Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003473A_C01 KCC003473A_c01
(706 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_700440.1| WD repeat membrane protein PWDMP [Mus musculus]... 158 7e-38
dbj|BAC34929.1| unnamed protein product [Mus musculus] 158 7e-38
ref|XP_223412.2| similar to WD repeat membrane protein [Rattus n... 158 9e-38
ref|NP_079408.2| WD repeat membrane protein PWDMP [Homo sapiens]... 154 1e-36
dbj|BAC98223.1| mKIAA1638 protein [Mus musculus] 150 2e-35
>ref|NP_700440.1| WD repeat membrane protein PWDMP [Mus musculus]
gi|22651381|gb|AAK38746.1| WD repeat membrane protein
[Mus musculus]
Length = 1282
Score = 158 bits (400), Expect = 7e-38
Identities = 92/235 (39%), Positives = 134/235 (56%), Gaps = 2/235 (0%)
Frame = +3
Query: 6 DGQVLTVGTHNGYMHSFLASLPMVYDFHGTRVLYLTSLLEMTLLDVSRRQTVARIELENE 185
DGQ+L + T G +H FL LP++ D TR+ YLTSLLE+T+ ++ + + ++ E
Sbjct: 271 DGQLLALSTQRGSLHVFLTKLPILGDACHTRIAYLTSLLEVTVANLIEGEPPITVSVDVE 330
Query: 186 PAFCGLGPSHAAVGMNNQAAFYSLGEKVGKVVQRREYLGTITAIKLNETQAAVLTGGHVV 365
P F +G H AVGMNN+A FY LGE V K ++ EYLGT+ +I L+ AA L G +
Sbjct: 331 PTFVAVGLYHLAVGMNNRAWFYVLGENVVKKLKDVEYLGTVASICLHSDYAAALFEGKIQ 390
Query: 366 VHPISVEAGHAPDELDV-VIPGPGQPANITCVALTPTFVITGSRTGTLSYYLSPDVTPVN 542
+H I E A +E + + P I C ALT F+I G+ TG + Y+ D VN
Sbjct: 391 LHLIENEMLDAQEERETRLFPAVDDKCRILCHALTSDFLIYGTDTGIIHYFFIEDWQFVN 450
Query: 543 EFRHDDGGIVRLFPQATGARLVFEDDKGALHLFNPVNDHVVAVP-YTGRAETVMW 704
++RH G+ +LFP G RLVF D+K ++ PVND +P ++ + V+W
Sbjct: 451 DYRH-PVGVKKLFPDPNGTRLVFIDEKSDGFVYCPVNDATYEIPDFSPTIKGVLW 504
>dbj|BAC34929.1| unnamed protein product [Mus musculus]
Length = 1021
Score = 158 bits (400), Expect = 7e-38
Identities = 92/235 (39%), Positives = 134/235 (56%), Gaps = 2/235 (0%)
Frame = +3
Query: 6 DGQVLTVGTHNGYMHSFLASLPMVYDFHGTRVLYLTSLLEMTLLDVSRRQTVARIELENE 185
DGQ+L + T G +H FL LP++ D TR+ YLTSLLE+T+ ++ + + ++ E
Sbjct: 330 DGQLLALSTQRGSLHVFLTKLPILGDACHTRIAYLTSLLEVTVANLIEGEPPITVSVDVE 389
Query: 186 PAFCGLGPSHAAVGMNNQAAFYSLGEKVGKVVQRREYLGTITAIKLNETQAAVLTGGHVV 365
P F +G H AVGMNN+A FY LGE V K ++ EYLGT+ +I L+ AA L G +
Sbjct: 390 PTFVAVGLYHLAVGMNNRAWFYVLGENVVKKLKDVEYLGTVASICLHSDYAAALFEGKIQ 449
Query: 366 VHPISVEAGHAPDELDV-VIPGPGQPANITCVALTPTFVITGSRTGTLSYYLSPDVTPVN 542
+H I E A +E + + P I C ALT F+I G+ TG + Y+ D VN
Sbjct: 450 LHLIENEMLDAQEERETRLFPAVDDKCRILCHALTSDFLIYGTDTGIIHYFFIEDWQFVN 509
Query: 543 EFRHDDGGIVRLFPQATGARLVFEDDKGALHLFNPVNDHVVAVP-YTGRAETVMW 704
++RH G+ +LFP G RLVF D+K ++ PVND +P ++ + V+W
Sbjct: 510 DYRH-PVGVKKLFPDPNGTRLVFIDEKSDGFVYCPVNDATYEIPDFSPTIKGVLW 563
>ref|XP_223412.2| similar to WD repeat membrane protein [Rattus norvegicus]
Length = 1310
Score = 158 bits (399), Expect = 9e-38
Identities = 92/235 (39%), Positives = 134/235 (56%), Gaps = 2/235 (0%)
Frame = +3
