KCC003387A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003387A_C01 KCC003387A_c01
gcggcctcaaggcgatcaccaacaaggagatcgacgacgccattgaccgcatcgtggctg
gcctggagggcaagccgctgGTGGACGGCAAGGCCAAGGCGCTGGTGGCCTACCACGAGG
TCGGCCACGCCATCTGCGGCACCCTGCAGCCCGGCCACGACCCCGTGCAGAAGGTGACTC
TGGTGCCCCGCGGCCAGGCGCGCGGCCTCACCTGGTTCATCCCTGGTGAGGACCCCACCC
TGGTGTCCAAGAGCCAGATCTTCGCGCGCATCGTTGGCGCGCTGGGCGGCCGCGCCGCCG
AGGAGCTGGTGTTTGGCGAGGACGAGGTGACGTCGGGCGCCGCCAGCGACCTGCAGCAGG
TGTCTGGCATGGCCCGCCAGATGGTGATCAACTACGGCATGTCCAACATCGGCCCCTGGA
GCCTGATGGACCCCTCGGCCATGTCGGGCGACATGATCATGCGCATGATGAGCCGCAACT
CGATGTCGGAGAGCCTGCAGCAGCGCATTGACAGCCAGGTGCGCACCATCGCCGACCAGG
CCTACGAGGTGGCGCTGCGGCACATCGCCGACAACCGTGAGGCCATTGACCGCATCGTGG
AGGCGCTGATGGAGAAGGAGACCCTGACCGGCGACGAGTTCCGCGCCATGCTGGCCGAGT
ACACCACCATCCCCGAGGAGAACGTCAAGGCCGTGGAGGCGCAGCGCAAGGGCGGCGCCG
AGCTGGTGGCCGCCGCCACCCGCATGGAGCTCTAAGCAGCTGCTACCGCTGCGGTGGGGC
TGGCCTTTGCCTGGCTTGGCGCGGCTAGGTTTGGCTGGGCTAGGCAGGGGCTGGGCGGGA
GCTCTTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003387A_C01 KCC003387A_c01
         (847 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAD17230.1| FtsH-like protein Pftf precursor [Nicotiana tabacum]   343  2e-93
emb|CAA09935.1| chloroplast protease [Capsicum annuum]                337  1e-91
gb|AAK76625.2| putative FtsH protease [Arabidopsis thaliana]          334  1e-90
gb|AAL31897.1|AF419565_1 At1g06430/F12K11_24 [Arabidopsis thalia...   334  1e-90
gb|AAK73957.1| At2g30950/F7F1.16 [Arabidopsis thaliana] gi|20147...   333  2e-90

>gb|AAD17230.1| FtsH-like protein Pftf precursor [Nicotiana tabacum]
          Length = 693

 Score =  343 bits (881), Expect = 2e-93
 Identities = 162/227 (71%), Positives = 197/227 (86%)
 Frame = +3

Query: 3    GLKAITNKEIDDAIDRIVAGLEGKPLVDGKAKALVAYHEVGHAICGTLQPGHDPVQKVTL 182
            G  AI +KEIDD+IDRIVAG+EG  + DGK+K+LVAYHEVGHAICGTL PGHD VQKVTL
Sbjct: 455  GKTAIASKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTL 514

Query: 183  VPRGQARGLTWFIPGEDPTLVSKSQIFARIVGALGGRAAEELVFGEDEVTSGAASDLQQV 362
            +PRGQA+GLTWFIP +DPTL+SK Q+FARIVG LGGRAAEE++FGE EVT+GAA DLQQ+
Sbjct: 515  IPRGQAKGLTWFIPADDPTLISKQQLFARIVGGLGGRAAEEVIFGEPEVTTGAAGDLQQI 574

Query: 363  SGMARQMVINYGMSNIGPWSLMDPSAMSGDMIMRMMSRNSMSESLQQRIDSQVRTIADQA 542
            +G+A+QMV+ +GMS +GPWSLMD SA SGD+IMRMM+RNSMSE L + ID  V+ ++D A
Sbjct: 575  TGLAKQMVVTFGMSELGPWSLMDSSAQSGDVIMRMMARNSMSEKLAEDIDGAVKRLSDSA 634

