KCC003462A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003462A_C01 KCC003462A_c01
ctcacaatggactgaggcgtcgctgacgggcgagtcggaccccatgaagaagaacaccac
agcggacccctgggtcatgtCGGGAACACAGGTGACGGAGGGTAGCGGGCGCGTGCTGGT
CACTGCCGTCGGCCCCAACAGCACTTGGGGCAAGACCATGGCCCTGGTGAGCGAGGCGGG
CGACGACGAGACGCCGCTGCAGCAGAAGCTGGAGGTGCTGGCCGGCGCGATCGGCAAGGT
CGGTTTCGCGGTGGCCATCTGCTGCTTCATCTGCACAGCTCATCAATGTGGTGCTGTGGA
GAACAACGGCTTCCCCATCAGTGAGATTAACAACAACGTGCCCCATCCAGTTCTTCCTGT
ACGCCATCACCATCATCGTGGTGTGCTGGTGCCCGAGGGCCTGCCACTGGCCTGTGACCA
TCTCGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003462A_C01 KCC003462A_c01
         (426 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAM44081.1| type IIB calcium ATPase MCA5 [Medicago truncatula]      92  2e-18
gb|AAG28435.1|AF195028_1 plasma membrane Ca2+-ATPase [Glycine max]     91  5e-18
ref|NP_179879.1| potential calcium-transporting ATPase 7, plasma...    90  6e-18
gb|AAG28436.1|AF195029_1 plasma membrane Ca2+-ATPase [Glycine max]     87  2e-17
ref|NP_195479.1| calcium-transporting ATPase 2, plasma membrane-...    88  3e-17

>gb|AAM44081.1| type IIB calcium ATPase MCA5 [Medicago truncatula]
          Length = 1014

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 63/141 (44%), Positives = 81/141 (56%), Gaps = 8/141 (5%)
 Frame = +2

Query: 14  EASLTGESDPMKKNTTADPWVMSGTQVTEGSGRVLVTAVGPNSTWGKTMALVSEAGDDET 193
           E+SLTGES+P+  NT  +P+++SGT+V +GS ++LVT VG  + WGK MA +SE GDDET
Sbjct: 285 ESSLTGESEPVVVNTE-NPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDET 343

Query: 194 PLQQKLEVLAGAIGKVGFAVAICCFICTAHQCGAV----EN----NGFPISEINNNVPHP 349
           PLQ KL  +A  IGK+G   AI  F        ++    EN    NG    E+       
Sbjct: 344 PLQVKLNGVATIIGKIGLFFAIVTFAVLVQGLVSLKLQQENFWNWNGDDALEMLEYFAIA 403

Query: 350 VLPVRHHHHRGVLVPEGLPLA 412
           V  V       V VPEGLPLA
Sbjct: 404 VTIV------VVAVPEGLPLA 418

>gb|AAG28435.1|AF195028_1 plasma membrane Ca2+-ATPase [Glycine max]
          Length = 1014

 Score = 90.5 bits (223), Expect = 5e-18
 Identities = 61/141 (43%), Positives = 84/141 (59%), Gaps = 8/141 (5%)
 Frame = +2

Query: 14  EASLTGESDPMKKNTTADPWVMSGTQVTEGSGRVLVTAVGPNSTWGKTMALVSEAGDDET 193
           E+SLTGES+P+  N+  +P+++SGT+V +GS ++LVT+VG  + WGK MA +SE GDDET
Sbjct: 284 ESSLTGESEPVMVNSE-NPFLLSGTKVQDGSCKMLVTSVGMRTQWGKLMATLSEGGDDET 342

Query: 194 PLQQKLEVLAGAIGKVG-------FAVAICCFICTAHQCGAVEN-NGFPISEINNNVPHP 349
           PLQ KL  +A  IGK+G       FAV +   +    Q G++ +  G    E+       
Sbjct: 343 PLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLVSLKLQQGSLRSWTGDDALELLEFFAVA 402

Query: 350 VLPVRHHHHRGVLVPEGLPLA 412
           V  V       V VPEGLPLA
Sbjct: 403 VTIVV------VAVPEGLPLA 417

>ref|NP_179879.1| potential calcium-transporting ATPase 7, plasma membrane-type
           (Ca2+-ATPase, isoform 7) [Arabidopsis thaliana]
           gi|12229638|sp|O64806|ACA7_ARATH Potential
           calcium-transporting ATPase 7, plasma membrane-type
           (Ca(2+)-ATPase isoform 7) gi|25290669|pir||H84618
           probable Ca2+-ATPase [imported] - Arabidopsis thaliana
           gi|20197272|gb|AAM15005.1| putative Ca2+-ATPase
           [Arabidopsis thaliana]
          Length = 1015

