KCC003439A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003439A_C01 KCC003439A_c01
caacaacgccggcggcccaggccccgtgccgctcagcttcctgaccgctagcggcagcgc
caacagcggcgcgacaggcgTCGGCGCGGCAGGCGCAGCTGCGGGCGTGGGACTGGGCGG
CCATCGGGCGTCGTCCCCCATGGACATGATTACAGCGGCATCTGTGGCGGCGGCCTCGGC
AGGCGTCGTGGCGGCGGGCGGTCTGGGTGACGGCAGCGGGGGGCGGCCGTCTCGCTCAGA
CGGGATGGTGAACATGCTGCAGATGACGCCGCAGCAGGTCACCCAGCAGCAGCTGATGGC
GCAGATGCAGCAACAGCAGTCGCAGCAGATGGCAGCGGCGGCGGCGACAAGCGGCAGCGG
CGGCCTGGGCCACCTGGCCGTCTCCTACAGCATGGATACCGCTTTTATGACGTCCCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCGCCTGCAGCAGCAGGCCCAACAGCTGCAGGCCCA
ACAACAGCAGCAGCAGGCCCAGGGCCCATCGTCCGGCATTGAGCTGTCTGCTGGGCTGTC
GCAGATGCAGCAGCCGCAGCAGCAGCAGGCGCTGACGGGCGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003439A_C01 KCC003439A_c01
         (582 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_572516.1| CG15365-PA [Drosophila melanogaster] gi|7290995...    73  3e-12
gb|AAH46263.1| Similar to PC2 (positive cofactor 2, multiprotein...    72  6e-12
gb|AAO01077.1| Scr-PA [Drosophila littoralis]                          72  7e-12
dbj|BAB20792.1| master of thick veins [Drosophila melanogaster]        72  7e-12
ref|NP_524678.2| scribbler CG5580-PA [Drosophila melanogaster] g...    72  7e-12

>ref|NP_572516.1| CG15365-PA [Drosophila melanogaster] gi|7290995|gb|AAF46433.1|
           CG15365-PA [Drosophila melanogaster]
          Length = 821

 Score = 72.8 bits (177), Expect = 3e-12
 Identities = 62/180 (34%), Positives = 84/180 (46%), Gaps = 8/180 (4%)
 Frame = +2

Query: 59  ANSGATGVGAAGAAAGVGLGGHRASSPMDMITAASVAAASAGVVAAGGLGDGSGGRPSRS 238
           +N    GVG  G   G+G+G    S   ++     ++ +  G    GG GDG GG  +  
Sbjct: 108 SNLDDEGVGI-GVGMGMGMGLQMRSKFQNIRQMFELSRSCVG----GGGGDGRGGA-AEE 161

Query: 239 DGMVNMLQMTPQQVTQQQ------LMAQMQQQQSQQMAAAAATSGS--GGLGHLAVSYSM 394
           + M ++    PQQ  QQQ      +    + QQ QQM  A  TSG+    +    + +  
Sbjct: 162 EAMQSLPATLPQQHQQQQQRRTTPIAGGSRHQQQQQMGEAEQTSGNFLRPIAFKPIPFEP 221

Query: 395 DTAFMTSQQQQQQQQQQRLQQQAQQLQAQQQQQQAQGPSSGIELSAGLSQMQQPQQQQAL 574
           D   +  QQQQQ QQQ +LQQQ QQ Q QQQQQQ Q      +      Q Q  QQ Q+L
Sbjct: 222 DYR-IACQQQQQHQQQLQLQQQQQQQQQQQQQQQLQLQHQQQQQHQQQHQHQHQQQHQSL 280

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 30/54 (55%), Positives = 33/54 (60%)
 Frame = +2

Query: 407 MTSQQQQQQQQQQRLQQQAQQLQAQQQQQQAQGPSSGIELSAGLSQMQQPQQQQ 568
           +  QQQQQQQQQQ+ QQQ QQ Q QQQQQQ Q      +    L Q  QP QQQ
Sbjct: 572 LQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ-----QQQQQLKQQHQPDQQQ 620

 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 35/91 (38%), Positives = 43/91 (46%), Gaps = 4/91 (4%)
 Frame = +2

Query: 314 QQSQQMAAAAATSGSGGLGHLAVSYSMDTAFMTSQQQQQQ----QQQQRLQQQAQQLQAQ 481
           + S   +++++ S S        S S        +QQQQQ    QQQQ+ QQQ QQ Q Q
Sbjct: 529 KHSSNRSSSSSNSNSNKSCDTNTSQSQPKQQAKEEQQQQQHPELQQQQQQQQQQQQQQQQ 588

