KCC003417A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003417A_C01 KCC003417A_c01
aacaccacaaacaaatacaatctccaccctgcaCACCAACAGCCTCTGTTATCGCTCACT
GGCTCTTCGGCAACTTATCGGTTCAGTCGCTTGAGACGGCAACAGGCCAACGCGTCAAAC
ATGTTCCGCGTTGGCAACCCCTGGGGCTTTGGCGGCCCTGCTGCCTTTGGCGCAAGCCCC
GCTGTTGATGATGATAGGCTCTATTCCAGCATGTTTGGACGGCCAACCCAGCCTCGCGGA
GGCTACCCGGAGGAGCTACTTTACTCTGGATATTACAATCCAGCATACGGGAGGGCTGCC
TACCCTGCAGGCTACCGCCGTGGTGTGCCCATGCCACCTCATCCAATGGACCTGCATGAA
GACCCCTACGCCGCCGCAGCCGCCGCAGCTCAGGCTGCTCGCAAGGCCCCGGCCAGCAGC
GCACCCCCGGCCAGCGCACCCGGCCGCCCGGTATACCATGAGGCGTCCGGCTACGTCCTC
GTGCCCGACGGCATGGGCGGCTACTGCCTGGCTCGTCCCACCGGCCTCCGCACCCCTGCC
TCCGCCATGCCCGTCGCATCGTCCGCTGCGCGCCTGCCGGTTCGTAGGCCAGTGGCCGCG
TCTGAGGAGGACGATGACGAGGCGGAGGAGGATGCGGACGTGATGGACGCCGTCGCTGCC
GCCCGCGCCCGTCGCCTGCAGAAGGAGCAGGCGGCAGCAGCGGCGCTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003417A_C01 KCC003417A_c01
         (708 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00089212.1| COG1858: Cytochrome c peroxidase [Azotobacter...    49  8e-05
gb|EAA39492.1| GLP_26_54603_52153 [Giardia lamblia ATCC 50803]         49  8e-05
ref|ZP_00089789.1| COG1305: Transglutaminase-like enzymes, putat...    48  1e-04
emb|CAD19511.1| UL36 protein [Pseudorabies virus]                      48  1e-04
gb|AAM09808.1| Sec31p [Yarrowia lipolytica]                            47  4e-04

>ref|ZP_00089212.1| COG1858: Cytochrome c peroxidase [Azotobacter vinelandii]
          Length = 674

 Score = 48.9 bits (115), Expect = 8e-05
 Identities = 57/175 (32%), Positives = 68/175 (38%), Gaps = 18/175 (10%)
 Frame = -3

Query: 691 PAPSAGDGRGRQRRRPSRPHPPPPRHRPPQTRPLAYEPA----GAQRTMRRAWRRQGCGG 524
           PAP+      RQ RRP  P  P P  R  + R   + P     GA+    R  RR    G
Sbjct: 6   PAPTDAAVPQRQARRPGLP--PGPARRAQRRRGAVHHPRRDAHGARPVPPRGGRRLSLPG 63

Query: 523 RWDEPGS----SRPCRRARGRSRTPHGIPGGRVRWPGVRC---WPGPCEQPELRRLRRRR 365
            +  P      +R   RA  R R P     GR R PG +     PG C QP   R RR R
Sbjct: 64  PFPHPAELPLRARRASRAVARGRVPPAARRGR-RAPGQQSRGDRPGACRQPPGGRARRDR 122

Query: 364 GLHAGPLDEVAWAHHGGSLQGRQP----SRMLDCNIQSKVAP---PGSLREAGLA 221
              A     VA      +  G +P     R      QS+ AP   PG+L  AG A
Sbjct: 123 AGAAPASRTVARRAGRRAAPGAEPVGADRRPTGAAAQSRRAPATEPGALSAAGRA 177

 Score = 32.3 bits (72), Expect = 7.4
 Identities = 42/115 (36%), Positives = 46/115 (39%), Gaps = 5/115 (4%)
 Frame = +2

