KCC003446A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003446A_C01 KCC003446A_c01
cGCCACCTTAAGCAATGCTTTCTTCGCGGAGCTGGCTGTTTGGGTGTTGCTGAGCGAAGC
CCTATTGACCCGAAGGACTTGAACATCAAACCTGGCTAGGCGTCGCAATGTCGTCCACCT
ACAGAGCCCTGTTCGTCTTCGGAGTCCTCCTAGCTAGCGCTTGCTCTTCGCTGGCGACAC
GTGATGTCGCGTCGGAGTCGCGGCTGTCCTCTGCCGGCGAAGGCCGCAAATACATTCGCG
ACAACGTCGTTAACAAGAAGCCGAAGCCAGCTAGCGGCGATGGCGACGAGCCAATTCTCC
TGCCCAAGCCGACGAGTTTTGGCTATCTCGACGTGAACAAGGGCAAGGGGAGCAAGATGT
ATCACATGTTCTACGAGGCGCAGGAGGCTCCAGCCGGCAGCTCGCGGGTCCCAATCGTGT
TGTGGCTGCAGGGCGGCCCCGGTTGCTCCTCCTTTTTCGGCATGTTCTACATCAACGGCC
CCTACTTTGTCAACGACGACCTGACCCTGCGCGAGAACCTGGGCGCCTGGAACC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003446A_C01 KCC003446A_c01
         (534 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_172953.1| serine carboxypeptidase -related [Arabidopsis t...    80  2e-14
gb|AAH51154.1| Similar to carboxypeptidase, vitellogenic-like [D...    72  6e-12
dbj|BAA94235.1| unnamed protein product [Oryza sativa (japonica ...    70  2e-11
dbj|BAC11618.1| unnamed protein product [Homo sapiens]                 68  7e-11
sp|Q9H3G5|CPVL_HUMAN Probable serine carboxypeptidase CPVL precu...    68  7e-11

>ref|NP_172953.1| serine carboxypeptidase -related [Arabidopsis thaliana]
           gi|25513545|pir||D86283 T15D22.4 protein - Arabidopsis
           thaliana gi|6899645|gb|AAF31022.1|AC012189_4 Contains
           similarity to serine-type carboxypeptidase like protein
           from Arabidopsis thaliana gi|4678929 and contains two
           Serine carboxypeptidase domains PF|00450
           gi|19715607|gb|AAL91626.1| At1g15000/T15D22_7
           [Arabidopsis thaliana] gi|27363234|gb|AAO11536.1|
           At1g15000/T15D22_7 [Arabidopsis thaliana]
          Length = 444

 Score = 79.7 bits (195), Expect = 2e-14
 Identities = 43/91 (47%), Positives = 51/91 (55%), Gaps = 4/91 (4%)
 Frame = +3

Query: 273 SGDGDEPILLPK---PTSFGYLDVNKGKGSKMYHMFYEAQEAPAGSSRVPIVLWLQGGPG 443
           S +  +P L P    PT  GYL V    GS M++ FYEAQE        P+++WLQGGPG
Sbjct: 19  SVESPQPPLFPDEALPTKSGYLPVKPAPGSSMFYAFYEAQEPTTPLPDTPLLVWLQGGPG 78

Query: 444 CSSFFGMFYINGPYFVNDDLT-LRENLGAWN 533
           CSS  G FY  GP+ V    T L  N GAWN
Sbjct: 79  CSSMIGNFYELGPWRVVSRATDLERNPGAWN 109

>gb|AAH51154.1| Similar to carboxypeptidase, vitellogenic-like [Danio rerio]
          Length = 478

 Score = 71.6 bits (174), Expect = 6e-12
 Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
 Frame = +3

