KCC005355A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC005355A_C01 KCC005355A_c01
ccactagcttaatgaagtcgtcgctggcgctgcatgcggtgccacgcccgcgctcggtcc
ggctgtcggctacgagcagcCGTGTGGACTCCCCGCAAGTTTCGGTAGTCCTTGTGCACT
CAGTGGGGCGATGAGGGAAAGGGCAAGCTGGTGGACAACCTCGCGCAGCAATTTGACATC
GTCGCGCGCGCCCAGTGTGGTGCCAACGCGGGGCACACCATTTACGATGAGACCGGTCGC
AAGTTCGCGCTGCACCTGGTTCCGTCGGGAATTCTGAACCCTAAGGCGATGTGCGTTATT
TGGCAATGGCGTTGTCCTGCACCTTCCGGGGCTGTTCGAGGAAATCCGCCGCCTCAAGGA
GAAGGGCGTGCAGGTGGACTGTGGCGGCTGCTGGTTTCGGAACGTGCACACCTGCTATTC
GACCTGCACAAGGAGATCGACGGGCTGCGCGAGGCGGAGCTGGCGGGCGACGGCAAGCAA
ATCGGTACCACCAAGCGCGGTATCGGGCCAGCGTACAGCTCGAAGGCGACGCGTAACGGG
TTGCGTGTGTGTGACCTGTTTGACCGCGCGACCTTCAAGACCAAGCTGACCAACCTGGCT
GCGGATGGCGCGAAGCGGTTTGGGGAAAAGTTTGCGTATGACGTCGAGGGCGATATCGCC
GCCTACGAGAAGCTGGCGGAGGAGATTC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC005355A_C01 KCC005355A_c01
         (688 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pdb|1DJ3|A Chain A, Structures Of Adenylosuccinate Synthetase Fr...   190  2e-47
sp|O24578|PURA_MAIZE Adenylosuccinate synthetase, chloroplast pr...   190  2e-47
gb|AAO38451.1| putative adenylosuccinate synthetase [Oryza sativ...   189  4e-47
sp|O24396|PURA_WHEAT Adenylosuccinate synthetase, chloroplast pr...   189  4e-47
gb|AAG01122.1|AF273333_7 BAC19.7 [Lycopersicon esculentum]            187  1e-46

>pdb|1DJ3|A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum
           Aestivum And Arabidopsis Thaliana gi|7546405|pdb|1DJ3|B
           Chain B, Structures Of Adenylosuccinate Synthetase From
           Triticum Aestivum And Arabidopsis Thaliana
          Length = 442

 Score =  190 bits (482), Expect = 2e-47
 Identities = 115/201 (57%), Positives = 136/201 (67%), Gaps = 9/201 (4%)
 Frame = +1

Query: 112 LCTQWGDEGKGKLVDNLAQQFDIVARAQCGANAGHTIYDETGRKFALHLVPSGILNPKAM 291
           L +QWGDEGKGKLVD LA +FDIVAR Q GANAGHTIY+  G+KFALHLVPSGIL+   +
Sbjct: 24  LGSQWGDEGKGKLVDVLAPRFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILHEGTL 83

Query: 292 CVIWQWRCPAPSGAVRGNPPPQGE---GRAGGL---WRLLVSERAHLLFDLHKEIDGLRE 453
           CV+        +GAV   P   GE    ++ G+    R+LVS+RAHLLFDLH+ +DGLRE
Sbjct: 84  CVV-------GNGAVIHVPGFFGEIDGLQSNGVSCDGRILVSDRAHLLFDLHQTVDGLRE 136

Query: 454 AELAGDGKQIGTTKRGIGPAYSSKATRNGLRVCDLFDRATFKTKLTNLAADGAKRFGEKF 633
           AELA     IGTTKRGIGP YSSK TRNGLRVCDL    TF  KL  L  D A RF E F
Sbjct: 137 AELA--NSFIGTTKRGIGPCYSSKVTRNGLRVCDLRHMDTFGDKLDVLFEDAAARF-EGF 193

