KCC003382A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003382A_C01 KCC003382A_c01
ccgccggcctgaccggcctggtcctgtcgcccgtgaccgcgctggcctcggtttgggacc
tgaagagcgtggccgacctgGCCAACACCAACAAGGACTACCTGCGCCTGTTGGGCGTGC
CCGTCAACGCCTCCGCCTACGGCACCGCTGTCCAGCTGCTGGCCTACGACTACTACGTCA
AGGGCTTTGTGGCGCTGGAGACGCCAGCCGTGGCGGTGCTGAACGTGGAGGGCATGGTGG
CCGCCAACCTGCTCATGTACACCAAGTTCTTTGACGGCCTGAACGCCTCCGTGGCCGGCC
GCGACATCACCGCCGCACAGGCCCTGGCCGCGGGTCAGTACGCACTGGCGGCCGTCCTGG
AGGACAGCACCGCGCCCATCAACACCACCGACCCCGCCAGCATCCTGGCGCTGCTCAACG
TCACCTATAGCATCCTCACCGCCAACGCCACCAGCGCCGCCGGCCGCCGCCTGCTGCAGA
CGGCGCCCGCCCCGTTCACCCAGCTGCAGGCGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003382A_C01 KCC003382A_c01
         (513 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO25118.1| flagella membrane glycoprotein 1B [Chlamydomonas ...   317  4e-86
gb|AAO25117.1| flagella membrane glycoprotein 1A [Chlamydomonas ...   315  2e-85
pir||S28264 hydroxyproline-rich glycoprotein - maize gi|22333|em...    61  7e-09
ref|ZP_00009817.1| COG2885: Outer membrane protein and related p...    59  4e-08
gb|AAA59875.1| mucin                                                   59  4e-08

>gb|AAO25118.1| flagella membrane glycoprotein 1B [Chlamydomonas reinhardtii]
          Length = 2213

 Score =  317 bits (813), Expect = 4e-86
 Identities = 166/170 (97%), Positives = 167/170 (97%)
 Frame = +3

Query: 3    AGLTGLVLSPVTALASVWDLKSVADLANTNKDYLRLLGVPVNASAYGTAVQLLAYDYYVK 182
            AGLTGLVLSPVTALASVWDLKSVADLANTNKDYLRL GVPVNASAYGTAVQLLAYDYYVK
Sbjct: 1887 AGLTGLVLSPVTALASVWDLKSVADLANTNKDYLRLFGVPVNASAYGTAVQLLAYDYYVK 1946

Query: 183  GFVALETPAVAVLNVEGMVAANLLMYTKFFDGLNASVAGRDITAAQALAAGQYALAAVLE 362
            GFVALETPAVAVLNVEGMVAANLLMYTKFFDGLN SVAGRDITAAQALAAGQYALAAVLE
Sbjct: 1947 GFVALETPAVAVLNVEGMVAANLLMYTKFFDGLNTSVAGRDITAAQALAAGQYALAAVLE 2006

Query: 363  DSTAPINTTDPASILALLNVTYSILTANATSAAGRRLLQTAPAPFTQLQA 512
            DS APINTTDPASILALLNVTYS+LTANATSAAGRRLLQTAPAPFTQLQA
Sbjct: 2007 DSIAPINTTDPASILALLNVTYSVLTANATSAAGRRLLQTAPAPFTQLQA 2056

>gb|AAO25117.1| flagella membrane glycoprotein 1A [Chlamydomonas reinhardtii]
          Length = 3873

 Score =  315 bits (807), Expect = 2e-85
 Identities = 167/170 (98%), Positives = 169/170 (99%)
 Frame = +3

Query: 3    AGLTGLVLSPVTALASVWDLKSVADLANTNKDYLRLLGVPVNASAYGTAVQLLAYDYYVK 182
            AGLTGLVLSPVTALASVWDLKSVADLANTNKDYLRLLGVPVNASAYGTAVQLLAYDYYVK
Sbjct: 3548 AGLTGLVLSPVTALASVWDLKSVADLANTNKDYLRLLGVPVNASAYGTAVQLLAYDYYVK 3607