Query: 108 MSSTYRALFVFGVL---LASACSSLATRDVASESRLSSAGEGRK------YIRDNVVNKK 260
           +  T R LFV+ VL    +  CSS   R     S      +  K      Y+    + ++
Sbjct: 2   LKETLRLLFVWAVLESVCSRGCSSFFCRKTRRVSGSRFGADPGKPLMLTPYLEQGKI-EE 60

Query: 261 PKPASGDGDEPILLPKPTSFGYLDVNKGKGSKMYHMFYEAQEAPAGSSRVPIVLWLQGGP 440
            K  S  G  P    K  S GYL VNK   S ++  F+ AQE P      P++LWLQGGP
Sbjct: 61  AKKLSLVGPLPGANVKSYS-GYLTVNKTYNSNLFFWFFPAQERP---ETAPVLLWLQGGP 116

Query: 441 GCSSFFGMFYINGPYFVNDDLTL 509
           G +S FG+F  +GPYFV  +LTL
Sbjct: 117 GGTSMFGLFVEHGPYFVYKNLTL 139

>dbj|BAA94235.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
           gi|14164484|dbj|BAB55735.1| OSJNBa0038J17.27 [Oryza
           sativa (japonica cultivar-group)]
          Length = 429

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 36/76 (47%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = +3

Query: 309 PTSFGYLDVNKGKGSKMYHMFYEAQEAPAGSSRVPIVLWLQGGPGCSSFFGMFYINGPYF 488
           PT  GYL +     S ++  +YEA       +  PI+LWLQGGPGCS   G F+  GPYF
Sbjct: 22  PTKSGYLPIPTANAS-LFFAYYEATHLLTPPASTPIILWLQGGPGCSGLTGNFFELGPYF 80

Query: 489 VNDD-LTLRENLGAWN 533
           VN D L+L  N  AWN
Sbjct: 81  VNHDALSLSPNPFAWN 96

>dbj|BAC11618.1| unnamed protein product [Homo sapiens]
          Length = 476

 Score = 68.2 bits (165), Expect = 7e-11
 Identities = 33/70 (47%), Positives = 44/70 (62%)
 Frame = +3

Query: 321 GYLDVNKGKGSKMYHMFYEAQEAPAGSSRVPIVLWLQGGPGCSSFFGMFYINGPYFVNDD 500
           G+L VNK   S ++  F+ AQ  P  +   P+VLWLQGGPG SS FG+F  +GPY V  +
Sbjct: 76  GFLTVNKTYNSNLFFWFFPAQIQPEDA---PVVLWLQGGPGGSSMFGLFVEHGPYVVTSN 132

Query: 501 LTLRENLGAW 530
           +TLR+    W
Sbjct: 133 MTLRDRDFPW 142

>sp|Q9H3G5|CPVL_HUMAN Probable serine carboxypeptidase CPVL precursor (Carboxypeptidase,
           vitellogenic-like) (Vitellogenic carboxypeptidase-like
           protein) (VCP-like protein)
           gi|12060148|gb|AAG37991.2|AF106704_1 putative serine
           carboxypeptidase CPVL [Homo sapiens]
          Length = 476

 Score = 68.2 bits (165), Expect = 7e-11
 Identities = 33/70 (47%), Positives = 44/70 (62%)
 Frame = +3

Query: 321 GYLDVNKGKGSKMYHMFYEAQEAPAGSSRVPIVLWLQGGPGCSSFFGMFYINGPYFVNDD 500
           G+L VNK   S ++  F+ AQ  P  +   P+VLWLQGGPG SS FG+F  +GPY V  +
Sbjct: 76  GFLTVNKTYNSNLFFWFFPAQIQPEDA---PVVLWLQGGPGGSSMFGLFVEHGPYVVTSN 132

Query: 501 LTLRENLGAW 530
           +TLR+    W
Sbjct: 133 MTLRDRDFPW 142



EST assemble image


clone accession position
1 MXL020e11_r BP094285 1 534
2 MXL096a12_r BP098598 2 483




Chlamydomonas reinhardtii
Kazusa DNA Research Institute