Query: 356 MKTPTPPQPPQLRLLARPRPAAHPRPAHPAARYTMRRPATSSCPTAWAATAWLVPPA--- 526
           +  PT    PQ +  AR RP   P PA  A R   RR A    P   A  A  VPP    
Sbjct: 5   LPAPTDAAVPQRQ--AR-RPGLPPGPARRAQR---RRGAVHH-PRRDAHGARPVPPRGGR 57

Query: 527 --SAPLPPPCPSHRPLRACRFVGQWPRLRRTMTRRRRMRT*WTPSLPPAPVACRR 685
             S P P P P+  PLRA R      R R     RR  R     S    P ACR+
Sbjct: 58  RLSLPGPFPHPAELPLRARRASRAVARGRVPPAARRGRRAPGQQSRGDRPGACRQ 112

>gb|EAA39492.1| GLP_26_54603_52153 [Giardia lamblia ATCC 50803]
          Length = 816

 Score = 48.9 bits (115), Expect = 8e-05
 Identities = 71/237 (29%), Positives = 87/237 (35%), Gaps = 37/237 (15%)
 Frame = -3

Query: 694 PPAPSAGDGRGRQRRRPSRPHPPPPRHRPPQT-------RPLAYEPA------------G 572
           P AP  G  RG QR     P PP P  RPP+         P A   A            G
Sbjct: 15  PGAPRPGRPRGAQRAPRPAPDPPGPGRRPPRAPGALGGMLPAAGRLAGPARGRGLRAASG 74

Query: 571 AQRTMRRAWR----------RQGCGGRWDEPGSSRPCRRARGRSRTPHGIPGGRVRWPGV 422
           A R +R   R          R G GG        RP +RA GR+    G PG R R P  
Sbjct: 75  ALRGVRPVLRPRGRPVARPGRVGRGGGLGRLRDGRPRQRAPGRAL---GAPGRR-RPPAG 130

Query: 421 RCWP--GPCEQPELRRLRRRRGLHAGPLDEVAW--AHHGGSLQGRQPSRM-LDCNIQSKV 257
           R  P  G   +   R  RR  G   GP   V       G    GR P R+ +   + ++ 
Sbjct: 131 RRAPVRGDRRRGRPRAPRRGPGGRLGPRAPVCRRPRRAGRGAPGRAPGRVPVRRRVPARP 190

Query: 256 APPGSLREAGLAVQTCWNRAYHHQQRGLRQRQQGRQSPRGCQ---RGTCLTRWPVAV 95
           APP + R    A+           +RG  +   GR  P G +   RG C  R P+ V
Sbjct: 191 APPPAARYRVRAL----------PERGAPRGAPGRHGPPGLRPRGRGACARRRPLPV 237

 Score = 35.8 bits (81), Expect = 0.67
 Identities = 39/121 (32%), Positives = 45/121 (36%), Gaps = 5/121 (4%)
 Frame = -3

Query: 694 PPAPSAGDGRGRQR--RRP---SRPHPPPPRHRPPQTRPLAYEPAGAQRTMRRAWRRQGC 530
           PP    G  RG  R  R P   +RP PPPP     + R  A    GA+R   R   R+  
Sbjct: 355 PPRGRGGAPRGPARLPRAPPPAARPGPPPPGRALVRARAPAARLRGARRGPPRGALRRRP 414

Query: 529 GGRWDEPGSSRPCRRARGRSRTPHGIPGGRVRWPGVRCWPGPCEQPELRRLRRRRGLHAG 350
             R   P   R  RR R  +  P  +  G    PG    PG           RRRG   G
Sbjct: 415 RARPRVPRVLRAPRRDRPVAPRPRPVRRGP---PGAEARPG-----------RRRGRRGG 460

Query: 349 P 347
           P
Sbjct: 461 P 461

 Score = 35.0 bits (79), Expect = 1.1
 Identities = 41/121 (33%), Positives = 46/121 (37%), Gaps = 3/121 (2%)
 Frame = -3