Query: 183  GFVALETPAVAVLNVEGMVAANLLMYTKFFDGLNASVAGRDITAAQALAAGQYALAAVLE 362
            GFVALETPAVAVLNVEGMVAANLLMYTKFFDGLNASVAGRDITAAQALAAGQYALAAVLE
Sbjct: 3608 GFVALETPAVAVLNVEGMVAANLLMYTKFFDGLNASVAGRDITAAQALAAGQYALAAVLE 3667

Query: 363  DSTAPINTTDPASILALLNVTYSILTANATSAAGRRLLQTAPAPFTQLQA 512
            DS+APINTTDPASILALLNVTYS+LTANATS AGRRLLQTAPAPFTQLQA
Sbjct: 3668 DSSAPINTTDPASILALLNVTYSVLTANATS-AGRRLLQTAPAPFTQLQA 3716

 Score = 32.3 bits (72), Expect = 3.6
 Identities = 24/70 (34%), Positives = 28/70 (39%)
 Frame = +1

Query: 298  AATSPPHRPWPRVSTHWRPSWRTAPRPSTPPTPPASWRCSTSPIASSPPTPPAPPAAACC 477
            +AT P + P        RPS      PS PP+PP S      P  S PP+PP   A    
Sbjct: 3440 SATGPAYVP--------RPSPALITVPSPPPSPPPS------PAPSPPPSPPLSTANYSA 3485

Query: 478  RRRPPRSPSC 507
            R       SC
Sbjct: 3486 RGLATGPLSC 3495

>pir||S28264 hydroxyproline-rich glycoprotein - maize gi|22333|emb|CAA44844.1|
           hydroxyproline-rich glycoprotein [Zea mays]
           gi|228936|prf||1814452A Hyp-rich glycoprotein
          Length = 303

 Score = 61.2 bits (147), Expect = 7e-09
 Identities = 45/145 (31%), Positives = 60/145 (41%), Gaps = 4/145 (2%)
 Frame = +1

Query: 82  PTPTRTTCACWACPSTPPPTAPLSSCWPTTTTSRALWRWRRQPWRC*TWRAWWPPTCSCT 261
           PTPT  T      P TP PT P  +  P    ++                   PPT   T
Sbjct: 127 PTPTPPTYTPSPKPPTPKPTPPTYTPSPKPPATK-------------------PPTPKPT 167

Query: 262 PSSLT-A*TPPWPAATSPPHRPWPRVSTH--WRPSWRTAPRPSTPPTPPASWRCSTSPIA 432
           P + T +  PP P  T P + P P+  T     P++  +P+P TP   P ++  S  P A
Sbjct: 168 PPTYTPSPKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPA 227

Query: 433 SSPPTP-PAPPAAACCRRRPPRSPS 504
           + PPTP P PP      + P   PS
Sbjct: 228 TKPPTPKPTPPTYTPSPKPPTPKPS 252

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 42/143 (29%), Positives = 57/143 (39%), Gaps = 3/143 (2%)
 Frame = +1

Query: 73  PTWPTPTRTTCACWACPSTPPPTAPLSSCWPTTTTSRALWRWRRQPWRC*TWRAWWPPTC 252
           P  P PT  T      P TP PT P  +  P   T +                   PPT 
Sbjct: 177 PPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPTPKPT-----------------PPTY 219

Query: 253 SCTPSSLTA*TPPWPAATSPPHRPWPRVSTHWR--PSWRTAPRPSTPPTPPASWRCSTSP 426
           + +P    A  PP P  T P + P P+  T     P++  +P+P TP   P ++  +  P
Sbjct: 220 TPSPKP-PATKPPTPKPTPPTYTPSPKPPTPKPSPPTYTPSPKPPTPKPTPPTYTPTPKP 278

