KCC004192A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC004192A_C01 KCC004192A_c01
gcaccaggaggagctgggcCTCAGCTGCGCCTTCCCCAGCATGATGGGGACCAGCATGGT
GTACCTCGTGGAGTACGGCACGTGCCGCGCCGTGTTCACCTACGTGCAGGACTGCAAGCA
GCCCGGCCCCCAGCCTTTCCCCTTCTGCGTCTGCAACCGGCGCCCCAAGGCCACGCCCTT
TGCGCTGGACCCTACCATCCGCGTCAAGCCCGGCTCCTCGCCGCGCTCCACCAACTACTG
CTGGACCGCCACCACCGTCGCGCCTTATGACCCCACCTCGCCCTGCGGCAAGACCAATGA
GCTGTACAAGGCGGAGTTCTACGTGCGCAACAACACGCGCGGCGCCGTCACCGGCCTCAC
CGCCGCCGGCAAGTCCTGGTCGCCCGTGTGGGACAGCGATGGCAAGGTGTTCCGCCTGAC
CAACCTGATGTGGACCGTGGACTTCGTCAACACCAACCAGCCCCAGATCTGCGTCGAGCT
GACGGGCATCACGCTGGGCCAGTTCTGCGTGACTGCCAATTGCCCATACGCGTTGTTTGA
CGCGTCCAAGAGCTGTTGGCCCATGGGCCTGCTCGCTCGGGTAACGCGAGCACGCTCCGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC004192A_C01 KCC004192A_c01
         (600 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P81131|PER1_VOLCA PERPHORIN I PRECURSOR gi|282738|pir||S28267...    82  4e-15
gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays]            69  7e-11
ref|NP_821286.1| hypothetical protein [Streptomyces avermitilis ...    66  4e-10
ref|ZP_00056820.1| COG2115: Xylose isomerase [Thermobifida fusca]      64  1e-09
ref|NP_177036.1| protein kinase family [Arabidopsis thaliana] gi...    63  3e-09

>sp|P81131|PER1_VOLCA PERPHORIN I PRECURSOR gi|282738|pir||S28267 pherophorin I precursor
           - Volvox carteri gi|6006625|emb|CAB56808.1| Pherophorin
           I [Volvox carteri]
          Length = 512

 Score = 82.4 bits (202), Expect = 4e-15
 Identities = 63/172 (36%), Positives = 80/172 (45%), Gaps = 16/172 (9%)
 Frame = +2

Query: 98  TYVQDCKQPGPQPFPFCVCNRRPKATPFALDPTIRVKPGSSPRSTN---YCWTATTVAPY 268
           T    CK PG   FP C C  +P AT FA  PT+  +PG     TN   YC+T   VAP 
Sbjct: 337 TATTTCK-PGNPDFPKCECETKPAATRFAALPTLTQEPGRPSNRTNSTLYCFTLQVVAPL 395

Query: 269 DPTSPCGKTNELYKAEFYVRN--NTRGAVTGLT--AAGKS-----WSPVWDSDG-KVFRL 418
           +P   CG T  L KAE +  +    R  +  L   AAG S      SP W S G +  ++
Sbjct: 396 NPNGLCGNTTTLLKAELWGNDIPTQRRKILALAFKAAGASSPLRYLSPSWGSAGEQTLKV 455

Query: 419 TNLMWTVDFVNTNQPQICVELTGIT-LGQFCVTA--NCPYALFDASKSCWPM 565
           + L W  D    +  +IC+EL+  T L  FC T    C   LF   K C P+
Sbjct: 456 SGLNW--DASQADGAKICMELSNDTNLKTFCNTGQDTCWINLFSPDKQCCPL 505

 Score = 45.1 bits (105), Expect = 8e-04
 Identities = 43/167 (25%), Positives = 68/167 (39%), Gaps = 24/167 (14%)
 Frame = +2