Query: 700 LLPPAPSAGDGRGRQRRRPSRPHPPPPRHRPPQTRPLAYEPAGAQRTMRRAWRRQGCGGR 521
           L PP    G  RG  RR P  P P  P  RP +  PL     GA    RR  RR+ C G 
Sbjct: 301 LSPPPGRRGPPRGDARRGPP-PRPRRP--RPRRRAPLRSARRGAPDARRR--RRRVCRG- 354

Query: 520 WDEPGSSRPCRRARGRSRTPHGIPGGRVRWPGVRCWPGPCEQPELRR---LRRRRGLHAG 350
                   P R   G  R P  +P  R   P  R  P P  +  +R      R RG   G
Sbjct: 355 --------PPRGRGGAPRGPARLP--RAPPPAARPGPPPPGRALVRARAPAARLRGARRG 404

Query: 349 P 347
           P
Sbjct: 405 P 405

 Score = 33.1 bits (74), Expect = 4.3
 Identities = 52/160 (32%), Positives = 59/160 (36%), Gaps = 24/160 (15%)
 Frame = -3

Query: 694 PPAPSA-----GDGRGRQRRRP------------SRPHPPPPRHRPPQTRPLAYEPAGAQ 566
           PPA +A     GD RGR   RP             R  PPP R  PP+       P   +
Sbjct: 265 PPARAAAPGRAGDRRGRPGPRPRVRAPLRPRHADGRLSPPPGRRGPPRGDARRGPPPRPR 324

Query: 565 --RTMRRAWRRQGCGGRWD-EPGSSRPCR-RARGRSRTPHGIPGGRVRWPGVRCWPGPCE 398
             R  RRA  R    G  D      R CR   RGR   P G P    R P     PGP  
Sbjct: 325 RPRPRRRAPLRSARRGAPDARRRRRRVCRGPPRGRGGAPRG-PARLPRAPPPAARPGP-- 381

Query: 397 QPELRRLRRRRGLHAGPLDEVAWAHHG---GSLQGRQPSR 287
            P  R L R R     P   +  A  G   G+L+ R  +R
Sbjct: 382 PPPGRALVRAR----APAARLRGARRGPPRGALRRRPRAR 417

>ref|ZP_00089789.1| COG1305: Transglutaminase-like enzymes, putative cysteine proteases
           [Azotobacter vinelandii]
          Length = 511

 Score = 48.1 bits (113), Expect = 1e-04
 Identities = 58/186 (31%), Positives = 72/186 (38%), Gaps = 3/186 (1%)
 Frame = -3

Query: 697 LPPAPSAGDGRGRQRRRPSRPHPPPPRHRPPQTRPLAYEPAGAQRTMRRAWRRQGCGGRW 518
           LP  P+   G G +R RP R H P PR   P  R     PA ++R  RR   R G   R 
Sbjct: 15  LPRQPTGVHG-GPRRFRPRR-HDPRPRLAVPVDRLPYRAPAVSRREHRRLPARPG---RA 69

Query: 517 DEPGSSRPCRRARGRSRTPHGIPGGRVRWPGVRCWPGPCEQPELRRL--RRRRGLHAGPL 344
              G+    R  + R   PH +PG R   PG R  P    +P  R L   R   L A P 
Sbjct: 70  RPVGAGLAARTGQQRHHLPHPLPGHRATDPGARPAPARRTEPACRALPVARAAQLAAPPR 129

Query: 343 DEVAWAHHGGSLQGRQPSRMLDCNIQSKVAPPGSLREAGLAVQTCW-NRAYHHQQRGLRQ 167
            E+     G       P+R           PPG LR     VQ     R +   +R  R 
Sbjct: 130 REL---RDGPGSGPAGPAR-----------PPGRLRPRASGVQPLRPPRQFRRAERTGRS 175

Query: 166 RQQGRQ 149
             +GR+
Sbjct: 176 AVRGRR 181

>emb|CAD19511.1| UL36 protein [Pseudorabies virus]
          Length = 3084

 Score = 48.1 bits (113), Expect = 1e-04
 Identities = 28/67 (41%), Positives = 35/67 (51%), Gaps = 2/67 (2%)
 Frame = +2