Query: 427 IASSPPT-PPAPPAAACCRRRPP 492
            A+ PPT  P PP +      PP
Sbjct: 279 PATKPPTYTPTPPVSHTPSPPPP 301

 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 17/105 (16%)
 Frame = +1

Query: 241 PPTCSCTPSSLTA*TPPWPAATSPPHRPWPRVSTHWRPSWRTAPRPSTPPTPPASWRCST 420
           PPT + TP      TPP       PH+P P+  T   P++  +P+P TP   P ++  S 
Sbjct: 96  PPTYTPTPPPTPKPTPPTYTPAPTPHKPTPK-PTPTPPTYTPSPKPPTPKPTPPTYTPSP 154

Query: 421 SPIASSPPT----------------P-PAPPAAACCRRRPPRSPS 504
            P A+ PPT                P P PP      + P   P+
Sbjct: 155 KPPATKPPTPKPTPPTYTPSPKPPTPKPTPPTYTPSPKPPTPKPT 199

 Score = 35.0 bits (79), Expect = 0.56
 Identities = 24/91 (26%), Positives = 34/91 (36%)
 Frame = +1

Query: 238 WPPTCSCTPSSLTA*TPPWPAATSPPHRPWPRVSTHWRPSWRTAPRPSTPPTPPASWRCS 417
           + P+   TP + T   PP P  T P + P P           T  +P+  PTP       
Sbjct: 88  YTPSPKPTPPTYTPTPPPTPKPTPPTYTPAP-----------TPHKPTPKPTP------- 129

Query: 418 TSPIASSPPTPPAPPAAACCRRRPPRSPSCR 510
           T P  +  P PP P          P+ P+ +
Sbjct: 130 TPPTYTPSPKPPTPKPTPPTYTPSPKPPATK 160

>ref|ZP_00009817.1| COG2885: Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins
           [Rhodopseudomonas palustris]
          Length = 689

 Score = 58.9 bits (141), Expect = 4e-08
 Identities = 49/164 (29%), Positives = 61/164 (36%)
 Frame = +1

Query: 1   PPA*PAWSCRP*PRWPRFGT*RAWPTWPTPTRTTCACWACPSTPPPTAPLSSCWPTTTTS 180
           PP  P    RP P  P+     A P+ P P          P  PPP  P ++  P     
Sbjct: 56  PPPGP----RPAPAPPK-----AAPSAPPPPPAAAPPHVAPPPPPPAPPRAAPPPP---- 102

Query: 181 RALWRWRRQPWRC*TWRAWWPPTCSCTPSSLTA*TPPWPAATSPPHRPWPRVSTHWRPSW 360
                               PP  +  P+   A  PP P    P H   P    H  P  
Sbjct: 103 --------------------PPAAAPAPAPKRAEPPPPPP---PSHSAPPPPPPHAAPPP 139

Query: 361 RTAPRPSTPPTPPASWRCSTSPIASSPPTPPAPPAAACCRRRPP 492
             AP+PS PPT   + R +  P A++P  PPAPPA    +RR P
Sbjct: 140 PPAPKPSAPPTAAPAERPAAPPPAAAPVRPPAPPAGEAPQRRGP 183

 Score = 40.4 bits (93), Expect = 0.013
 Identities = 29/95 (30%), Positives = 35/95 (36%), Gaps = 8/95 (8%)
 Frame = +1

Query: 241 PPTCSCTPSSLTA*TPPWPAATSPPHRPWPRVSTHWRPSWRTAPRPST----PPTPPASW 408
           PP  +  P       PP P   +PP  P         P+   AP P      PP PP+  
Sbjct: 76  PPPAAAPPHVAPPPPPPAPPRAAPPPPP---------PAAAPAPAPKRAEPPPPPPPSHS 126

Query: 409 RCSTSPIASSPPTPPAP----PAAACCRRRPPRSP 501
                P  ++PP PPAP    P  A    RP   P
Sbjct: 127 APPPPPPHAAPPPPPAPKPSAPPTAAPAERPAAPP 161

