KCC005212A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC005212A_C01 KCC005212A_c01
CGATAATCAAGCTGGTCAGCAACGTGCATGCTTAGAGCAAGGCTCCGGTTTCCGAGAAGG
TGGCCATGAGCGCGGACGACCTCGGTGGGGGCGGATTTTCATTTCCCTGTGCTGGATCAA
CCAGCTGAGGCGCCAAAGAAGATACCCCTCACCGCCTTCTCCACGGTCACGGACAGATCT
GGGTCAGCGGCGAAGTCTCCAGAAGCACCAGTACCCATCACAGACAAGCCGGCCCGATCG
AAGGTACCACTAGAAAAGGGCTACAGCCAGGTGGACTGGCTCAAGCTCTCGAAATCTGGC
GCAGACCTGAATGGACTTTCCGGCGGCTCCCTGCGGAGAGACATTACCTTAGAAGAGGTG
AAGAAGCACTCCACGCTGGAGGACGCGTGGATGGTGCTGCGTGGCAAGGTCTACAACATC
AGTCCCTACCTGCGCTTCCCCCCGGCGGCGTGCCCATCCTCAT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC005212A_C01 KCC005212A_c01
         (463 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB09523.1| gene_id:MTH16.10~unknown protein [Arabidopsis th...   100  1e-20
ref|NP_196530.1| cytochrome b5 domain-containing protein [Arabid...   100  1e-20
dbj|BAC55856.1| flavohemoprotein b5/b5R-like [Oryza sativa (japo...    89  2e-17
ref|NP_611419.1| CG11257-PA [Drosophila melanogaster] gi|7302484...    72  4e-12
gb|AAH25438.1| Ncb5or protein [Mus musculus]                           72  4e-12

>dbj|BAB09523.1| gene_id:MTH16.10~unknown protein [Arabidopsis thaliana]
          Length = 275

 Score = 99.8 bits (247), Expect = 1e-20
 Identities = 54/109 (49%), Positives = 71/109 (64%), Gaps = 5/109 (4%)
 Frame = +1

Query: 133 PKKIPLTAFS-TVTDRSGSAAKSPEAP----VPITDKPARSKVPLEKGYSQVDWLKLSKS 297
           PK+  + + S TVTD S S  +S E+      P      R+KVP EKGYSQ+DWLKL+++
Sbjct: 118 PKEETIGSLSFTVTDSSSSKKQSNESSETFKTPARKPITRTKVPFEKGYSQMDWLKLTRT 177

Query: 298 GADLNGLSGGSLRRDITLEEVKKHSTLEDAWMVLRGKVYNISPYLRFPP 444
             DL GL G S +R I ++EVKKH T +  W VL+G+VYNISPY+ F P
Sbjct: 178 HPDLAGLKGESNKRLIPMDEVKKHRTGDSMWTVLKGRVYNISPYMNFHP 226

>ref|NP_196530.1| cytochrome b5 domain-containing protein [Arabidopsis thaliana]
           gi|11357500|pir||T49930 hypothetical protein F17I14.130
           - Arabidopsis thaliana gi|7671421|emb|CAB89362.1|
           putative protein [Arabidopsis thaliana]
           gi|34146794|gb|AAQ62405.1| At5g09680 [Arabidopsis
           thaliana]
          Length = 211

 Score = 99.8 bits (247), Expect = 1e-20
 Identities = 54/109 (49%), Positives = 71/109 (64%), Gaps = 5/109 (4%)
 Frame = +1

Query: 133 PKKIPLTAFS-TVTDRSGSAAKSPEAP----VPITDKPARSKVPLEKGYSQVDWLKLSKS 297
           PK+  + + S TVTD S S  +S E+      P      R+KVP EKGYSQ+DWLKL+++
Sbjct: 54  PKEETIGSLSFTVTDSSSSKKQSNESSETFKTPARKPITRTKVPFEKGYSQMDWLKLTRT 113

Query: 298 GADLNGLSGGSLRRDITLEEVKKHSTLEDAWMVLRGKVYNISPYLRFPP 444
             DL GL G S +R I ++EVKKH T +  W VL+G+VYNISPY+ F P
Sbjct: 114 HPDLAGLKGESNKRLIPMDEVKKHRTGDSMWTVLKGRVYNISPYMNFHP 162

>dbj|BAC55856.1| flavohemoprotein b5/b5R-like [Oryza sativa (japonica
           cultivar-group)]
          Length = 216

 Score = 89.0 bits (219), Expect = 2e-17
 Identities = 45/94 (47%), Positives = 61/94 (64%)
 Frame = +1

Query: 163 TVTDRSGSAAKSPEAPVPITDKPARSKVPLEKGYSQVDWLKLSKSGADLNGLSGGSLRRD 342
           +V  R  + +     P       AR+KVP EKGYSQ+DWLKL+++  DL  L G   RR 
Sbjct: 82  SVLSRENTQSNLSSQPKSSKKPAARAKVPFEKGYSQMDWLKLTRTHPDL-ALKGQLNRRL 140

Query: 343 ITLEEVKKHSTLEDAWMVLRGKVYNISPYLRFPP 444
           I+LEEVK+H T +  W VL+G+VYNI+PY++F P
Sbjct: 141 ISLEEVKQHKTGDSIWTVLKGRVYNIAPYMKFHP 174

>ref|NP_611419.1| CG11257-PA [Drosophila melanogaster] gi|7302484|gb|AAF57568.1|
           CG11257-PA [Drosophila melanogaster]
          Length = 535

 Score = 71.6 bits (174), Expect = 4e-12
 Identities = 39/111 (35%), Positives = 64/111 (57%)
 Frame = +1

Query: 112 LDQPAEAPKKIPLTAFSTVTDRSGSAAKSPEAPVPITDKPARSKVPLEKGYSQVDWLKLS 291
           L  P  AP+K+     S  +  SGSA  +P           R+K  L+ GYS ++W++L 
Sbjct: 30  LQLPVTAPQKLN----SNGSSASGSATGNP-----------RNKCALKPGYSLMNWIRLC 74

Query: 292 KSGADLNGLSGGSLRRDITLEEVKKHSTLEDAWMVLRGKVYNISPYLRFPP 444
            SGADL+G  G  +   ++  E+ +H+ ++DAWM +RG+V+N++ Y+ F P
Sbjct: 75  NSGADLSGTGGRLV--PVSRTELARHNKIDDAWMAIRGRVFNVTRYMDFHP 123

>gb|AAH25438.1| Ncb5or protein [Mus musculus]
          Length = 502

 Score = 71.6 bits (174), Expect = 4e-12
 Identities = 30/58 (51%), Positives = 44/58 (75%)
 Frame = +1

Query: 271 VDWLKLSKSGADLNGLSGGSLRRDITLEEVKKHSTLEDAWMVLRGKVYNISPYLRFPP 444
           +DW++L+KSG DL GL GG +  ++T EE+KKH+  ED W+ +RG VYN+SPY+ + P
Sbjct: 1   MDWIRLTKSGKDLTGLKGGLI--EVTEEELKKHNKKEDCWICIRGFVYNVSPYMEYHP 56



EST assemble image


clone accession position
1 HC054a06_r AV636013 1 556
2 MX225h04_r BP090576 9 309




Chlamydomonas reinhardtii
Kazusa DNA Research Institute