Query: 137 FPFCVCNRRPKATPFALDPTIRVKPGSSPRSTNYCWTATTVAPY-DPTSPCGKTNELYKA 313
           FP+C C + P  +P++L+P ++     S R+  YC+T     P    T  C    ++ K 
Sbjct: 28  FPYCQCIKSP--SPYSLEPVVK-----SNRTGQYCFTLRVTKPSPSATGYCATKADIKKI 80

Query: 314 EFYVRN--NTRGAVTGLTAAG--KSWSPVWDS--DG----KVFRLTNLMWTVDFVNTNQP 463
           E  V    +  G V   T  G      P +D+  DG    ++ R T L   +D   ++  
Sbjct: 81  EINVNQVCDVFGNVVNATLNGVPTKVGPAFDTPPDGPNTSRILRFTQLNLGLD---SDGA 137

Query: 464 QICVELTGITLGQFCVT-------------ANCPYALFDASKSCWPM 565
            +C+ L     G+ C T               C  ALFD+   C P+
Sbjct: 138 MLCITLGQNDKGKGCTTLEDLCAPPAGAPKGTCSLALFDSKPDCCPI 184

 Score = 32.7 bits (73), Expect = 4.0
 Identities = 19/56 (33%), Positives = 25/56 (43%)
 Frame = +3

Query: 210 PAPRRAPPTTAGPPPPSRLMTPPRPAARPMSCTRRSSTCATTRAAPSPASPPPASP 377
           P  R +PP    PPPP     PP P A P++   ++   AT  A P    P   +P
Sbjct: 183 PISRVSPPAPPPPPPPP----PPEPVAVPITPPCKTCVYATITALPPLLFPFQLTP 234

>gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays]
          Length = 274

 Score = 68.6 bits (166), Expect = 7e-11
 Identities = 61/194 (31%), Positives = 86/194 (43%), Gaps = 9/194 (4%)
 Frame = +3

Query: 12  SWASAAPSPA*WGPAWCTSWSTARAAPCSPTC---RTASSPAPSLSPSASATGAPRPRP- 179
           S A+  P+ A    A  TS  T+ A+     C      S P+P  S + S+T AP  RP 
Sbjct: 19  STAAGTPTSACSPTATSTSTRTSSASTAPTACPGTSRGSRPSPCSSTATSSTSAPGRRPR 78

Query: 180 -----LRWTLPSASSPAPRRAPPTTAGPPPPSRLMTPPRPAARPMSCTRRSSTCATTRAA 344
                  W+ P  +SP      PT  G P P R    P P ARP +C+ RS+  A + + 
Sbjct: 79  GTTTSTAWSSPWTASPCASCREPTPRGRPAPCRRCPSPAP-ARPTACSSRST--AGSPSG 135

Query: 345 PSPASPPPASPGRPCGTAMARCSA*PT*CGPWTSSTPTSPRSASS*RASRWASSA*LPIA 524
           P+P      SPG   GTA    +A  T    W SS+  SP + ++     W++    P  
Sbjct: 136 PTPCPSQRRSPG-CTGTASRPTTASRT--LTWPSSSARSPPTCTA-----WSARRTAPTT 187

Query: 525 HTRCLTRPRAVGPW 566
            T  ++RP+   PW
Sbjct: 188 STGSMSRPQC-PPW 200

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 54/177 (30%), Positives = 73/177 (40%), Gaps = 15/177 (8%)
 Frame = +3

Query: 54  AWCTSWSTARAAPC-SPT-------CRTASSPAP------SLSPSASATGAPRPRPLRWT 191
           AW + W+ +  A C  PT       CR   SPAP      S   +A +   P P P +  
Sbjct: 85  AWSSPWTASPCASCREPTPRGRPAPCRRCPSPAPARPTACSSRSTAGSPSGPTPCPSQRR 144

Query: 192 LPSASSPAPRRAPPTTAGPPPPSRLMTPPRPAAR-PMSCTRRSSTCATTRAAPSPASPPP 368
            P  +  A R   PTTA     SR +T P  +AR P +CT  S+     R AP+ ++   
Sbjct: 145 SPGCTGTASR---PTTA-----SRTLTWPSSSARSPPTCTAWSA----RRTAPTTSTGSM 192