 Score = 39.7 bits (91), Expect = 0.023
 Identities = 27/85 (31%), Positives = 37/85 (42%)
 Frame = +1

Query: 244 PTCSCTPSSLTA*TPPWPAATSPPHRPWPRVSTHWRPSWRTAPRPSTPPTPPASWRCSTS 423
           P  +  P       PP P A +PPH   P       P     PR + PP PPA+   + +
Sbjct: 60  PRPAPAPPKAAPSAPPPPPAAAPPHVAPP-------PPPPAPPRAAPPPPPPAA-APAPA 111

Query: 424 PIASSPPTPPAPPAAACCRRRPPRS 498
           P  + PP PP PP+ +     PP +
Sbjct: 112 PKRAEPP-PPPPPSHSAPPPPPPHA 135

 Score = 38.9 bits (89), Expect = 0.039
 Identities = 34/117 (29%), Positives = 40/117 (34%), Gaps = 30/117 (25%)
 Frame = +1

Query: 241 PPTCSCTPSSLTA*TP-----PWPAATSPPHRPWPRVSTHWRPSWRTAPRPST-----PP 390
           PP  +  P    A TP     P  A TSP +   P V+   RPS    P+P       PP
Sbjct: 248 PPPAAANPPPAAAPTPAPSAAPQAAPTSPANPSGPAVAPVARPSGERGPQPGAPAGGPPP 307

Query: 391 TPPASWRCSTSPIASSPP--------------------TPPAPPAAACCRRRPPRSP 501
            P A      +  A +PP                     PPAPP  A     PP  P
Sbjct: 308 RPQAGPGAPGAGPAVAPPPGQPQPVPPQPGQPPAGPAVAPPAPPPPAVTAPIPPAPP 364

 Score = 37.7 bits (86), Expect = 0.086
 Identities = 24/55 (43%), Positives = 26/55 (46%), Gaps = 5/55 (9%)
 Frame = +1

Query: 352 PSWRTAPRP-----STPPTPPASWRCSTSPIASSPPTPPAPPAAACCRRRPPRSP 501
           P  R AP P     S PP PPA+      P  + PP PPAPP AA     PP  P
Sbjct: 58  PGPRPAPAPPKAAPSAPPPPPAA----APPHVAPPPPPPAPPRAA-----PPPPP 103

 Score = 37.4 bits (85), Expect = 0.11
 Identities = 28/80 (35%), Positives = 29/80 (36%)
 Frame = +1

Query: 262 PSSLTA*TPPWPAATSPPHRPWPRVSTHWRPSWRTAPRPSTPPTPPASWRCSTSPIASSP 441
           PS   A   P P     P  P    S    P     P  + PP PPA  R      A  P
Sbjct: 47  PSEEKAKEAPPPGPRPAPAPPKAAPSAPPPPPAAAPPHVAPPPPPPAPPRA-----APPP 101

Query: 442 PTPPAPPAAACCRRRPPRSP 501
           P P A PA A  R  PP  P
Sbjct: 102 PPPAAAPAPAPKRAEPPPPP 121

 Score = 36.6 bits (83), Expect = 0.19
 Identities = 48/167 (28%), Positives = 58/167 (33%), Gaps = 10/167 (5%)
 Frame = +1

Query: 1   PPA*PAWSCRP*PRWPRFGT*RAWPTWPTPTRTTCACWACP--STPPPTAPLSSCWPTTT 174
           PP  PA +  P P+       RA P  P P   +      P  + PPP AP  S  PT  
Sbjct: 100 PPPPPAAAPAPAPK-------RAEPPPPPPPSHSAPPPPPPHAAPPPPPAPKPSAPPTAA 152

Query: 175 TSRALWRWRRQPWRC*TWRAWWPPTCSCTPSSLTA*TPPW--PAATSPPHRPWPRVS--- 339
            +    R    P      R   PP      +      PP   P    PP+   P  +   
Sbjct: 153 PAE---RPAAPPPAAAPVR---PPAPPAGEAPQRRGPPPGAVPPNAVPPNAAAPDAAKPD 206