Query: 482 QQQQQAQGPSSGIELSAGLSQMQQPQQQQAL 574
           QQQQQ Q             Q QQ QQQQ L
Sbjct: 589 QQQQQQQQQQ---------QQQQQQQQQQQL 610

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 29/98 (29%), Positives = 45/98 (45%)
 Frame = +2

Query: 275 QVTQQQLMAQMQQQQSQQMAAAAATSGSGGLGHLAVSYSMDTAFMTSQQQQQQQQQQRLQ 454
           Q+ +  L   M+      +  ++  S S    +   S   +T+    +QQ +++QQQ+  
Sbjct: 510 QLKEAHLEINMKDHAIVSLKHSSNRSSSSSNSNSNKSCDTNTSQSQPKQQAKEEQQQQQH 569

Query: 455 QQAQQLQAQQQQQQAQGPSSGIELSAGLSQMQQPQQQQ 568
            + QQ Q QQQQQQ Q      +      Q QQ QQQQ
Sbjct: 570 PELQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 607

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 33/96 (34%), Positives = 38/96 (39%)
 Frame = +2

Query: 215 SGGRPSRSDGMVNMLQMTPQQVTQQQLMAQMQQQQSQQMAAAAATSGSGGLGHLAVSYSM 394
           S  +P +        Q  P+   QQQ   Q QQQQ QQ                      
Sbjct: 552 SQSQPKQQAKEEQQQQQHPELQQQQQQQQQQQQQQQQQQ--------------------- 590

Query: 395 DTAFMTSQQQQQQQQQQRLQQQAQQLQAQQQQQQAQ 502
                  QQQQQQQQQQ+ QQQ  + Q Q  QQQ Q
Sbjct: 591 ----QQQQQQQQQQQQQQQQQQQLKQQHQPDQQQLQ 622

 Score = 43.1 bits (100), Expect = 0.003
 Identities = 31/78 (39%), Positives = 34/78 (42%)
 Frame = +2

Query: 257 LQMTPQQVTQQQLMAQMQQQQSQQMAAAAATSGSGGLGHLAVSYSMDTAFMTSQQQQQQQ 436
           LQ   QQ  QQQ   Q QQQQ QQ                             QQQQQQQ
Sbjct: 572 LQQQQQQQQQQQQQQQQQQQQQQQQQ--------------------------QQQQQQQQ 605

Query: 437 QQQRLQQQAQQLQAQQQQ 490
           QQQ+L+QQ Q  Q Q Q+
Sbjct: 606 QQQQLKQQHQPDQQQLQK 623

>gb|AAH46263.1| Similar to PC2 (positive cofactor 2, multiprotein complex)
           glutamine/Q-rich-associated protein [Xenopus laevis]
          Length = 846

 Score = 72.0 bits (175), Expect = 6e-12
 Identities = 58/182 (31%), Positives = 77/182 (41%), Gaps = 1/182 (0%)
 Frame = +2

Query: 32  LSFLTASGSANSGATGVGAAGAAAGVGLGGHRASSPMDMITAASVAAASAGVVAAGGLGD 211
           L  LT +        G+G     A +G  G        M         ++G+   G  G 
Sbjct: 69  LQNLTGNAVVGGQGMGMGVRPQGAQMGAMGGMTQIAQQMNLPGQSQPGASGMAPHGITGV 128

Query: 212 GSGGRPSRSDGMVNMLQMTPQQVTQQQLMAQMQ-QQQSQQMAAAAATSGSGGLGHLAVSY 388
            +G + ++   +  M Q   QQ  QQQ  A +Q QQQ QQ     A      +  +A + 
Sbjct: 129 AAGNQATQLQ-LQQMAQHQQQQFQQQQHQAALQHQQQHQQQQFQVAQQQQFQVAAVAAAQ 187

Query: 389 SMDTAFMTSQQQQQQQQQQRLQQQAQQLQAQQQQQQAQGPSSGIELSAGLSQMQQPQQQQ 568
                    QQQQQQ QQQ+ QQQ QQ+Q QQQQQ  Q     ++      Q QQ QQQQ
Sbjct: 188 QQQQQQQQQQQQQQQVQQQQQQQQQQQVQQQQQQQVQQQQQQQVQ----QQQQQQVQQQQ 243