Query: 369 ASPGRPCGTAMARCSA*PT*CGPWTSSTPTSPRSASS*RASRWASSA*LPIAHTRCL 539
           + P                 C PW   T T+PR ASS   + W  +  L +A T  L
Sbjct: 193 SRPQ----------------CPPW-EGTATTPRPASSPLTAPWRVTRRLAVAVTTAL 232

 Score = 48.5 bits (114), Expect = 7e-05
 Identities = 52/175 (29%), Positives = 74/175 (41%), Gaps = 8/175 (4%)
 Frame = +3

Query: 48  GPAWCTSWSTARAAPCSPTCRTASSPAPSLSPSASATGAPRPRPLRWTLPSASSPAPRRA 227
           G A   + S A A P + T   A +P  + SP+A++T          T  S++S AP   
Sbjct: 2   GRAATRASSAATATPSTSTA--AGTPTSACSPTATSTS---------TRTSSASTAPTAC 50

Query: 228 PPTTAG--PPPPSRLMTPPR--PAARPMSCTRRSSTCATTRAAPSPASPPPASPGR--PC 389
           P T+ G  P P S   T     P  RP   T  ++  +   A+P  +   P   GR  PC
Sbjct: 51  PGTSRGSRPSPCSSTATSSTSAPGRRPRGTTTSTAWSSPWTASPCASCREPTPRGRPAPC 110

Query: 390 GTAMARCSA*PT*CGP-WTSSTPTSPRSASS*RASRWAS-SA*LPIAHTRCLTRP 548
               +   A PT C    T+ +P+ P    S R S   + +A  P   +R LT P
Sbjct: 111 RRCPSPAPARPTACSSRSTAGSPSGPTPCPSQRRSPGCTGTASRPTTASRTLTWP 165

 Score = 35.4 bits (80), Expect = 0.62
 Identities = 25/80 (31%), Positives = 32/80 (39%), Gaps = 17/80 (21%)
 Frame = +3

Query: 30  PSPA*WGPAWCTSWSTARAAP-----------CSPTCRTASSPAPSLSPSASATGAPR-- 170
           PS +   P  CT+WS  R AP           C P   TA++P P+ SP  +     R  
Sbjct: 165 PSSSARSPPTCTAWSARRTAPTTSTGSMSRPQCPPWEGTATTPRPASSPLTAPWRVTRRL 224

Query: 171 ----PRPLRWTLPSASSPAP 218
                  L W   S +SP P
Sbjct: 225 AVAVTTALLWCQRSLASPVP 244

>ref|NP_821286.1| hypothetical protein [Streptomyces avermitilis MA-4680]
            gi|29603748|dbj|BAC67821.1| hypothetical protein
            [Streptomyces avermitilis MA-4680]
          Length = 844

 Score = 65.9 bits (159), Expect = 4e-10
 Identities = 49/142 (34%), Positives = 64/142 (44%), Gaps = 13/142 (9%)
 Frame = +3

Query: 3    TRRSWASAAPSPA*WGPAWCTSWSTARAAPCSPTCRTASSPAPSLSPSASATGAPRPRPL 182
            T+ S   + PSPA   P   T  +T  + PCSPT  T +SP+ S +P+ S    P   P 
Sbjct: 661  TKASTKCSTPSPA--PPTTSTPSATESSPPCSPTAPTTTSPSSSPAPAPST---PTKSP- 714

Query: 183  RWTLPSASSPAPRRAPPTTAGPPPPSRLMTPPRPAARPMS------------CTRRSSTC 326
                PS S P P  +P     PPP S   T P P + P S             T  S++ 
Sbjct: 715  ----PSTSPPTPPSSPKHANTPPPNSPPGTSPTPPSPPNSSSANSSPTPSATATHPSNSA 770

