Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003385A_C01 KCC003385A_c01
(442 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA03515.1| KIAA0023 [Homo sapiens] 39 0.021
pir||S57329 tuberous sclerosis 2 homolog - rat gi|994784|dbj|BAA... 38 0.036
ref|NP_036812.2| tuberous sclerosis 2; Tuberous sclerosis 2 (ren... 38 0.036
ref|ZP_00091967.1| COG0415: Deoxyribodipyrimidine photolyase [Az... 37 0.047
sp|P35824|SLAP_BACCI S-LAYER RELATED PROTEIN PRECURSOR gi|747435... 35 0.18
>dbj|BAA03515.1| KIAA0023 [Homo sapiens]
Length = 2093
Score = 38.5 bits (88), Expect = 0.021
Identities = 40/130 (30%), Positives = 60/130 (45%), Gaps = 19/130 (14%)
Frame = +1
Query: 10 LSASQAPAPSALLLLFALSRP--NTLPESTWVKQLPLFTPILEA--------------PL 141
+SA QA A +AL A P NTL EST +K +P + E P+
Sbjct: 1075 ISAPQAAAAAALRRQMASQAPAVNTLTEST-LKNVPQVVNVQELKNNPATPSTAKTPHPV 1133
Query: 142 RRPFSALAARRPRV--RLATSAFVVANGEHATGGKPAASAPIEIQ-PSSPWSSASNKKPL 312
P +A A++ + L S A+G+ ++G K + +A IE S+P +S KP
Sbjct: 1134 LTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASGTAKIETAVTSTPSASGQFSKPF 1193
Query: 313 ALSPRGQLFS 342
+ SP G F+
Sbjct: 1194 SFSPSGTGFN 1203
>pir||S57329 tuberous sclerosis 2 homolog - rat gi|994784|dbj|BAA08914.1| tuberin
[Rattus norvegicus]
Length = 1809
Score = 37.7 bits (86), Expect = 0.036
Identities = 19/53 (35%), Positives = 25/53 (46%)
Frame = +1
Query: 208 VANGEHATGGKPAASAPIEIQPSSPWSSASNKKPLALSPRGQLFSDRYAERIG 366
+ +GE AT P + I + P P S+S + P L PRG SD R G
Sbjct: 1424 ILDGEAATWSAPGEESRITVPPEGPLPSSSPRSPSGLRPRGYTISDSAPSRRG 1476
>ref|NP_036812.2| tuberous sclerosis 2; Tuberous sclerosis 2 (renal carcinoma);
Tuberous sclerosis 2, (renal carcinoma) [Rattus
norvegicus] gi|1717800|sp|P49816|TSC2_RAT Tuberin
(Tuberous sclerosis 2 homolog protein)
gi|1061325|gb|AAC52289.1| tuberous sclerosis 2 homolog
Length = 1809
Score = 37.7 bits (86), Expect = 0.036
Identities = 19/53 (35%), Positives = 25/53 (46%)
Frame = +1
Query: 208 VANGEHATGGKPAASAPIEIQPSSPWSSASNKKPLALSPRGQLFSDRYAERIG 366
+ +GE AT P + I + P P S+S + P L PRG SD R G
Sbjct: 1424 ILDGEAATWSAPGEESRITVPPEGPLPSSSPRSPSGLRPRGYTISDSAPSRRG 1476
>ref|ZP_00091967.1| COG0415: Deoxyribodipyrimidine photolyase [Azotobacter vinelandii]
Length = 574
Score = 37.4 bits (85), Expect = 0.047
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = -3
Query: 257 GAEAAGF--PPVACSPLATTNALVANRTLGRRAASAEKGRRSGASRIGVNSGSCLTHVDS 84
GA A+G P AC P A A+ R G R + RRSG R N+G+ +
Sbjct: 29 GAAASGTVRPAAACRPAADRGAVAPARKPGPRQCFSAVARRSGDGRTAGNAGAA-----A 83
Query: 83 GSVLGRERAKSSKRAEGAGAWEAER 9
V GRE A+ + GA A R
Sbjct: 84 RPVAGREPARRTAAPAGAARESAMR 108
>sp|P35824|SLAP_BACCI S-LAYER RELATED PROTEIN PRECURSOR gi|7474353|pir||T17884 S-layer
protein - Bacillus circulans gi|304143|gb|AAA62588.1|
S-layer protein
Length = 1616
Score = 35.4 bits (80), Expect = 0.18
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = -1
Query: 436 RLRGKQPRHRP*--TGRPRRTRHRWSQSARRSGQRTAGRAG*APAASCWKRWTTATTAG- 266
RLR +P++R +GRP RWS + + A P A +R +AT AG
Sbjct: 1377 RLRKLRPKNRKLAGSGRPLTAPRRWSWTRPPECSASCPPASNRPGAR--RRPLSATEAGG 1434
Query: 265 -SRWAPKPRASPRLH 224
+RW+P ASP LH
Sbjct: 1435 PTRWSPPRSASPTLH 1449