Query: 569 AL 574
            L
Sbjct: 244 QL 245

 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 42/108 (38%), Positives = 50/108 (45%), Gaps = 2/108 (1%)
 Frame = +2

Query: 260 QMTPQQVTQQQLMAQMQQQQSQQMAAAAATSGSGGLGHLAVSYSMDTAFMTSQQQQQQQQ 439
           Q   QQ  QQQ   Q+QQQQ QQ            +                QQQQQ QQ
Sbjct: 188 QQQQQQQQQQQQQQQVQQQQQQQQQQQVQQQQQQQVQQQQQQQVQQQQQQQVQQQQQLQQ 247

Query: 440 QQRLQQQA--QQLQAQQQQQQAQGPSSGIELSAGLSQMQQPQQQQALT 577
           QQ+LQ+ A  Q  Q QQQQQQ Q P   +     + Q+ Q QQQQ L+
Sbjct: 248 QQQLQRMAHLQMQQMQQQQQQQQPPPPQVMQLQQMQQVAQSQQQQLLS 295

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 44/104 (42%), Positives = 51/104 (48%), Gaps = 3/104 (2%)
 Frame = +2

Query: 263 MTPQQVTQQQLMAQM--QQQQSQQMAAAAATSGSGGLGHLAVSYSMDTAFMTSQQQQQQQ 436
           +TPQQ  Q +L+ Q+  QQ Q+QQ A   A   +              A     QQQQ Q
Sbjct: 318 LTPQQQQQLKLLQQVRVQQHQAQQQAQQQAQQQA----------QQQQAQQQQAQQQQAQ 367

Query: 437 QQQRLQQQAQQLQAQQQQ-QQAQGPSSGIELSAGLSQMQQPQQQ 565
           QQQ  QQQAQQ QAQQQQ QQ Q      +      Q QQ QQQ
Sbjct: 368 QQQAQQQQAQQQQAQQQQAQQQQAQQQQAQQQQAQQQAQQAQQQ 411

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 45/108 (41%), Positives = 48/108 (43%)
 Frame = +2

Query: 248 VNMLQMTPQQVTQQQLMAQMQQQQSQQMAAAAATSGSGGLGHLAVSYSMDTAFMTSQQQQ 427
           V + Q   QQ  QQQ   Q QQQQ+QQ  A                     A     QQQ
Sbjct: 332 VRVQQHQAQQQAQQQAQQQAQQQQAQQQQA-----------------QQQQAQQQQAQQQ 374

Query: 428 QQQQQQRLQQQAQQLQAQQQQQQAQGPSSGIELSAGLSQMQQPQQQQA 571
           Q QQQQ  QQQAQQ QAQQQQ Q Q      +      Q QQ  QQQA
Sbjct: 375 QAQQQQAQQQQAQQQQAQQQQAQQQ------QAQQQAQQAQQQAQQQA 416

 Score = 54.7 bits (130), Expect = 9e-07
 Identities = 43/112 (38%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
 Frame = +2

Query: 260 QMTPQQVTQQQLMAQMQQQQSQQMAAAAATSGSGGLGHLAVSYSMDTAFMTSQQQQQQQQ 439
           Q   QQ  QQQ  AQ  QQQ+QQ A  AA        H A +     A      +Q Q  
Sbjct: 394 QQAQQQQAQQQ--AQQAQQQAQQQAQQAAQKHQAAQQHQA-AQQHQAAQQHQAAKQHQAA 450

Query: 440 QQRLQQQAQQLQAQQQQQQAQGPSSGIELSAG------LSQMQQPQQQQALT 577
           QQ+ QQ AQQ Q Q QQQ AQ  ++   L+AG      +  M  P   QA T
Sbjct: 451 QQQAQQAAQQAQQQAQQQAAQQQAAQAHLAAGQVNQNSIPVMSSPSPVQAQT 502

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 47/123 (38%), Positives = 53/123 (42%), Gaps = 19/123 (15%)
 Frame = +2

Query: 260 QMTPQQVTQQQLMAQMQQQQSQQMAAAAATSGSGGLGHLAVSYSMDTAFMTSQQQQ---- 427
           Q  P QV Q Q M Q+ Q Q QQ+ +    + S        S  M       QQQQ    
Sbjct: 270 QPPPPQVMQLQQMQQVAQSQQQQLLSTQPQAPSLVAQGQIPSQVMPVTLTPQQQQQLKLL 329

