H P H P
Sbjct: 137 ERGPHCVSDTHYPNLCRVTKCSYDFTCKMVR--GNPTCL----RNHDGIST--HSPTHTP 188
Query: 405 TPHPRXSAPPHPPTCQRLKPW 467
T P S P H P+C L P+
Sbjct: 189 THSPTTS-PTHCPSCTELAPF 208
>ref|XP_330071.1| predicted protein [Neurospora crassa] gi|28927376|gb|EAA36329.1|
predicted protein [Neurospora crassa]
Length = 505
Score = 32.0 bits (71), Expect = 4.0
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 402 PTPHPRXSAPPHPPTCQRLKPWRKS 476
PTP P APP PP L+PW S
Sbjct: 267 PTPPPPTYAPPSPPVKSPLRPWSVS 291