Query: 543  YEVALRHIADNREAIDRIVEALMEKETLTGDEFRAMLAEYTTIPEEN 683
            YE+AL HI +NREAID+IVE L+EKET+TGDEFRA+L+E+  IP EN
Sbjct: 635  YEIALTHIRNNREAIDKIVEVLLEKETMTGDEFRAILSEFVEIPAEN 681

>emb|CAA09935.1| chloroplast protease [Capsicum annuum]
          Length = 693

 Score =  337 bits (865), Expect = 1e-91
 Identities = 159/227 (70%), Positives = 195/227 (85%)
 Frame = +3

Query: 3    GLKAITNKEIDDAIDRIVAGLEGKPLVDGKAKALVAYHEVGHAICGTLQPGHDPVQKVTL 182
            G  AI +KEIDD+IDRIVAG+EG  + DGK+K+LVAYHEVGHAICGTL PGHDPVQKVTL
Sbjct: 455  GKTAIASKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTL 514

Query: 183  VPRGQARGLTWFIPGEDPTLVSKSQIFARIVGALGGRAAEELVFGEDEVTSGAASDLQQV 362
            +PRGQA+GLTWFIP +DPTL+SK Q+FARIVG LGGRAAEE++FG  EVT+GAA DLQQ+
Sbjct: 515  IPRGQAKGLTWFIPADDPTLISKQQLFARIVGGLGGRAAEEVIFGAPEVTTGAAGDLQQI 574

Query: 363  SGMARQMVINYGMSNIGPWSLMDPSAMSGDMIMRMMSRNSMSESLQQRIDSQVRTIADQA 542
            + +A+QMV+ +GMS +GPWSLMD SA SGD+IMRMM+RNSMSE L + ID+ V+ ++D A
Sbjct: 575  TSLAKQMVVTFGMSELGPWSLMDASAQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDSA 634

Query: 543  YEVALRHIADNREAIDRIVEALMEKETLTGDEFRAMLAEYTTIPEEN 683
            YE+AL  I  NREAID+IVE L+E+ET+TGDEFRA+L+E+  IP EN
Sbjct: 635  YEIALSQIRSNREAIDKIVEVLLEQETMTGDEFRAILSEFVEIPAEN 681

>gb|AAK76625.2| putative FtsH protease [Arabidopsis thaliana]
          Length = 501

 Score =  334 bits (856), Expect = 1e-90
 Identities = 161/227 (70%), Positives = 197/227 (85%)
 Frame = +3

Query: 3   GLKAITNKEIDDAIDRIVAGLEGKPLVDGKAKALVAYHEVGHAICGTLQPGHDPVQKVTL 182
           G  AI++KEIDD+IDRIVAG+EG  + DGK+K+LVAYHEVGHAICGTL PGHD VQKVTL
Sbjct: 260 GKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTL 319

Query: 183 VPRGQARGLTWFIPGEDPTLVSKSQIFARIVGALGGRAAEELVFGEDEVTSGAASDLQQV 362
           +PRGQARGLTWFIP +DPTL+SK Q+FARIVG LGGRAAEE++FGE EVT+GA SDLQQ+
Sbjct: 320 IPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTGAVSDLQQI 379

Query: 363 SGMARQMVINYGMSNIGPWSLMDPSAMSGDMIMRMMSRNSMSESLQQRIDSQVRTIADQA 542
           +G+A+QMV  +GMS IGPWSLMD S  S D+IMRMM+RNSMSE L   ID+ V+T++D+A
Sbjct: 380 TGLAKQMVTTFGMSEIGPWSLMDSSEQS-DVIMRMMARNSMSEKLANDIDTAVKTLSDKA 438

Query: 543 YEVALRHIADNREAIDRIVEALMEKETLTGDEFRAMLAEYTTIPEEN 683
           YE+AL  I +NREA+D+IVE L+EKET++GDEFRA+L+E+T IP EN
Sbjct: 439 YEIALSQIRNNREAMDKIVEILLEKETMSGDEFRAILSEFTEIPPEN 485