Query: 428 --------------QQQ-QQQRLQQQAQQLQAQQQQQQAQGPSSGIELSAGLSQMQQPQQ 562
                         QQQ QQQ  QQQAQQ QAQQQQ Q Q      +     +Q QQ QQ
Sbjct: 330 QQVRVQQHQAQQQAQQQAQQQAQQQQAQQQQAQQQQAQQQ------QAQQQQAQQQQAQQ 383

Query: 563 QQA 571
           QQA
Sbjct: 384 QQA 386

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 44/116 (37%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
 Frame = +2

Query: 257 LQMTPQQVTQQQLMAQMQQQQSQQMAAAAATSGSGGLGHLAVSYSMDTAFMTSQQQQQQQ 436
           +Q   QQ  QQQ   Q+QQQQ QQ+           L  +A            QQQQQQQ
Sbjct: 215 VQQQQQQQVQQQQQQQVQQQQQQQVQQQQQLQQQQQLQRMAHLQMQQM----QQQQQQQQ 270

Query: 437 ----QQQRLQQQAQQLQAQQQQ---QQAQGPS---SGIELSAGLSQMQQPQQQQAL 574
               Q  +LQQ  Q  Q+QQQQ    Q Q PS    G   S  +     PQQQQ L
Sbjct: 271 PPPPQVMQLQQMQQVAQSQQQQLLSTQPQAPSLVAQGQIPSQVMPVTLTPQQQQQL 326

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 35/105 (33%), Positives = 42/105 (39%), Gaps = 1/105 (0%)
 Frame = +2

Query: 260 QMTPQQVTQQQLMAQMQQQQSQQMAAAAATSGSGGLGHLAVSYSMDTAFMTSQQQQQQQQ 439
           Q   QQ  QQQ   Q  QQQ  Q   A                +   A   +QQ  Q+ Q
Sbjct: 365 QAQQQQAQQQQAQQQQAQQQQAQQQQAQQQQAQQQQAQQQAQQAQQQAQQQAQQAAQKHQ 424

Query: 440 QQRLQQQAQQLQAQQQQQQA-QGPSSGIELSAGLSQMQQPQQQQA 571
             +  Q AQQ QA QQ Q A Q  ++  +      Q QQ  QQQA
Sbjct: 425 AAQQHQAAQQHQAAQQHQAAKQHQAAQQQAQQAAQQAQQQAQQQA 469

 Score = 40.4 bits (93), Expect = 0.018
 Identities = 33/106 (31%), Positives = 39/106 (36%), Gaps = 4/106 (3%)
 Frame = +2

Query: 260 QMTPQQVTQQQLMAQMQQQQSQQMAAA----AATSGSGGLGHLAVSYSMDTAFMTSQQQQ 427
           Q   QQ  QQ   A  + Q +QQ  AA    AA        H A       A   +QQQ 
Sbjct: 406 QQAQQQAQQQAQQAAQKHQAAQQHQAAQQHQAAQQHQAAKQHQAAQQQAQQAAQQAQQQA 465

Query: 428 QQQQQQRLQQQAQQLQAQQQQQQAQGPSSGIELSAGLSQMQQPQQQ 565
           QQQ  Q+   QA     Q  Q      SS   + A  +Q   P  Q
Sbjct: 466 QQQAAQQQAAQAHLAAGQVNQNSIPVMSSPSPVQAQTTQSMPPPPQ 511

>gb|AAO01077.1| Scr-PA [Drosophila littoralis]
          Length = 323

 Score = 71.6 bits (174), Expect = 7e-12
 Identities = 59/158 (37%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
 Frame = +2

Query: 53  GSANSGATGVGAAGAAAGVGLGGHRASSPMDMITAASVAA---------ASAGVVAAGGL 205
           G+  S     GA GA  G G  G       D   AA+            A     AA GL
Sbjct: 33  GANGSTGNSGGAGGANGGQGNSGSATPGGNDYFPAAAAYTPNLYPNTPQAHYANQAAYGL 92

Query: 206 GDGSGGRPSRSDGMVNMLQMTPQQVTQQQLMAQMQQQQSQQMAAAAATSGSGGLGHLAVS 385
           G G GG P       +M+  T  Q+  Q+L+ Q QQQQ Q   A AA             
Sbjct: 93  G-GGGGAPGGGQANPDMVDYT--QLQPQRLLLQQQQQQQQHAHATAA------------- 136

Query: 386 YSMDTAFMTSQQQQQQQQQQRLQQQAQQLQAQQQQQQA 499
                  + +QQQQQQQQQQ+L QQ QQL  QQQQQQA
Sbjct: 137 -------VVAQQQQQQQQQQQLPQQQQQLPQQQQQQQA 167