Query: 340 -THWRPSWRTAPRPSTPPTPPASWRCSTSPIASSPPT--PPAPPAAA 471
                P  R  P P  P TPP +     +P     P   PP PPAAA
Sbjct: 207 AAKQPPGERRGPPPGAPGTPPNATAPGMTPPPGEAPRRGPPPPPAAA 253

 Score = 34.3 bits (77), Expect = 0.95
 Identities = 41/125 (32%), Positives = 47/125 (36%), Gaps = 7/125 (5%)
 Frame = -1

Query: 360 PGRPPVRTDPRPGPVRR*CRGRPRRRSGRQRTWCT*AGWRPPCPPRSA-PPRLASP---- 196
           PG PP  T P   P      G   RR              PP PP +A PP  A+P    
Sbjct: 223 PGTPPNATAPGMTPPP----GEAPRRG-------------PPPPPAAANPPPAAAPTPAP 265

Query: 195 --APQSP*RSSRRPAAGQRCRRRRR*RARPTGAGSPCWCWPGRPRSSGPKPRPARSRATG 22
             APQ+   S   P+            ARP+G   P    PG P + GP PRP      G
Sbjct: 266 SAAPQAAPTSPANPSGPAVAP-----VARPSGERGP---QPGAP-AGGPPPRP----QAG 312

Query: 21  PGRSG 7
           PG  G
Sbjct: 313 PGAPG 317

 Score = 33.9 bits (76), Expect = 1.2
 Identities = 24/73 (32%), Positives = 32/73 (42%)
 Frame = +1

Query: 286 PPWPAATSPPHRPWPRVSTHWRPSWRTAPRPSTPPTPPASWRCSTSPIASSPPTPPAPPA 465
           PP  A  +PP+   P ++    P    APR   PP P A+   +  P A+  P P A P 
Sbjct: 218 PPPGAPGTPPNATAPGMT----PPPGEAPRRGPPPPPAAA---NPPPAAAPTPAPSAAPQ 270

Query: 466 AACCRRRPPRSPS 504
           AA      P  P+
Sbjct: 271 AAPTSPANPSGPA 283

 Score = 33.5 bits (75), Expect = 1.6
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = +1

Query: 367 APRPS---TPPTPPASWRCSTSPIASSPPTPPAPPAAACCRRRPPRSP 501
           AP PS       PP   R + +P  ++P  PP PPAAA     PP  P
Sbjct: 44  APAPSEEKAKEAPPPGPRPAPAPPKAAPSAPPPPPAAAPPHVAPPPPP 91

 Score = 33.1 bits (74), Expect = 2.1
 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
 Frame = -1

Query: 240 PPCPPRSAPPRLA-SPAPQSP*RSSRRPAAGQRCRRRRR*RARPTGAGSPCWCWPGRPRS 64
           PP PP +APP +A  P P +P R++  P            RA P     P    P  P  
Sbjct: 74  PPPPPAAAPPHVAPPPPPPAPPRAAPPPPPPAAAPAPAPKRAEPPPPPPPSHSAPPPPPP 133

Query: 63  SGPKPRPARSRATGP 19
               P P   + + P
Sbjct: 134 HAAPPPPPAPKPSAP 148

>gb|AAA59875.1| mucin
          Length = 573

 Score = 58.9 bits (141), Expect = 4e-08
 Identities = 51/146 (34%), Positives = 60/146 (40%), Gaps = 3/146 (2%)
 Frame = +1

Query: 76  TWPTPTRTTCACWACPSTPPPTAPLSSCWPTTTTSRALWRWRRQPWRC*TWRAWWPPTCS 255
           T P PT T     +  +TPPPT   S   PTTT S         P    T     PPT +
Sbjct: 104 TTPPPTTTPSPPISTTTTPPPTTTPSP--PTTTPSPPT----TTPSPPTTTTTTPPPTTT 157