Query: 634 AYD---VEGDIAAYEKLAEEI 687
            Y    ++ ++  Y+K AE +
Sbjct: 194 KYSKGMLKEEVERYKKFAERL 214

>sp|O24578|PURA_MAIZE Adenylosuccinate synthetase, chloroplast precursor (IMP--aspartate
           ligase) (AdSS) (AMPSase) gi|7438030|pir||T03984
           adenylosuccinate synthase (EC 6.3.4.4) - maize
           gi|1616661|gb|AAB16830.1| adenylosuccinate synthetase
          Length = 484

 Score =  190 bits (482), Expect = 2e-47
 Identities = 114/203 (56%), Positives = 135/203 (66%), Gaps = 11/203 (5%)
 Frame = +1

Query: 112 LCTQWGDEGKGKLVDNLAQQFDIVARAQCGANAGHTIYDETGRKFALHLVPSGILNPKAM 291
           L +QWGDEGKGKLVD LA +FDIVAR Q GANAGHTIY+  G+KFALHLVPSGIL+   +
Sbjct: 66  LGSQWGDEGKGKLVDVLAPRFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILHEGTL 125

Query: 292 CVIWQWRCPAPSGAVRGNPPPQGE--------GRAGGLWRLLVSERAHLLFDLHKEIDGL 447
           CV+        +GAV   P   GE         R GG  R+LVS+RAHLLFDLH+ +DGL
Sbjct: 126 CVV-------GNGAVIHVPGFFGEIDGLESNGVRCGG--RILVSDRAHLLFDLHQAVDGL 176

Query: 448 REAELAGDGKQIGTTKRGIGPAYSSKATRNGLRVCDLFDRATFKTKLTNLAADGAKRFGE 627
           REAEL  +   IGTTKRGIGP YSSK TRNGLRVCDL    TF  KL  L  D A RF +
Sbjct: 177 REAEL--ENSFIGTTKRGIGPCYSSKVTRNGLRVCDLRHMDTFGDKLDILFKDAASRF-Q 233

Query: 628 KFAYD---VEGDIAAYEKLAEEI 687
            F Y    ++ ++  Y+K A+ +
Sbjct: 234 GFQYSKSLLKEEVERYKKFADRL 256

>gb|AAO38451.1| putative adenylosuccinate synthetase [Oryza sativa (japonica
           cultivar-group)]
          Length = 489

 Score =  189 bits (479), Expect = 4e-47
 Identities = 109/195 (55%), Positives = 126/195 (63%), Gaps = 3/195 (1%)
 Frame = +1

Query: 112 LCTQWGDEGKGKLVDNLAQQFDIVARAQCGANAGHTIYDETGRKFALHLVPSGILNPKAM 291
           L TQWGDEGKGKLVD LAQ+FDIVAR Q GANAGHTIY+  G+KF+LHLVPSGILN K M
Sbjct: 71  LGTQWGDEGKGKLVDILAQRFDIVARCQGGANAGHTIYNSEGKKFSLHLVPSGILNEKTM 130

Query: 292 CVIWQWRCPAPSGAVRGNPPPQGEGRAGGLWRLLVSERAHLLFDLHKEIDGLREAELAGD 471
           CV+         G  +     +  G      R+LVS+RAHLLFD H+ +DGLRE EL   
Sbjct: 131 CVVGNGAVVHLPGFFKEIDGLESNG-ISCEGRILVSDRAHLLFDFHQTVDGLREVELG-- 187

Query: 472 GKQIGTTKRGIGPAYSSKATRNGLRVCDLFDRATFKTKLTNLAADGAKRFGEKFAYD--- 642
              IGTTKRGIGP YS+K  RNGLRV DL    TF  KL  L  D A RF E F Y    
Sbjct: 188 NSLIGTTKRGIGPCYSNKVIRNGLRVSDLRHMDTFGAKLNTLLRDAALRF-EGFEYSTKT 246