Query: 6 DGQVLTVGTHNGYMHSFLASLPMVYDFHGTRVLYLTSLLEMTLLDVSRRQTVARIELENE 185
DGQ+L + T G +H FL LP++ D TR+ YLTSLLE+T+ ++ + + ++ E
Sbjct: 286 DGQLLALSTQRGSLHVFLTKLPILGDACHTRIAYLTSLLEVTVANLIEGEPPITVSVDVE 345
Query: 186 PAFCGLGPSHAAVGMNNQAAFYSLGEKVGKVVQRREYLGTITAIKLNETQAAVLTGGHVV 365
P F +G H AVGMNN+A FY LGE V K ++ EYLGT+ +I L+ AA L G +
Sbjct: 346 PNFVAVGLYHLAVGMNNRAWFYVLGENVVKKLKDVEYLGTVASICLHSDYAAALFEGKIQ 405
Query: 366 VHPISVEAGHAPDELDV-VIPGPGQPANITCVALTPTFVITGSRTGTLSYYLSPDVTPVN 542
+H I E A +E + + P I C ALT F+I G+ TG + Y+ D VN
Sbjct: 406 LHLIENEMLDAQEERETRLFPAVDDKCRILCHALTSDFLIYGTDTGIIQYFFIEDWQFVN 465
Query: 543 EFRHDDGGIVRLFPQATGARLVFEDDKGALHLFNPVNDHVVAVP-YTGRAETVMW 704
++RH G+ +LFP G RLVF D+K ++ PVND +P ++ + V+W
Sbjct: 466 DYRH-PVGVKKLFPDPNGTRLVFIDEKSDGFVYCPVNDATYEIPDFSPTIKGVLW 519
>ref|NP_079408.2| WD repeat membrane protein PWDMP [Homo sapiens]
gi|22651379|gb|AAK38745.1| WD repeat membrane protein
[Homo sapiens]
Length = 1342
Score = 154 bits (389), Expect = 1e-36
Identities = 90/235 (38%), Positives = 131/235 (55%), Gaps = 2/235 (0%)
Frame = +3
Query: 6 DGQVLTVGTHNGYMHSFLASLPMVYDFHGTRVLYLTSLLEMTLLDVSRRQTVARIELENE 185
DGQ+L + T G +H FL LP++ D TR+ YLTSLLE+T+ + + + ++ E
Sbjct: 330 DGQLLALSTQRGSLHVFLTKLPILGDACSTRIAYLTSLLEVTVANPVEGELPITVSVDVE 389
Query: 186 PAFCGLGPSHAAVGMNNQAAFYSLGEKVGKVVQRREYLGTITAIKLNETQAAVLTGGHVV 365
P F +G H AVGMNN+A FY LGE K ++ EYLGT+ +I L+ AA L G V
Sbjct: 390 PNFVAVGLYHLAVGMNNRAWFYVLGENAVKKLKDMEYLGTVASICLHSDYAAALFEGKVQ 449
Query: 366 VHPISVEAGHAPDELDV-VIPGPGQPANITCVALTPTFVITGSRTGTLSYYLSPDVTPVN 542
+H I E A +E + + P I C ALT F+I G+ TG + Y+ D VN
Sbjct: 450 LHLIESEILDAQEERETRLFPAVDDKCRILCHALTSDFLIYGTDTGVVQYFYIEDWQFVN 509
Query: 543 EFRHDDGGIVRLFPQATGARLVFEDDKGALHLFNPVNDHVVAVP-YTGRAETVMW 704
++RH + ++FP G RLVF D+K ++ PVND +P ++ + V+W
Sbjct: 510 DYRH-PVSVKKIFPDPNGTRLVFIDEKSDGFVYCPVNDATYEIPDFSPTIKGVLW 563
>dbj|BAC98223.1| mKIAA1638 protein [Mus musculus]
Length = 908
Score = 150 bits (378), Expect = 2e-35
Identities = 88/229 (38%), Positives = 129/229 (55%), Gaps = 2/229 (0%)
Frame = +3
Query: 24 VGTHNGYMHSFLASLPMVYDFHGTRVLYLTSLLEMTLLDVSRRQTVARIELENEPAFCGL 203
+ T G +H FL LP++ D TR+ YLTSLLE+T+ ++ + + ++ EP F +
Sbjct: 2 LSTQRGSLHVFLTKLPILGDACHTRIAYLTSLLEVTVANLIEGEPPITVSVDVEPTFVAV 61
Query: 204 GPSHAAVGMNNQAAFYSLGEKVGKVVQRREYLGTITAIKLNETQAAVLTGGHVVVHPISV 383
G H AVGMNN+A FY LGE V K ++ EYLGT+ +I L+ AA L G + +H I
Sbjct: 62 GLYHLAVGMNNRAWFYVLGENVVKKLKDVEYLGTVASICLHSDYAAALFEGKIQLHLIEN 121
Query: 384 EAGHAPDELDV-VIPGPGQPANITCVALTPTFVITGSRTGTLSYYLSPDVTPVNEFRHDD 560
E A +E + + P I C ALT F+I G+ TG + Y+ D VN++RH
Sbjct: 122 EMLDAQEERETRLFPAVDDKCRILCHALTSDFLIYGTDTGIIHYFFIEDWQFVNDYRH-P 180
Query: 561 GGIVRLFPQATGARLVFEDDKGALHLFNPVNDHVVAVP-YTGRAETVMW 704
G+ +LFP G RLVF D+K ++ PVND +P ++ + V+W
Sbjct: 181 VGVKKLFPDPNGTRLVFIDEKSDGFVYCPVNDATYEIPDFSPTIKGVLW 229