 Score = 90.1 bits (222), Expect = 6e-18
 Identities = 46/85 (54%), Positives = 62/85 (72%)
 Frame = +2

Query: 14  EASLTGESDPMKKNTTADPWVMSGTQVTEGSGRVLVTAVGPNSTWGKTMALVSEAGDDET 193
           E+SLTGES+P+   T  +P+++SGT+V +GS ++LVT VG  + WGK MA +SE GDDET
Sbjct: 285 ESSLTGESEPVMV-TAQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDET 343

Query: 194 PLQQKLEVLAGAIGKVGFAVAICCF 268
           PLQ KL  +A  IGK+G + AI  F
Sbjct: 344 PLQVKLNGVATIIGKIGLSFAIVTF 368

>gb|AAG28436.1|AF195029_1 plasma membrane Ca2+-ATPase [Glycine max]
          Length = 1019

 Score = 87.0 bits (214), Expect(2) = 2e-17
 Identities = 44/85 (51%), Positives = 61/85 (71%)
 Frame = +2

Query: 14  EASLTGESDPMKKNTTADPWVMSGTQVTEGSGRVLVTAVGPNSTWGKTMALVSEAGDDET 193
           E+SLTGES+P+  +   +P+++SGT+V +GS ++LVT VG  + WGK MA +SE GDDET
Sbjct: 286 ESSLTGESEPVNVSEL-NPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDET 344

Query: 194 PLQQKLEVLAGAIGKVGFAVAICCF 268
           PLQ KL  +A  IGK+G   A+  F
Sbjct: 345 PLQVKLNGVATIIGKIGLFFAVVTF 369

 Score = 21.9 bits (45), Expect(2) = 2e-17
 Identities = 11/27 (40%), Positives = 16/27 (58%)
 Frame = +3

Query: 345 IQFFLYAITIIVVCWCPRACHWPVTIS 425
           ++FF  A+TI+VV   P      VT+S
Sbjct: 398 VEFFAIAVTIVVVA-VPEGLPLAVTLS 423

>ref|NP_195479.1| calcium-transporting ATPase 2, plasma membrane-type (Ca2+-ATPase,
           isoform 2) [Arabidopsis thaliana]
           gi|12229639|sp|O81108|ACA2_ARATH Calcium-transporting
           ATPase 2, plasma membrane-type (Ca(2+)-ATPase isoform 2)
           gi|7436361|pir||T04721 Ca2+-transporting ATPase (EC
           3.6.3.8) ACA2, calmodulin-regulated [validated] -
           Arabidopsis thaliana gi|3335060|gb|AAC26997.1| plasma
           membrane-type calcium ATPase [Arabidopsis thaliana]
           gi|4468989|emb|CAB38303.1| plasma membrane-type calcium
           ATPase (ACA2) [Arabidopsis thaliana]
           gi|7270746|emb|CAB80429.1| plasma membrane-type calcium
           ATPase (ACA2) [Arabidopsis thaliana]
           gi|17064816|gb|AAL32562.1| plasma membrane-type calcium
           ATPase (ACA2) [Arabidopsis thaliana]
           gi|37201998|gb|AAQ89614.1| At4g37640 [Arabidopsis
           thaliana]
          Length = 1014

 Score = 87.8 bits (216), Expect = 3e-17
 Identities = 43/85 (50%), Positives = 61/85 (71%)
 Frame = +2

Query: 14  EASLTGESDPMKKNTTADPWVMSGTQVTEGSGRVLVTAVGPNSTWGKTMALVSEAGDDET 193
           E+SLTGES+P+  N   +P++MSGT+V +GS ++++T VG  + WGK MA ++E GDDET
Sbjct: 284 ESSLTGESEPVMVNAQ-NPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMATLTEGGDDET 342

Query: 194 PLQQKLEVLAGAIGKVGFAVAICCF 268
           PLQ KL  +A  IGK+G   A+  F
Sbjct: 343 PLQVKLNGVATIIGKIGLFFAVVTF 367



EST assemble image


clone accession position
1 MXL058e11_r BP096427 1 353
2 MXL032a07_r BP094902 254 426




Chlamydomonas reinhardtii
Kazusa DNA Research Institute