Query: 643 VEGDIAAYEKLAEEI 687
           ++ ++  YEK AE +
Sbjct: 247 LKEEVEKYEKFAERL 261

>sp|O24396|PURA_WHEAT Adenylosuccinate synthetase, chloroplast precursor (IMP--aspartate
           ligase) (AdSS) (AMPSase) gi|7438028|pir||T06792
           adenylosuccinate synthase (EC 6.3.4.4) - wheat
           (fragment) gi|1616659|gb|AAB16829.1| adenylosuccinate
           synthetase
          Length = 476

 Score =  189 bits (479), Expect = 4e-47
 Identities = 114/201 (56%), Positives = 136/201 (66%), Gaps = 9/201 (4%)
 Frame = +1

Query: 112 LCTQWGDEGKGKLVDNLAQQFDIVARAQCGANAGHTIYDETGRKFALHLVPSGILNPKAM 291
           L +QWGDEGKGKLVD LA +FDIVAR Q GANAGHTIY+  G+KFALHLVPSGIL+   +
Sbjct: 58  LGSQWGDEGKGKLVDVLAPRFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILHEGTL 117

Query: 292 CVIWQWRCPAPSGAVRGNPPPQGE---GRAGGL---WRLLVSERAHLLFDLHKEIDGLRE 453
           CV+        +GAV   P   GE    ++ G+    R+LVS+RAHLLFDLH+ +DGLRE
Sbjct: 118 CVV-------GNGAVIHVPGFFGEIDGLQSNGVSCDGRILVSDRAHLLFDLHQTVDGLRE 170

Query: 454 AELAGDGKQIGTTKRGIGPAYSSKATRNGLRVCDLFDRATFKTKLTNLAADGAKRFGEKF 633
           AELA     IGTTKRGIGP YSSK TRNGLRVCDL    TF  KL  L  D A RF E F
Sbjct: 171 AELA--NSFIGTTKRGIGPCYSSKVTRNGLRVCDLRHMDTFGDKLDVLFEDAAARF-EGF 227

Query: 634 AYD---VEGDIAAYEKLAEEI 687
            Y    ++ ++  Y++ AE +
Sbjct: 228 KYSKGMLKEEVERYKRFAERL 248

>gb|AAG01122.1|AF273333_7 BAC19.7 [Lycopersicon esculentum]
          Length = 581

 Score =  187 bits (476), Expect = 1e-46
 Identities = 110/191 (57%), Positives = 127/191 (65%), Gaps = 2/191 (1%)
 Frame = +1

Query: 121 QWGDEGKGKLVDNLAQQFDIVARAQCGANAGHTIYDETGRKFALHLVPSGILNPKAMCVI 300
           QWGDEGKGKLVD LA+ FDIVAR Q GANAGHTIY+  G+KFALHLVPSGILN + +CVI
Sbjct: 85  QWGDEGKGKLVDILAKHFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILNEETLCVI 144

Query: 301 WQWRCPAPSGAVRGNPPPQGEGRAGGLWRLLVSERAHLLFDLHKEIDGLREAELAGDGKQ 480
                    G  +     +  G      R+LVS+RAHLLFD H+EIDGLREAELA     
Sbjct: 145 GNGVVVHLPGLFKEIDGLEANG-VSCQGRILVSDRAHLLFDFHQEIDGLREAELA--KSF 201

Query: 481 IGTTKRGIGPAYSSKATRNGLRVCDLFDRATFKTKLTNLAADGAKRF-GEKFAYD-VEGD 654
           IGTTKRGIGP YSSK  RNGLRV DL    TF  KL  L +D A RF G K+  D +  +
Sbjct: 202 IGTTKRGIGPCYSSKVIRNGLRVSDLRHMDTFPQKLDLLLSDAAARFPGFKYGPDMLREE 261

Query: 655 IAAYEKLAEEI 687
           +  Y+K AE +
Sbjct: 262 VERYKKFAERL 272



EST assemble image


clone accession position
1 MX245a01_r BP091833 1 426
2 HC078b07_r AV637832 259 688




Chlamydomonas reinhardtii
Kazusa DNA Research Institute