Query: 327  ATTRAAPS-PASPPPASPGRPC 389
            ++T   PS P SP PA+P   C
Sbjct: 771  SSTTTTPSPPKSPTPATPPPTC 792

 Score = 45.4 bits (106), Expect = 6e-04
 Identities = 38/127 (29%), Positives = 58/127 (44%), Gaps = 4/127 (3%)
 Frame = +3

Query: 123 PAPSLSPSASATGAPRPRPLRWTLPSASSPAPRRAPPTTAGPPPPSRLMTPPRPAARPMS 302
           P  + SPS + T + +P     T  S     P  APPTT+ P            ++ P S
Sbjct: 640 PEAASSPS-TPTDSSKPATTTSTKASTKCSTPSPAPPTTSTPSATE--------SSPPCS 690

Query: 303 CTRRSSTCATTRAAPSPASP----PPASPGRPCGTAMARCSA*PT*CGPWTSSTPTSPRS 470
            T  ++T  ++  AP+P++P    P  SP  P  ++    +  P    P TS TP SP +
Sbjct: 691 PTAPTTTSPSSSPAPAPSTPTKSPPSTSPPTP-PSSPKHANTPPPNSPPGTSPTPPSPPN 749

Query: 471 ASS*RAS 491
           +SS  +S
Sbjct: 750 SSSANSS 756

 Score = 33.1 bits (74), Expect = 3.1
 Identities = 24/91 (26%), Positives = 37/91 (40%)
 Frame = +3

Query: 12   SWASAAPSPA*WGPAWCTSWSTARAAPCSPTCRTASSPAPSLSPSASATGAPRPRPLRWT 191
            S A+++P+P+        S S+    P  P   T ++P P+ +       AP P      
Sbjct: 751  SSANSSPTPSATATHPSNSASSTTTTPSPPKSPTPATPPPTCA-------APAPTTKEDA 803

Query: 192  LPSASSPAPRRAPPTTAGPPPPSRLMTPPRP 284
              S+S+ +P    P T  P  PS    P  P
Sbjct: 804  ASSSSANSPNAGAPATPPPAKPSGPNKPSPP 834

>ref|ZP_00056820.1| COG2115: Xylose isomerase [Thermobifida fusca]
          Length = 754

 Score = 64.3 bits (155), Expect = 1e-09
 Identities = 60/177 (33%), Positives = 74/177 (40%), Gaps = 24/177 (13%)
 Frame = +3

Query: 21  SAAPSPA*WGPAWCTSWSTARAAPCSPTCRTASSPA-----PSLSPSASATGAPRPRPLR 185
           S+AP+PA       T+W     +P +P   T+SSP+     PS SP       P P P  
Sbjct: 115 SSAPAPA-------TTWPPH--SPSTPDPATSSSPSAPPEPPSPSPKNPPPTPPAPSPDS 165

Query: 186 WTLPSASSPAPRRAPPTTAGPPPPSRLMTP------------PRPAAR---PMSCTRRSS 320
            T P ASSP+   +    + PP P R  +P            P PAA    P S      
Sbjct: 166 PTPPDASSPSSAPSTQPASSPPEPLRSASPSKNSTNSPSPHPPAPAASSSCPTSTANAPP 225

Query: 321 TCATTRAA----PSPASPPPASPGRPCGTAMARCSA*PT*CGPWTSSTPTSPRSASS 479
           TC T  AA    P P SPPP  P  P   A +  S  P+      SST  SP + SS
Sbjct: 226 TCPTPPAASTASPEPTSPPPTWPA-PSSKACSAASLTPS----TPSSTKVSPSTVSS 277

 Score = 59.3 bits (142), Expect = 4e-08
 Identities = 53/172 (30%), Positives = 75/172 (42%), Gaps = 18/172 (10%)
 Frame = +3