Query: 256 CTPSSLTA*TPPWPAATSPPHR-PWPRVSTHWRPSWRTAPRP--STPPTPPASWRCSTSP 426
            +P + T  TPP    T PP   P P  +T   P   T P P  +TP TPP      TS 
Sbjct: 158 PSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPP------TST 211

Query: 427 IASSPPTPPAPPAAACCRRRPPRSPS 504
               P T P+PP        P  +PS
Sbjct: 212 TTLPPTTTPSPPPTTTTTPPPTTTPS 237

 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 47/146 (32%), Positives = 64/146 (43%), Gaps = 2/146 (1%)
 Frame = +1

Query: 73  PTWPTPTRTTCACWACPSTPPPTAPLSSCWPTTTTSRALWRWRRQPWRC*TWRAWWPPTC 252
           P+ PT T TT      PS PP T P++   PT+TT+         P    T     PPT 
Sbjct: 181 PSPPTTTTTTPPPTTTPS-PPTTTPITP--PTSTTTLPPTTTPSPPP---TTTTTPPPTT 234

Query: 253 SCTPSSLTA*TPPWPAATSPPHRPWPRVSTHWRPSWRTAPRPSTPPTPPASWRCS--TSP 426
           + +P + T  +PP    T+PP    P   T    +  T P P+T P+PP +   +  TS 
Sbjct: 235 TPSPPTTTTPSPPTITTTTPPPTTTPSPPT----TTTTTPPPTTTPSPPTTTPITPPTST 290

Query: 427 IASSPPTPPAPPAAACCRRRPPRSPS 504
               P T P+PP        P  +PS
Sbjct: 291 TTLPPTTTPSPPPTTTTTPPPTTTPS 316

 Score = 54.3 bits (129), Expect = 9e-07
 Identities = 47/146 (32%), Positives = 62/146 (42%), Gaps = 3/146 (2%)
 Frame = +1

Query: 76  TWPTPTRTTCACWACPSTP-PPTAPLSSCWPTTTTSRALWRWRRQPWRC*TWRAWWPPTC 252
           T P+P  T+       +TP PPT   ++  PTTT S  +      P    T     P + 
Sbjct: 62  TTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPP---TTTPSPPIST 118

Query: 253 SCTPSSLTA*TPPWPAATSPPHRPWPRVSTHWRPSWRTAPRP--STPPTPPASWRCSTSP 426
           + TP   T  +PP    + P   P P  +T   P   T P P  +TP TPPAS   +T P
Sbjct: 119 TTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPAS--TTTLP 176

Query: 427 IASSPPTPPAPPAAACCRRRPPRSPS 504
               P T P+PP        P  +PS
Sbjct: 177 ----PTTTPSPPTTTTTTPPPTTTPS 198

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 47/150 (31%), Positives = 60/150 (39%), Gaps = 7/150 (4%)
 Frame = +1

Query: 76  TWPTPTRTTCACWACPSTPPPTAPLSSCWPTTT-----TSRALWRWRRQPWRC*TWRAWW 240
           T P PT T        +TPPPT   S   PTTT     TS         P    T     
Sbjct: 252 TTPPPTTTPSPPTTTTTTPPPTTTPSP--PTTTPITPPTSTTTLPPTTTPSPPPTTTTTP 309

Query: 241 PPTCSCTPSSLTA*TPPWPAATSPPHRPWPR--VSTHWRPSWRTAPRPSTPPTPPASWRC 414
           PPT + +P + T  +PP    T+PP    P   ++T   P   T   PS   TP +    
Sbjct: 310 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITT 369

Query: 415 STSPIASSPPTPPAPPAAACCRRRPPRSPS 504
           +T+P   S  T P+PP        P  +PS
Sbjct: 370 TTTP---SSTTTPSPPPTTMTTPSPTTTPS 396

 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 48/161 (29%), Positives = 58/161 (35%), Gaps = 18/161 (11%)
 Frame = +1