>gb|AAL31897.1|AF419565_1 At1g06430/F12K11_24 [Arabidopsis thaliana] gi|27363292|gb|AAO11565.1|
            At1g06430/F12K11_24 [Arabidopsis thaliana]
            gi|28392858|gb|AAO41866.1| putative FtsH protease
            [Arabidopsis thaliana]
          Length = 685

 Score =  334 bits (856), Expect = 1e-90
 Identities = 161/227 (70%), Positives = 197/227 (85%)
 Frame = +3

Query: 3    GLKAITNKEIDDAIDRIVAGLEGKPLVDGKAKALVAYHEVGHAICGTLQPGHDPVQKVTL 182
            G  AI++KEIDD+IDRIVAG+EG  + DGK+K+LVAYHEVGHAICGTL PGHD VQKVTL
Sbjct: 444  GKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTL 503

Query: 183  VPRGQARGLTWFIPGEDPTLVSKSQIFARIVGALGGRAAEELVFGEDEVTSGAASDLQQV 362
            +PRGQARGLTWFIP +DPTL+SK Q+FARIVG LGGRAAEE++FGE EVT+GA SDLQQ+
Sbjct: 504  IPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTGAVSDLQQI 563

Query: 363  SGMARQMVINYGMSNIGPWSLMDPSAMSGDMIMRMMSRNSMSESLQQRIDSQVRTIADQA 542
            +G+A+QMV  +GMS IGPWSLMD S  S D+IMRMM+RNSMSE L   ID+ V+T++D+A
Sbjct: 564  TGLAKQMVTTFGMSEIGPWSLMDSSEQS-DVIMRMMARNSMSEKLANDIDTAVKTLSDKA 622

Query: 543  YEVALRHIADNREAIDRIVEALMEKETLTGDEFRAMLAEYTTIPEEN 683
            YE+AL  I +NREA+D+IVE L+EKET++GDEFRA+L+E+T IP EN
Sbjct: 623  YEIALSQIRNNREAMDKIVEILLEKETMSGDEFRAILSEFTEIPPEN 669

>gb|AAK73957.1| At2g30950/F7F1.16 [Arabidopsis thaliana] gi|20147395|gb|AAM10407.1|
           At2g30950/F7F1.16 [Arabidopsis thaliana]
          Length = 339

 Score =  333 bits (854), Expect = 2e-90
 Identities = 158/224 (70%), Positives = 196/224 (86%)
 Frame = +3

Query: 12  AITNKEIDDAIDRIVAGLEGKPLVDGKAKALVAYHEVGHAICGTLQPGHDPVQKVTLVPR 191
           +I++KEIDD+IDRIVAG+EG  + DGK+K+LVAYHEVGHA+CGTL PGHD VQKVTL+PR
Sbjct: 98  SISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAVCGTLTPGHDAVQKVTLIPR 157

Query: 192 GQARGLTWFIPGEDPTLVSKSQIFARIVGALGGRAAEELVFGEDEVTSGAASDLQQVSGM 371
           GQARGLTWFIP +DPTL+SK Q+FARIVG LGGRAAEE++FG+ EVT+GA  DLQQ++G+
Sbjct: 158 GQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQQITGL 217

Query: 372 ARQMVINYGMSNIGPWSLMDPSAMSGDMIMRMMSRNSMSESLQQRIDSQVRTIADQAYEV 551
           ARQMV  +GMS+IGPWSLMD SA S D+IMRMM+RNSMSE L + IDS V+ ++D AYE+
Sbjct: 218 ARQMVTTFGMSDIGPWSLMDSSAQS-DVIMRMMARNSMSEKLAEDIDSAVKKLSDSAYEI 276

Query: 552 ALRHIADNREAIDRIVEALMEKETLTGDEFRAMLAEYTTIPEEN 683
           AL HI +NREA+D++VE L+EKET+ GDEFRA+L+E+T IP EN
Sbjct: 277 ALSHIKNNREAMDKLVEVLLEKETIGGDEFRAILSEFTEIPPEN 320



EST assemble image


clone accession position
1 MX052e03_r BP088133 1 492
2 MX054d08_r BP088221 123 477
3 MXL088g08_r BP098178 356 847




Chlamydomonas reinhardtii
Kazusa DNA Research Institute