Query: 18  ASAAPSPA*WGPAWCTSWSTARAAPCS---PTCRTASSPAPSLSPSASATGAPRPRPLRW 188
           A+  P P   GP    S S A +AP     P   +A+SP P+  PS S+  AP      W
Sbjct: 68  ATTTPPPTPTGPTCSPSPSAANSAPRESPPPPKSSAASPPPNSPPSTSSAPAPATT---W 124

Query: 189 TLPSASSPAPRRAPPTTAGPPPPS---RLMTPPRPAARPMSCTRRSSTCATTRAAPSPAS 359
              S S+P P  +   +A P PPS   +   P  PA  P S T   ++  ++  +  PAS
Sbjct: 125 PPHSPSTPDPATSSSPSAPPEPPSPSPKNPPPTPPAPSPDSPTPPDASSPSSAPSTQPAS 184

Query: 360 PPP-----ASPGR-------PCGTAMARCSA*PT*CGPWTSSTPTSPRSASS 479
            PP     ASP +       P   A A  S+ PT       + PT P ++++
Sbjct: 185 SPPEPLRSASPSKNSTNSPSPHPPAPAASSSCPTSTANAPPTCPTPPAASTA 236

 Score = 58.9 bits (141), Expect = 5e-08
 Identities = 43/137 (31%), Positives = 59/137 (42%), Gaps = 14/137 (10%)
 Frame = +3

Query: 111 TASSPAPSLSPSASATGAPRPRPLRWTLPSASS----------PAPRRAPPTTAGPPPPS 260
           +A SP+P+ SPS ++ G+P   P     P ASS          P P    PT A PP P+
Sbjct: 10  SAQSPSPA-SPSPNSAGSPNTNPTTPPEPKASSCPTTGSPNALPKPPNPSPTAATPPAPA 68

Query: 261 RLMTPPRPAARPMSCTRRSSTCATTRAAPSP----ASPPPASPGRPCGTAMARCSA*PT* 428
               PP P     S +  ++  A   + P P    ASPPP SP           S+ P  
Sbjct: 69  TTTPPPTPTGPTCSPSPSAANSAPRESPPPPKSSAASPPPNSP--------PSTSSAPAP 120

Query: 429 CGPWTSSTPTSPRSASS 479
              W   +P++P  A+S
Sbjct: 121 ATTWPPHSPSTPDPATS 137

 Score = 57.4 bits (137), Expect = 2e-07
 Identities = 47/151 (31%), Positives = 71/151 (46%), Gaps = 20/151 (13%)
 Frame = +3

Query: 72  STARAAPCSPTCRTASSPAPSLSPSASATGAPRPRPLRWTLPSASSPAPR---RAPPT-- 236
           S+  +AP +    +   P  S SPS ++T +P P P     P+ASS  P     APPT  
Sbjct: 172 SSPSSAPSTQPASSPPEPLRSASPSKNSTNSPSPHP---PAPAASSSCPTSTANAPPTCP 228

Query: 237 ------TAGPPPPSRLMTPPRPAARPMSCTRRS-STCATTRAAPSPAS--------PPPA 371
                 TA P P S   T P P+++  S    + ST ++T+ +PS  S        PP +
Sbjct: 229 TPPAASTASPEPTSPPPTWPAPSSKACSAASLTPSTPSSTKVSPSTVSSSSAAAPAPPQS 288

Query: 372 SPGRPCGTAMARCSA*PT*CGPWTSSTPTSP 464
           +P  P      + SA P+   P  +++PT+P
Sbjct: 289 APSPP------KSSAAPSPSQPKANTSPTAP 313

 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 39/123 (31%), Positives = 53/123 (42%), Gaps = 4/123 (3%)
 Frame = +3

Query: 21  SAAPSPA*WGPAWCT----SWSTARAAPCSPTCRTASSPAPSLSPSASATGAPRPRPLRW 188
           +A P P    P   T    + +T    P  PTC    SP+PS + SA     P P+    
Sbjct: 49  NALPKPPNPSPTAATPPAPATTTPPPTPTGPTC----SPSPSAANSAPRESPPPPK---- 100