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 45/160 (28%), Positives = 58/160 (36%), Gaps = 15/160 (9%)
 Frame = +2

Query: 137 PMDMITAASVAAASAGVVAAGGLGDGSGGR--------------PSRSDGMVNMLQMTPQ 274
           P  M    S   A+     +GG G  +GG+              P+ +    N+   TPQ
Sbjct: 22  PQQMNPQQSHPGANGSTGNSGGAGGANGGQGNSGSATPGGNDYFPAAAAYTPNLYPNTPQ 81

Query: 275 QVTQQQLMAQMQQQQSQQMAAAAATSGSGGLGHLAVSYS-MDTAFMTSQQQQQQQQQQRL 451
                   A    Q +  +       G G      V Y+ +    +  QQQQQQQQ    
Sbjct: 82  --------AHYANQAAYGLGGGGGAPGGGQANPDMVDYTQLQPQRLLLQQQQQQQQHAHA 133

Query: 452 QQQAQQLQAQQQQQQAQGPSSGIELSAGLSQMQQPQQQQA 571
                  Q QQQQQQ Q P    +L       QQ QQQQA
Sbjct: 134 TAAVVAQQQQQQQQQQQLPQQQQQLP------QQQQQQQA 167

>dbj|BAB20792.1| master of thick veins [Drosophila melanogaster]
          Length = 2310

 Score = 71.6 bits (174), Expect = 7e-12
 Identities = 51/138 (36%), Positives = 65/138 (46%)
 Frame = +2

Query: 152  TAASVAAASAGVVAAGGLGDGSGGRPSRSDGMVNMLQMTPQQVTQQQLMAQMQQQQSQQM 331
            +AA+ AAA+A   A+GGL    G       GM +  Q   QQ  QQ  +AQ QQQ  QQ 
Sbjct: 1874 SAAAAAAAAAQNAASGGLPPHPGMMHKDEPGMGSAAQQQQQQQQQQMQIAQQQQQAIQQH 1933

Query: 332  AAAAATSGSGGLGHLAVSYSMDTAFMTSQQQQQQQQQQRLQQQAQQLQAQQQQQQAQGPS 511
                         HL   +         Q QQQQQQQQ+ QQQ QQ Q QQ+ +Q+Q  S
Sbjct: 1934 HQ-----------HLQQQHQAQQQQQQQQHQQQQQQQQQQQQQQQQQQQQQKLKQSQAAS 1982

Query: 512  SGIELSAGLSQMQQPQQQ 565
            +G    A       P+Q+
Sbjct: 1983 AGANNKATNLTKDSPKQK 2000

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 43/120 (35%), Positives = 58/120 (47%), Gaps = 15/120 (12%)
 Frame = +2

Query: 260  QMTPQQVTQQQLMAQMQQQQSQQMAAAAATSGSGGLG-HLAVSYSMDTAFMTSQQQQQQQ 436
            Q   +++ +  +    Q   +   AAAA  + SGGL  H  + +  +    ++ QQQQQQ
Sbjct: 1856 QAREEELRRYYMFTGRQNSAAAAAAAAAQNAASGGLPPHPGMMHKDEPGMGSAAQQQQQQ 1915

Query: 437  QQQRLQ-----QQA---------QQLQAQQQQQQAQGPSSGIELSAGLSQMQQPQQQQAL 574
            QQQ++Q     QQA         QQ QAQQQQQQ Q      +      Q QQ QQQQ L
Sbjct: 1916 QQQQMQIAQQQQQAIQQHHQHLQQQHQAQQQQQQQQHQQQQQQQQQQQQQQQQQQQQQKL 1975

 Score = 45.8 bits (107), Expect = 4e-04
 Identities = 49/179 (27%), Positives = 66/179 (36%), Gaps = 16/179 (8%)
 Frame = +2

Query: 92   GAAAGVGLGGHRASSPMDMITAASVAAASAGVVAAGGLGDGSG-------GRPSRSDGMV 250
            G A+G G G   ASS +   TA S    +  V     L + S          P+     +
Sbjct: 1174 GVASGTGSGASVASSAVPA-TAPSAGQGTVAVSPNTPLANSSNPVTNVAPSAPATGSVTI 1232

Query: 251  NMLQMTPQQVTQQQLMAQMQQQQSQQMAAAAATSGSGG---------LGHLAVSYSMDTA 403
                 TP  V  Q  +               A +  G          LG+L ++   ++A
Sbjct: 1233 AAPNTTPSVVETQAPLTGPPPVTPPAPTPICAVATPGAEQSVSSVLPLGNLPITAGPNSA 1292