Query: 371  PPQPPQLRLLARPR--PAAHPRPAHPAARYTMRRPATSSCPTAWAATAWLVPPASAPLPP 544
            PPQPP  +  A+PR  P A P P  P+A+ T+ RPA    P   +A   L  P  AP PP
Sbjct: 2362 PPQPPSSQPAAKPRGAPPAPPAPPPPSAQTTLPRPAAPPAPPPPSAQTTL--PRPAPPPP 2419

Query: 545  PCPSHRP 565
              P+  P
Sbjct: 2420 SAPAATP 2426

 Score = 43.5 bits (101), Expect = 0.003
 Identities = 28/59 (47%), Positives = 32/59 (53%)
 Frame = +2

Query: 365  PTPPQPPQLRLLARPRPAAHPRPAHPAARYTMRRPATSSCPTAWAATAWLVPPASAPLP 541
            P PP P     L  PRPAA P P  P+A+ T+ RPA    P+A AAT    PPA  P P
Sbjct: 2382 PAPPPPSAQTTL--PRPAAPPAPPPPSAQTTLPRPAPPP-PSAPAATP--TPPAPGPAP 2435

 Score = 39.7 bits (91), Expect = 0.046
 Identities = 36/115 (31%), Positives = 44/115 (37%), Gaps = 11/115 (9%)
 Frame = +2

Query: 359  KTPTPPQ--PPQLRLLARPRPAAHPRPAHPAARYTMRRPATSSCPTAWAATAWLVPPASA 532
            +TP P Q  PP+  L A    AA      PAA       AT++  ++ +AT    P A  
Sbjct: 2728 ETPAPAQTQPPRSPLAAPTSLAAPSEIERPAASAAAAAAATTTTTSSSSATTSSAPAAPP 2787

Query: 533  PLPPPC---------PSHRPLRACRFVGQWPRLRRTMTRRRRMRT*WTPSLPPAP 670
            P PPP          P  RP       G+ PRL  T            P LPP P
Sbjct: 2788 PAPPPSRPAAPPPAPPPSRPAPTPERHGEPPRLMFT-----------PPPLPPQP 2831

 Score = 35.4 bits (80), Expect = 0.87
 Identities = 40/126 (31%), Positives = 47/126 (36%), Gaps = 20/126 (15%)
 Frame = +2

Query: 365  PTPP---QPPQLRLLARPRPAAHPRPAHPAARYTMRRPATSSCPTAWAATAWLVPPA--- 526
            PTP    +PP+L     P P    +   P A +T   P  S+ P A        PP    
Sbjct: 2809 PTPERHGEPPRLMFTPPPLPPQPSQQRPPEAPWTWPEPRDSAGPPALFTPPPSDPPVQFP 2868

Query: 527  ---SAPLPPPCPSHRPLRACRFVGQWPRLRRTMTRRRRMRT*W---------TPSLPP-- 664
                 PLPPP P  +PL A     + P    T  R    R  W         TP LPP  
Sbjct: 2869 GREEPPLPPP-PPPQPLWASEGEAETP---ATPLRSPLERMPWPPPLEAPGTTPELPPEF 2924

Query: 665  APVACR 682
            AP A R
Sbjct: 2925 APPAPR 2930

 Score = 35.0 bits (79), Expect = 1.1
 Identities = 35/111 (31%), Positives = 42/111 (37%), Gaps = 10/111 (9%)
 Frame = +1

Query: 295  AAYPAGYRRGVPMPPHPMD-----LHEDPYAAAAAAAQAARKAPASSAPPA-----SAPG 444
            AA P    +G P PP P         + P   A AAA  A KA   + PP      +AP 
Sbjct: 2291 AAKPTPQPQGPPPPPQPPSAQAPPAQKPPAQPATAAATTAPKATPQTQPPTRAQTQTAPP 2350

Query: 445  RPVYHEASGYVLVPDGMGGYCLARPTGLRTPASAMPVASSAARLPVRRPVA 597
             P    A+  V  P        A+P G      A P  S+   LP  RP A
Sbjct: 2351 PPSAATAAAQV-PPQPPSSQPAAKPRGAPPAPPAPPPPSAQTTLP--RPAA 2398