Query: 189 TLPSASSPAPRRAPPTTAGPPPPSRLMTPPRPAARPMSCTRRSSTCATTRAAPSPASPPP 368
              SA+SP P   P T++ P P +    PP   + P   T  S +      +PSP +PPP
Sbjct: 101 --SSAASPPPNSPPSTSSAPAPAT--TWPPHSPSTPDPATSSSPSAPPEPPSPSPKNPPP 156

Query: 369 ASP 377
             P
Sbjct: 157 TPP 159

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
 Frame = +3

Query: 72  STARAAPCSPTCRTASSPA--PSLSPSASA-----TGAPR--PRPLRWTLPSASSPAPRR 224
           S    +P SP+  +A SP   P+  P   A     TG+P   P+P   +  +A+ PAP  
Sbjct: 10  SAQSPSPASPSPNSAGSPNTNPTTPPEPKASSCPTTGSPNALPKPPNPSPTAATPPAPAT 69

Query: 225 A--PPTTAGP---PPPSRLMTPPRPAARPMSCTRRS---STCATTRAAPSPASP-PPASP 377
              PPT  GP   P PS   + PR +  P   +  S   ++  +T +AP+PA+  PP SP
Sbjct: 70  TTPPPTPTGPTCSPSPSAANSAPRESPPPPKSSAASPPPNSPPSTSSAPAPATTWPPHSP 129

Query: 378 GRPCGTAMARCSA*PT*CGPWTSSTPTSPRSAS 476
             P     +  SA P    P   + P +P + S
Sbjct: 130 STPDPATSSSPSAPPEPPSPSPKNPPPTPPAPS 162

 Score = 52.0 bits (123), Expect = 6e-06
 Identities = 47/145 (32%), Positives = 63/145 (43%), Gaps = 9/145 (6%)
 Frame = +3

Query: 63  TSWSTARAAPCSPTCRTASSPAPSLSPSASATGAPRPRPLRWTL---PSASSPAPRRAPP 233
           T    A   P +P+   A+ PAP       AT  P P P   T    PSA++ APR +PP
Sbjct: 45  TGSPNALPKPPNPSPTAATPPAP-------ATTTPPPTPTGPTCSPSPSAANSAPRESPP 97

Query: 234 ----TTAGPPP--PSRLMTPPRPAARPMSCTRRSSTCATTRAAPSPASPPPASPGRPCGT 395
               + A PPP  P    + P PA      +  +   AT+ +  +P  PP  SP  P  T
Sbjct: 98  PPKSSAASPPPNSPPSTSSAPAPATTWPPHSPSTPDPATSSSPSAPPEPPSPSPKNPPPT 157

Query: 396 AMARCSA*PT*CGPWTSSTPTSPRS 470
             A     PT   P  +S+P+S  S
Sbjct: 158 PPAPSPDSPT---PPDASSPSSAPS 179

 Score = 52.0 bits (123), Expect = 6e-06
 Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 1/147 (0%)
 Frame = +3

Query: 18  ASAAPSPA*WGPAWCTSWSTARAAPCSPTCRTASSPAPSLSPSASATGAPRPRPLRWTLP 197
           +S+ P+     P  C +   A  A   PT    + PAPS    ++A+  P       + P
Sbjct: 213 SSSCPTSTANAPPTCPTPPAASTASPEPTSPPPTWPAPSSKACSAASLTP-------STP 265

Query: 198 SASSPAPRR-APPTTAGPPPPSRLMTPPRPAARPMSCTRRSSTCATTRAAPSPASPPPAS 374
           S++  +P   +  + A P PP    +PP+ +A P     +++T  T   A  P    PA+
Sbjct: 266 SSTKVSPSTVSSSSAAAPAPPQSAPSPPKSSAAPSPSQPKANTSPTAPPAKQPGH-SPAN 324

Query: 375 PGRPCGTAMARCSA*PT*CGPWTSSTP 455
           P  P G      SA PT    + ++TP
Sbjct: 325 PPHPNGKTPEPSSAKPTPPRRYANATP 351