Query: 404  FMTSQQQQQQQQQQRLQQQAQQLQAQQQQQQAQGPSSGIELSAGLSQMQQPQQQQALTG 580
                Q   QQQQ Q L         QQQQQQ Q P +G  ++AG+S     Q QQ L G
Sbjct: 1293 TQQQQPPTQQQQPQLLVPGGSAASLQQQQQQQQ-PVAGGSITAGISGQALSQHQQQLMG 1350

 Score = 37.0 bits (84), Expect = 0.20
 Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
 Frame = +1

Query: 256  AADDAAAGHPAAADGADAATAVAADGSGGGDKRQRRPGPPGRLLQHGYRFYDVPAAAAAA 435
            AA    A   AA+  A    + +A G GG       PGPPG+      +     AA  AA
Sbjct: 721  AAASLLAATGAASSSASQMASSSAGGVGGSGGGANAPGPPGKESAGSIKISSHIAAQLAA 780

Query: 436  AAAAPAAAGP---TAAGPTTAAAGPGPIVRH*AVCWAVADAAAAAAAGA 573
            AAA+ + +G    T  G  + A G G            +++ AAAAA A
Sbjct: 781  AAASNSYSGSGANTNQGQNSNAGGNGG-----------SESKAAAAAQA 818

 Score = 35.8 bits (81), Expect = 0.45
 Identities = 25/77 (32%), Positives = 35/77 (44%)
 Frame = +2

Query: 17  PGPVPLSFLTASGSANSGATGVGAAGAAAGVGLGGHRASSPMDMITAASVAAASAGVVAA 196
           P P+  +  + SGS +      GAAGA AG  L    +S+        S+ ++SAG  AA
Sbjct: 312 PSPLNSNSKSLSGSGSGSGNTNGAAGAGAGSTLS---SSTFAGFSKGGSLVSSSAGAAAA 368

Query: 197 GGLGDGSGGRPSRSDGM 247
              G G  G    + GM
Sbjct: 369 LAAGSGQQGSKFSAGGM 385

 Score = 35.0 bits (79), Expect = 0.76
 Identities = 36/149 (24%), Positives = 52/149 (34%), Gaps = 1/149 (0%)
 Frame = +2

Query: 128  ASSPMDMITAASVAAASAGVVAAGGLGDGSGGRPSRSDGMVNMLQMTPQQVTQQQLMAQM 307
            A +P+  +       + + V+  G L   +G   +         Q  PQ +      A +
Sbjct: 1258 APTPICAVATPGAEQSVSSVLPLGNLPITAGPNSATQQQQPPTQQQQPQLLVPGGSAASL 1317

Query: 308  QQQQSQQMAAAAATSGSGGLGHLAVSYSMDTAFMTSQQQQQQQQQQRLQQQAQQLQAQQQ 487
            QQQQ QQ   A  +  +G  G     +              QQQQ  LQQ A +    + 
Sbjct: 1318 QQQQQQQQPVAGGSITAGISGQALSQHQQQLMGGLPAMLSDQQQQALLQQGALKAGVLR- 1376

Query: 488  QQQAQGPSSGIELSAGLSQMQ-QPQQQQA 571
                 GP  G  L     Q    PQ QQ+
Sbjct: 1377 ----FGPPDGNPLQQQPGQASVNPQTQQS 1401

 Score = 33.5 bits (75), Expect = 2.2
 Identities = 27/80 (33%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
 Frame = +1

Query: 274  AGHPAAADGADAATAVAADGSGGGDKRQRRPGPPGRLLQH-------GYRFYDVPAAAAA 432
            +G+ A      AA   AA G G G    R P P   +  H       GY  Y  P  AA 
Sbjct: 2230 SGNGAVGGVGGAAGNGAAGGGGAGAADSRSPPPQRHVHTHHHTHVGLGYPMYPAPYGAAV 2289

Query: 433  AA---AAAPAAAGPTAAGPT 483
             A   AAA A   P   GP+
Sbjct: 2290 LASQQAAAVAVINPFPPGPS 2309

 Score = 29.3 bits (64), Expect(2) = 0.41
 Identities = 33/131 (25%), Positives = 45/131 (34%)
 Frame = -2