 Score = 33.9 bits (76), Expect = 2.5
 Identities = 46/153 (30%), Positives = 57/153 (37%), Gaps = 18/153 (11%)
 Frame = +1

Query: 295  AAYPAGYRRG--VPMPPH-----PMDLHEDPYAAAAAAAQAARKAPASSAPPASAPGRPV 453
            AA P G   G   P PP      P      P AAAAAAA AA  A      P   PG PV
Sbjct: 2638 AAQPEGRPPGGLEPRPPQAQAQAPATAPTGPPAAAAAAATAAVPA------PGVGPGGPV 2691

Query: 454  YHEA-----SGYVLV------PDGMGGYCLARPTGLRTPASAMPVASSAARLPVRRPVAA 600
               A     +G++ +      P  + G  +  P    TPA A          P R P+AA
Sbjct: 2692 RRAAGPRPPAGHLRLHIPPPQPVQLEGVVVPLPASPETPAPAQ-------TQPPRSPLAA 2744

Query: 601  SEEDDDEAEEDADVMDAVAAARARRLQKEQAAA 699
                   +E +     A AAA A       ++A
Sbjct: 2745 PTSLAAPSEIERPAASAAAAAAATTTTTSSSSA 2777

 Score = 33.5 bits (75), Expect = 3.3
 Identities = 35/120 (29%), Positives = 45/120 (37%), Gaps = 16/120 (13%)
 Frame = +2

Query: 365  PTPPQPPQLRLLARPRPAAHPRPAHPAARYTMRRPATSSCPTAWAATAWLVPP------- 523
            P PPQPP     A+  PA  P    PA      +PAT++  TA  AT    PP       
Sbjct: 2302 PPPPQPPS----AQAPPAQKP----PA------QPATAAATTAPKATPQTQPPTRAQTQT 2347

Query: 524  ---------ASAPLPPPCPSHRPLRACRFVGQWPRLRRTMTRRRRMRT*WTPSLPPAPVA 676
                     A+A +PP  PS +P    R     P      + +  +     P  PP P A
Sbjct: 2348 APPPPSAATAAAQVPPQPPSSQPAAKPRGAPPAPPAPPPPSAQTTLPRPAAPPAPPPPSA 2407

>gb|AAM09808.1| Sec31p [Yarrowia lipolytica]
          Length = 1204

 Score = 46.6 bits (109), Expect = 4e-04
 Identities = 47/161 (29%), Positives = 59/161 (36%), Gaps = 4/161 (2%)
 Frame = +1

Query: 133  GNPWGFGGPAAFGASPAVDDDRLYSSMFGRPTQPRGGYPEELLYSGY--YNPAYGRAAYP 306
            G P  +G  AA+GA P V    + S     P  P     +  +      Y PA G    P
Sbjct: 932  GAPSPYGAQAAYGARPPVP--AVVSPPPPNPYAPAHSPAQNNVQPAVNPYAPAPGAVVSP 989

Query: 307  AGYRRGVPMPPHPMDLHEDPYAAAAAAAQAARKAPASSAPPASAPGRPVYHEASGYVLVP 486
                 G+  PP       +PYA           AP + APPAS P  P     +G    P
Sbjct: 990  PPVHAGIVPPPAQRSAPSNPYAP----------APGAGAPPASNPYAPPTGGFTG-APAP 1038

Query: 487  DGMGGYCLARPTGLRTPASAMPVASSAARL--PVRRPVAAS 603
               GGY    P  +  P +  P  S A     P R PV +S
Sbjct: 1039 HAGGGYTAPPPAQVAPPPAGPPRNSVAPPPGGPARNPVPSS 1079



EST assemble image


clone accession position
1 MXL020c10_r BP094265 1 488
2 MXL078e05_r BP097613 34 403
3 MXL008b03_r BP093417 217 708




Chlamydomonas reinhardtii
Kazusa DNA Research Institute