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
 Frame = +3

Query: 195 PSASSPAPRRAPPTTAGPPPPSRLMTPPRPAARPMSCTRRSSTCATT---RAAPSPASPP 365
           PSA SP+P    P +AG P  +   TPP P A         S+C TT    A P P +P 
Sbjct: 9   PSAQSPSPASPSPNSAGSPNTNPT-TPPEPKA---------SSCPTTGSPNALPKPPNPS 58

Query: 366 PASPGRPCGTAMARCSA*PT*CGPWTSSTPTSPRSA 473
           P +   P   A A  +  PT  GP  S +P++  SA
Sbjct: 59  PTAATPP---APATTTPPPTPTGPTCSPSPSAANSA 91

 Score = 36.6 bits (83), Expect = 0.28
 Identities = 29/100 (29%), Positives = 38/100 (38%)
 Frame = +3

Query: 3   TRRSWASAAPSPA*WGPAWCTSWSTARAAPCSPTCRTASSPAPSLSPSASATGAPRPRPL 182
           T  S ++AAP+P    P+     S+A  +P  P   T+ +  P+  P  S    P P   
Sbjct: 274 TVSSSSAAAPAPPQSAPS--PPKSSAAPSPSQPKANTSPTAPPAKQPGHSPANPPHPNGK 331

Query: 183 RWTLPSASSPAPRRAPPTTAGPPPPSRLMTPPRPAARPMS 302
                SA    PRR    T  P   S   T P      MS
Sbjct: 332 TPEPSSAKPTPPRRYANATPKPETDSNRKTKPTTKEAHMS 371

>ref|NP_177036.1| protein kinase family [Arabidopsis thaliana]
           gi|25404764|pir||D96711 hypothetical protein F24J5.8
           [imported] - Arabidopsis thaliana
           gi|5734709|gb|AAD49974.1|AC008075_7 Contains PF|00069
           Eukaryotic protein kinase domain. [Arabidopsis thaliana]
           gi|14334806|gb|AAK59581.1| putative protein kinase
           [Arabidopsis thaliana] gi|21280865|gb|AAM44925.1|
           putative protein kinase [Arabidopsis thaliana]
          Length = 708

 Score = 63.2 bits (152), Expect = 3e-09
 Identities = 46/143 (32%), Positives = 62/143 (43%), Gaps = 8/143 (5%)
 Frame = +3

Query: 90  PCSPTCRTASSPAPS-LSPSASATGAPRPRPLRWTLPSASSPAPRRAPPTTAGPPPPSRL 266
           P  P    +SSP P  + PS   + +P P+P+  + P ++SP P   PP  + PPPP+  
Sbjct: 70  PPLPKPPESSSPPPQPVIPSPPPSTSPPPQPVIPSPPPSASPPPALVPPLPSSPPPPAS- 128

Query: 267 MTPPRPAARPMSCTRRSSTCATTRAAPSP-------ASPPPASPGRPCGTAMARCSA*PT 425
           + PPRP+  P    R          +P P        SPPP SP  P      +    P 
Sbjct: 129 VPPPRPSPSPPILVRSPPPSVRPIQSPPPPPSDRPTQSPPPPSPPSPPSERPTQSPPSPP 188

Query: 426 *CGPWTSSTPTSPRSASS*RASR 494
              P  S  P SP S  S R S+
Sbjct: 189 SERPTQSPPPPSPPSPPSDRPSQ 211

 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 40/137 (29%), Positives = 52/137 (37%), Gaps = 5/137 (3%)
 Frame = +3

Query: 96  SPTCRTASSPAPSLSPSASATGAPRPRPLRWTLPSASSPAPRRAPPTTAGPPPPSRLMTP 275
           +P     S+  P  SP      A  P     T P  +SP P  APP    PPPP  + T 
Sbjct: 4   TPVQPPVSNSPPVTSPPPPLNNATSPA----TPPPVTSPLPPSAPPPNRAPPPPPPVTTS 59

