Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003398A_C01 KCC003398A_c01
(288 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK98670.1|AC021893_4 Hypothetical protein [Oryza sativa] gi|... 42 0.002
ref|NP_045322.1| very large virion protein (tegument) [Bovine he... 40 0.009
ref|NP_542612.1| replicase [Grapevine fleck virus] gi|18073602|e... 40 0.012
gb|AAK19368.1| merozoite surface protein 2 [Plasmodium falciparum] 40 0.012
emb|CAC24662.1| ala-pro rich protein [Leishmania major] 40 0.012
>gb|AAK98670.1|AC021893_4 Hypothetical protein [Oryza sativa] gi|31431984|gb|AAP53683.1|
hypothetical protein [Oryza sativa (japonica
cultivar-group)]
Length = 178
Score = 42.4 bits (98), Expect = 0.002
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -1
Query: 222 SRLWRDERRWR*RCARLWLWSLREGRPARRLQRWW 118
SR WR RRWR RC+R W S R R +RR +R W
Sbjct: 88 SRRWRRSRRWRSRCSRRWRRSWRRRRCSRRWRRLW 122
>ref|NP_045322.1| very large virion protein (tegument) [Bovine herpesvirus 1]
gi|1491621|emb|CAB01605.1| UL36 [Bovine herpesvirus 1]
gi|2653311|emb|CAA06097.1| very large virion protein
(tegument) [Bovine herpesvirus type 1.1 (strain Cooper)]
Length = 3247
Score = 40.0 bits (92), Expect = 0.009
Identities = 26/58 (44%), Positives = 29/58 (49%), Gaps = 1/58 (1%)
Frame = +1
Query: 112 LPPPALQSSRRPALT*RPQP*PRAPL-APSTLIAPQPRVRWAPATAMPPPCDMAPASA 282
LPPPAL + PA T P P P PL AP T++ P P AP A P AP A
Sbjct: 2677 LPPPALTPALTPAPTPAPTPAPPLPLPAPITVLVPAPVPAPAPIPAPAPTPAPAPTPA 2734
Score = 39.3 bits (90), Expect = 0.016
Identities = 27/66 (40%), Positives = 32/66 (47%), Gaps = 1/66 (1%)
Frame = +1
Query: 88 VVAPLIAQLPPPALQSSRRPALT*RPQP*PRAPLAPSTLIAPQ-PRVRWAPATAMPPPCD 264
V AP+ A PPPA + P RP P P AP P+ AP+ P AP PPP
Sbjct: 2826 VQAPVDAPAPPPAPERPAPPPAPERPAP-PPAPERPAPPPAPERPAPPPAPERPAPPPAP 2884
Query: 265 MAPASA 282
PA+A
Sbjct: 2885 ERPATA 2890
Score = 30.4 bits (67), Expect = 7.2
Identities = 26/74 (35%), Positives = 33/74 (44%)
Frame = +1
Query: 61 AACSLGSALVVAPLIAQLPPPALQSSRRPALT*RPQP*PRAPLAPSTLIAPQPRVRWAPA 240
A +L + + AP A LP P + P + P P+AP IAP AP
Sbjct: 2986 APSALPAPRLEAPAAASLPAPPIAPPIAPPIAPPIAPPIAPPIAPP--IAPPIAPPIAP- 3042
Query: 241 TAMPPPCDMAPASA 282
AMP P APA+A
Sbjct: 3043 PAMPAPPSAAPATA 3056
Score = 30.0 bits (66), Expect = 9.5
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +1
Query: 115 PPPALQSSRRPALT*RPQP*PRAPLAPSTLIAPQPRVRW-APATAMPPPCDMAPASA 282
PPPA S P + P+ P PL P P P PA +PPP P A
Sbjct: 2603 PPPASLVSAAPPVPPGPRLPPAPPLPPPAPPLPPPAPPLPPPAPPLPPPAPPLPPPA 2659