Query: 557  AAAASATAQQTAQCRTMGPGPAAAVVGPAAVGPAAAGAAAAAAAAAAGTS*KRYPCCRRR 378
            A  A   A    +     P   A    P       +GA+ A++A  A             
Sbjct: 1146 AHGAGGGASSMDEDSMQAPEDPATPPSPGVASGTGSGASVASSAVPATAP---------- 1195

Query: 377  PGGPGRRCRLSPPPLPSAATAVAASAPSAAAG*PAAASSAACSPSRLSETAAPRCRHPDR 198
              G G        PL +++  V   APSA A      ++   +PS + ET AP       
Sbjct: 1196 SAGQGTVAVSPNTPLANSSNPVTNVAPSAPATGSVTIAAPNTTPS-VVETQAPL----TG 1250

Query: 197  PPPRRLPRPPP 165
            PPP   P P P
Sbjct: 1251 PPPVTPPAPTP 1261

 Score = 25.4 bits (54), Expect(2) = 0.41
 Identities = 16/43 (37%), Positives = 19/43 (43%), Gaps = 6/43 (13%)
 Frame = -1

Query: 120  PPSPTPAAAPAAP------TPVAPLLALPLAVRKLSGTGPGPP 10
            PP+PTP  A A P      + V PL  LP+     S T    P
Sbjct: 1256 PPAPTPICAVATPGAEQSVSSVLPLGNLPITAGPNSATQQQQP 1298

>ref|NP_524678.2| scribbler CG5580-PA [Drosophila melanogaster]
            gi|7302641|gb|AAF57721.1| CG5580-PA [Drosophila
            melanogaster]
          Length = 2280

 Score = 71.6 bits (174), Expect = 7e-12
 Identities = 51/138 (36%), Positives = 65/138 (46%)
 Frame = +2

Query: 152  TAASVAAASAGVVAAGGLGDGSGGRPSRSDGMVNMLQMTPQQVTQQQLMAQMQQQQSQQM 331
            +AA+ AAA+A   A+GGL    G       GM +  Q   QQ  QQ  +AQ QQQ  QQ 
Sbjct: 1844 SAAAAAAAAAQNAASGGLPPHPGMMHKDEPGMGSAAQQQQQQQQQQMQIAQQQQQAIQQH 1903

Query: 332  AAAAATSGSGGLGHLAVSYSMDTAFMTSQQQQQQQQQQRLQQQAQQLQAQQQQQQAQGPS 511
                         HL   +         Q QQQQQQQQ+ QQQ QQ Q QQ+ +Q+Q  S
Sbjct: 1904 HQ-----------HLQQQHQAQQQQQQQQHQQQQQQQQQQQQQQQQQQQQQKLKQSQAAS 1952

Query: 512  SGIELSAGLSQMQQPQQQ 565
            +G    A       P+Q+
Sbjct: 1953 AGANNKATNLTKDSPKQK 1970

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 43/120 (35%), Positives = 58/120 (47%), Gaps = 15/120 (12%)
 Frame = +2

Query: 260  QMTPQQVTQQQLMAQMQQQQSQQMAAAAATSGSGGLG-HLAVSYSMDTAFMTSQQQQQQQ 436
            Q   +++ +  +    Q   +   AAAA  + SGGL  H  + +  +    ++ QQQQQQ
Sbjct: 1826 QAREEELRRYYMFTGRQNSAAAAAAAAAQNAASGGLPPHPGMMHKDEPGMGSAAQQQQQQ 1885

Query: 437  QQQRLQ-----QQA---------QQLQAQQQQQQAQGPSSGIELSAGLSQMQQPQQQQAL 574
            QQQ++Q     QQA         QQ QAQQQQQQ Q      +      Q QQ QQQQ L
Sbjct: 1886 QQQQMQIAQQQQQAIQQHHQHLQQQHQAQQQQQQQQHQQQQQQQQQQQQQQQQQQQQQKL 1945

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 18/181 (9%)
 Frame = +2

Query: 92   GAAAGVGLGGHRASSPMDMITAASVAAASAGVVAAGGLGDGSG---------GRPSRSDG 244
            G A+G G G   ASS +   TA S    +  V     L + S            P+    
Sbjct: 1142 GVASGTGSGASVASSAVPA-TAPSAGQGTVAVSPNTPLANSSNPVTNGNVAPSAPATGSV 1200

Query: 245  MVNMLQMTPQQVTQQQLMAQMQQQQSQQMAAAAATSGSGG---------LGHLAVSYSMD 397
             +     TP  V  Q  +               A +  G          LG+L ++   +
Sbjct: 1201 TIAAPNTTPSVVETQAPLTGPPPVTPPAPTPICAVATPGAEQSVSSVLPLGNLPLTAGPN 1260