Query: 76  TWPTPTRTTCACWACPS----TPPPTAPLSSCWPTTTT-------------SRALWRWRR 204
           T P PT T       PS    TP P    ++  P TTT             S        
Sbjct: 120 TTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTT 179

Query: 205 QPWRC*TWRAWWPPTCSCTPSSLTA*TPPWPAATSPP-HRPWPRVSTHWRPSWRTAPRPS 381
            P    T     PPT + +P + T  TPP    T PP   P P  +T   P   T P P 
Sbjct: 180 TPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPP 239

Query: 382 TPPTPPASWRCSTSPIASSPPTPPAPPAAACCRRRPPRSPS 504
           T  TP      +T+P    P T P+PP        P  +PS
Sbjct: 240 TTTTPSPPTITTTTP---PPTTTPSPPTTTTTTPPPTTTPS 277

 Score = 48.5 bits (114), Expect = 5e-05
 Identities = 41/132 (31%), Positives = 52/132 (39%), Gaps = 2/132 (1%)
 Frame = +1

Query: 76  TWPTPTRTTCACWACPSTPPPTAPLSSCWPTTTTSRALWRWRRQPWRC*TWRAWWPPTCS 255
           T P+P  TT       +TPPPT   SS  P TTT                     P T  
Sbjct: 321 TTPSPPITTT------TTPPPTTTPSS--PITTTPSP------------------PTTTM 354

Query: 256 CTPSSLTA*TPPWPAATSPPHRPWPRVSTHWRPSWRTAPRPSTPPTPPASWRCSTSPIAS 435
            TPS  T  + P    T+P     P       P+  T P P+T P+PP +   +  P  +
Sbjct: 355 TTPSPTTTPSSPITTTTTPSSTTTPSPP----PTTMTTPSPTTTPSPPTTTMTTLPPTTT 410

Query: 436 SPP--TPPAPPA 465
           S P  T P PP+
Sbjct: 411 SSPLTTTPLPPS 422

 Score = 39.3 bits (90), Expect = 0.030
 Identities = 36/123 (29%), Positives = 47/123 (37%), Gaps = 3/123 (2%)
 Frame = +1

Query: 94  RTTCACWA---CPSTPPPTAPLSSCWPTTTTSRALWRWRRQPWRC*TWRAWWPPTCSCTP 264
           R  C CW    C +TP P     S  PT+TT+                    PPT + +P
Sbjct: 43  RVNC-CWPMDKCITTPSPPTTTPSPPPTSTTTL-------------------PPTTTPSP 82

Query: 265 SSLTA*TPPWPAATSPPHRPWPRVSTHWRPSWRTAPRPSTPPTPPASWRCSTSPIASSPP 444
            + T  TPP     SPP      ++T       T P P+T P+PP S          +  
Sbjct: 83  PTTTTTTPPPTTTPSPP------ITT------TTTPPPTTTPSPPIS----------TTT 120

Query: 445 TPP 453
           TPP
Sbjct: 121 TPP 123

 Score = 35.4 bits (80), Expect = 0.43
 Identities = 24/77 (31%), Positives = 34/77 (43%), Gaps = 3/77 (3%)
 Frame = +1

Query: 283 TPPWPAATSPPHRPWPRVSTHWRPSWRTAPRPSTPPTPPASWRCS---TSPIASSPPTPP 453
           T P P  T+P   P P  +T   P+   +P  +T  TPP +   S   T+     P T P
Sbjct: 55  TTPSPPTTTPS--PPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTP 112

Query: 454 APPAAACCRRRPPRSPS 504
           +PP +      P  +PS
Sbjct: 113 SPPISTTTTPPPTTTPS 129



EST assemble image


clone accession position
1 MXL076d11_r BP097481 1 343
2 MXL060e10_r BP096549 118 494
3 MX048c04_r BP087969 208 514




Chlamydomonas reinhardtii
Kazusa DNA Research Institute