Score = 30.0 bits (66), Expect = 9.5
Identities = 25/88 (28%), Positives = 37/88 (41%), Gaps = 3/88 (3%)
Frame = +1
Query: 28 SVLPSCIWQALAACSLGSALVVAPLIAQLPPPALQSSRRPALT*RPQP*PRAPLAPSTLI 207
S LP+ +A AA SL + + P+ + PP + P + P P+AP +
Sbjct: 2988 SALPAPRLEAPAAASLPAPPIAPPIAPPIAPP-IAPPIAPPIAPPIAPPIAPPIAPPAMP 3046
Query: 208 AP---QPRVRWAPATAMPPPCDMAPASA 282
AP P + A + PP AP A
Sbjct: 3047 APPSAAPATAGSSAPPIAPPATPAPLIA 3074
>ref|NP_542612.1| replicase [Grapevine fleck virus] gi|18073602|emb|CAC84400.1|
replicase [Grapevine fleck virus]
Length = 1949
Score = 39.7 bits (91), Expect = 0.012
Identities = 24/58 (41%), Positives = 29/58 (49%), Gaps = 1/58 (1%)
Frame = +1
Query: 115 PPPALQSSRRPALT*RPQP*PRAPLA-PSTLIAPQPRVRWAPATAMPPPCDMAPASAF 285
PPPA + PALT P P PL PS + +P AP TA P P +AP+ F
Sbjct: 727 PPPATSPASTPALTPIPAPKTAPPLTFPSPTLVAEPD---APVTARPSPLPLAPSRPF 781
Score = 33.9 bits (76), Expect = 0.66
Identities = 20/54 (37%), Positives = 27/54 (49%)
Frame = +1
Query: 118 PPALQSSRRPALT*RPQP*PRAPLAPSTLIAPQPRVRWAPATAMPPPCDMAPAS 279
PPA +P PQP P PL P+++ +P PR + PPP +PAS
Sbjct: 688 PPAPPLPPQPPPPPPPQPSPHPPLFPASIPSPPPR------PSSPPPPATSPAS 735
>gb|AAK19368.1| merozoite surface protein 2 [Plasmodium falciparum]
Length = 143
Score = 39.7 bits (91), Expect = 0.012
Identities = 32/81 (39%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = -2
Query: 284 NADAGAMSHG--GGMAVAGAQRTRGCGAMSVDGARGARGYGCGRYVRAGLRDD--CSAGG 117
N AGA + G G A AGA + G GA GA G+ G G G AG D SAG
Sbjct: 18 NPSAGAGASGSAGAGAGAGASGSAGAGA----GASGSAGSGDGAVASAGSGDGAVASAGS 73
Query: 116 GSWAMRGATTNALPSEHAARA 54
G A+ A+ A P A R+
Sbjct: 74 GDGAVASASNGANPGADAKRS 94
Score = 36.2 bits (82), Expect = 0.13
Identities = 29/80 (36%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Frame = -2
Query: 284 NADAGAMSHGGGMAVAGAQRTRGCGAM------SVDGARGARGYGCGRYVRAGLRDDCSA 123
+A AGA G A AGA + G GA S DGA + G G G AG D A
Sbjct: 20 SAGAGASGSAGAGAGAGASGSAGAGAGASGSAGSGDGAVASAGSGDGAVASAGSGDGAVA 79
Query: 122 GGGSWAMRGATTNALPSEHA 63
+ A GA PS A
Sbjct: 80 SASNGANPGADAKRSPSTPA 99
>emb|CAC24662.1| ala-pro rich protein [Leishmania major]
Length = 356
Score = 39.7 bits (91), Expect = 0.012
Identities = 23/65 (35%), Positives = 32/65 (48%)
Frame = +1
Query: 94 APLIAQLPPPALQSSRRPALT*RPQP*PRAPLAPSTLIAPQPRVRWAPATAMPPPCDMAP 273
A + A PPP S A+ P P AP AP++++AP P ++ AP PPP
Sbjct: 76 AAVSAAAPPPPPPPS---AIAAAPLPPEAAPPAPTSVVAPPPPMQAAPGVTAPPPVQPIS 132
Query: 274 ASAFR 288
A+R
Sbjct: 133 VEAWR 137