Query: 276 PRPAAR-----PMSCTRRSSTCATTRAAPSPASPPPASPGRPCGTAMARCSA*PT*CGPW 440
           P P A      P+     SS+       PSP  P  + P +P   +    ++ P    P 
Sbjct: 60  PPPVANGAPPPPLPKPPESSSPPPQPVIPSP-PPSTSPPPQPVIPSPPPSASPPPALVPP 118

Query: 441 TSSTPTSPRSASS*RAS 491
             S+P  P S    R S
Sbjct: 119 LPSSPPPPASVPPPRPS 135

 Score = 46.6 bits (109), Expect = 3e-04
 Identities = 44/135 (32%), Positives = 55/135 (40%), Gaps = 14/135 (10%)
 Frame = +3

Query: 21  SAAPSPA*WGPAWCTSWSTARAAPCSPTCRT---ASSPAPSLSPSASATGAPRPRPLRWT 191
           SA+P PA   P   +    A   P  P+        SP PS+ P  S    P  RP + +
Sbjct: 108 SASPPPALVPPLPSSPPPPASVPPPRPSPSPPILVRSPPPSVRPIQSPPPPPSDRPTQ-S 166

Query: 192 LPSASSPAPRRAPPTTAGPPPPSRLMT----PPRPAARPMSCTRRSSTCATTRAAP---- 347
            P  S P+P    PT + P PPS   T    PP P + P     +S         P    
Sbjct: 167 PPPPSPPSPPSERPTQSPPSPPSERPTQSPPPPSPPSPPSDRPSQSPPPPPEDTKPQPPR 226

Query: 348 -SPASPPP--ASPGR 383
            SP SPPP  +SP R
Sbjct: 227 RSPNSPPPTFSSPPR 241

 Score = 40.8 bits (94), Expect = 0.015
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
 Frame = +3

Query: 81  RAAPCSPTCRTASSPAPSLSPSASATGAPRPRPLRWTLPSASSPAPRRAPPTTAGPPPPS 260
           ++ P  P+ R   SP P   PS      P  RP + + PS  S  P ++PP  + P PPS
Sbjct: 153 QSPPPPPSDRPTQSPPPPSPPSP-----PSERPTQ-SPPSPPSERPTQSPPPPSPPSPPS 206

Query: 261 ----RLMTPPRPAARPMSCTRRSSTCATTRAAPSPASPP 365
               +   PP    +P    R  ++   T ++P P SPP
Sbjct: 207 DRPSQSPPPPPEDTKPQPPRRSPNSPPPTFSSP-PRSPP 244

 Score = 40.0 bits (92), Expect = 0.025
 Identities = 40/126 (31%), Positives = 52/126 (40%), Gaps = 24/126 (19%)
 Frame = +3

Query: 117 SSPAPSLSPSASATGAPRPRPLRWTLPSASSPAPRRAPP-----TTAGPP-----PPSRL 266
           +SP P L+   +AT    P P+   LP  S+P P RAPP     TT+ PP     PP  L
Sbjct: 17  TSPPPPLN---NATSPATPPPVTSPLPP-SAPPPNRAPPPPPPVTTSPPPVANGAPPPPL 72

Query: 267 MTPPRPAARPMSCTRRSSTCATT--------RAAPSPASPP------PASPGRPCGTAMA 404
             PP  ++ P      S   +T+           PS + PP      P+SP  P      
Sbjct: 73  PKPPESSSPPPQPVIPSPPPSTSPPPQPVIPSPPPSASPPPALVPPLPSSPPPPASVPPP 132

Query: 405 RCSA*P 422
           R S  P
Sbjct: 133 RPSPSP 138



EST assemble image


clone accession position
1 CM021f06_r AV387903 1 600
2 MX228c01_r BP090729 20 315




Chlamydomonas reinhardtii
Kazusa DNA Research Institute