Query: 398  TAFMTSQQQQQQQQQQRLQQQAQQLQAQQQQQQAQGPSSGIELSAGLSQMQQPQQQQALT 577
            +A    Q   QQQQ Q L         QQQQQQ Q P +G  ++AG+S     Q QQ L 
Sbjct: 1261 SATQQQQPPTQQQQPQLLVPGGSAASLQQQQQQQQ-PVAGGSITAGISGQALSQHQQQLM 1319

Query: 578  G 580
            G
Sbjct: 1320 G 1320

 Score = 37.0 bits (84), Expect = 0.20
 Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
 Frame = +1

Query: 256  AADDAAAGHPAAADGADAATAVAADGSGGGDKRQRRPGPPGRLLQHGYRFYDVPAAAAAA 435
            AA    A   AA+  A    + +A G GG       PGPPG+      +     AA  AA
Sbjct: 711  AAASLLAATGAASSSASQMASSSAGGVGGSGGGANAPGPPGKESAGSIKISSHIAAQLAA 770

Query: 436  AAAAPAAAGP---TAAGPTTAAAGPGPIVRH*AVCWAVADAAAAAAAGA 573
            AAA+ + +G    T  G  + A G G            +++ AAAAA A
Sbjct: 771  AAASNSYSGSGANTNQGQNSNAGGNGG-----------SESKAAAAAQA 808

 Score = 35.8 bits (81), Expect = 0.45
 Identities = 25/77 (32%), Positives = 35/77 (44%)
 Frame = +2

Query: 17  PGPVPLSFLTASGSANSGATGVGAAGAAAGVGLGGHRASSPMDMITAASVAAASAGVVAA 196
           P P+  +  + SGS +      GAAGA AG  L    +S+        S+ ++SAG  AA
Sbjct: 302 PSPLNSNSKSLSGSGSGSGNTNGAAGAGAGSTLS---SSTFAGFSKGGSLVSSSAGAAAA 358

Query: 197 GGLGDGSGGRPSRSDGM 247
              G G  G    + GM
Sbjct: 359 LAAGSGQQGSKFSAGGM 375

 Score = 34.7 bits (78), Expect = 1.00
 Identities = 36/149 (24%), Positives = 52/149 (34%), Gaps = 1/149 (0%)
 Frame = +2

Query: 128  ASSPMDMITAASVAAASAGVVAAGGLGDGSGGRPSRSDGMVNMLQMTPQQVTQQQLMAQM 307
            A +P+  +       + + V+  G L   +G   +         Q  PQ +      A +
Sbjct: 1228 APTPICAVATPGAEQSVSSVLPLGNLPLTAGPNSATQQQQPPTQQQQPQLLVPGGSAASL 1287

Query: 308  QQQQSQQMAAAAATSGSGGLGHLAVSYSMDTAFMTSQQQQQQQQQQRLQQQAQQLQAQQQ 487
            QQQQ QQ   A  +  +G  G     +              QQQQ  LQQ A +    + 
Sbjct: 1288 QQQQQQQQPVAGGSITAGISGQALSQHQQQLMGGLPAMLSDQQQQALLQQGALKAGVLR- 1346

Query: 488  QQQAQGPSSGIELSAGLSQMQ-QPQQQQA 571
                 GP  G  L     Q    PQ QQ+
Sbjct: 1347 ----FGPPDGNPLQQQPGQASVNPQTQQS 1371

 Score = 33.5 bits (75), Expect = 2.2
 Identities = 27/80 (33%), Positives = 31/80 (38%), Gaps = 10/80 (12%)
 Frame = +1

Query: 274  AGHPAAADGADAATAVAADGSGGGDKRQRRPGPPGRLLQH-------GYRFYDVPAAAAA 432
            +G+ A      AA   AA G G G    R P P   +  H       GY  Y  P  AA 
Sbjct: 2200 SGNGAVGGVGGAAGNGAAGGGGAGAADSRSPPPQRHVHTHHHTHVGLGYPMYPAPYGAAV 2259

Query: 433  AA---AAAPAAAGPTAAGPT 483
             A   AAA A   P   GP+
Sbjct: 2260 LASQQAAAVAVINPFPPGPS 2279



EST assemble image


clone accession position
1 MXL018c06_r BP094106 1 307
2 MXL091c12_r BP098313 203 582




Chlamydomonas reinhardtii
Kazusa DNA Research Institute