Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003380A_C01 KCC003380A_c01
(397 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00089735.1| COG0811: Biopolymer transport proteins [Azoto... 40 0.010
ref|XP_216586.2| similar to Msx-2 interacting nuclear target pro... 36 0.11
gb|AAL23952.1|AF425241_1 cell surface immobilization antigen Ser... 36 0.15
dbj|BAB55754.1| OSJNBa0025P13.14 [Oryza sativa (japonica cultiva... 35 0.19
ref|ZP_00054334.1| COG3394: Uncharacterized protein conserved in... 34 0.43
>ref|ZP_00089735.1| COG0811: Biopolymer transport proteins [Azotobacter vinelandii]
Length = 391
Score = 39.7 bits (91), Expect = 0.010
Identities = 31/75 (41%), Positives = 36/75 (47%), Gaps = 1/75 (1%)
Frame = -3
Query: 377 RVAAPAARAVPTAPLPPARECP*PALSG*TKPPAQRRQLRRARRQRF-CGSVSGPGTPTQ 201
R PA R PLP P LSG +P +RQL ARR+ C PG P +
Sbjct: 19 RRRGPAGRCRGAGPLPGRG----PRLSGGLQPG--QRQLSGARRRAAACAQRRLPGRPER 72
Query: 200 RAGNRRLQPRRAPGD 156
RAG+RR R PGD
Sbjct: 73 RAGHRRRLRDRRPGD 87
>ref|XP_216586.2| similar to Msx-2 interacting nuclear target protein [Rattus
norvegicus]
Length = 3544
Score = 36.2 bits (82), Expect = 0.11
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = -3
Query: 371 AAPAARAVPTAPLPPARECP*PALSG*TKPPAQR-RQLRRARRQRFCGSVSG---PGTPT 204
A PA T P+PPA C LS +PP+ + Q+ + + G + P PT
Sbjct: 3230 AQPAPSTQSTQPVPPAPPCQPSQLSQPAQPPSGKIPQVSQEAKGTQTGGIEQTRLPAMPT 3289
Query: 203 QRAGNRRLQPRRAPGD 156
R Q +RAPG+
Sbjct: 3290 NRPSEPHAQAQRAPGE 3305
>gb|AAL23952.1|AF425241_1 cell surface immobilization antigen SerH4 [Tetrahymena thermophila]
Length = 397
Score = 35.8 bits (81), Expect = 0.15
Identities = 28/76 (36%), Positives = 34/76 (43%), Gaps = 3/76 (3%)
Frame = -2
Query: 381 TACGG-TSGEGCADCTAATGEGMPLTRTVWLNKAASPASSAAAGSSAALLRQCVGARHTD 205
TAC G TSG A+C A P T+ V+ N A SS A S++ GA T
Sbjct: 216 TACSGITSGWTDANCNACATTASPATKNVFANGA---GSSCVAASASCTTASRAGAAWTV 272
Query: 204 TACR--QPPAPAEKGT 163
+ C P PA GT
Sbjct: 273 SDCTLCTPSTPALVGT 288
Score = 35.4 bits (80), Expect = 0.19
Identities = 28/76 (36%), Positives = 34/76 (43%), Gaps = 3/76 (3%)
Frame = -2
Query: 381 TACGG-TSGEGCADCTAATGEGMPLTRTVWLNKAASPASSAAAGSSAALLRQCVGARHT- 208
TAC G TSG A+C A P+T+ V+ N A SS A S++ GA T
Sbjct: 141 TACSGITSGWTDANCNACATTASPVTKNVFANGA---GSSCVAASASCTTASRAGAAWTV 197
Query: 207 -DTACRQPPAPAEKGT 163
D P PA GT
Sbjct: 198 GDCTLCTPSTPALVGT 213
>dbj|BAB55754.1| OSJNBa0025P13.14 [Oryza sativa (japonica cultivar-group)]
Length = 417
Score = 35.4 bits (80), Expect = 0.19
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 163 GALLGWSR-RLPARCVGVPGPDTLPQKRCRRARRS*RRWAGGFV*PDSAGQGHSLAGGSG 339
G +GW R R P R + P + RR+ RW GG + GQG S+
Sbjct: 94 GCHVGWGRERRPGRLIRWPSTSDVN-------RRTAARWIGGLATEERGGQGESIQRSGL 146
Query: 340 AVGTALAAGAATRS 381
A G AAG +S
Sbjct: 147 AGGKTTAAGGGDQS 160
>ref|ZP_00054334.1| COG3394: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum]
Length = 491
Score = 34.3 bits (77), Expect = 0.43
Identities = 39/134 (29%), Positives = 46/134 (34%), Gaps = 13/134 (9%)
Frame = -1
Query: 373 WR---HQRRGLCRLHRCHRRGNALDP--HCLAKQSRQPSVVSCGGLVGSASAAVCRGPAH 209
WR H G C RC RRG P H +A P GL SA AA P H
Sbjct: 40 WRAHLHGAVGTCG-DRCLRRGRCGRPGRHRIAAG---PDAAPLAGLGPSAGAAGAGRPGH 95
Query: 208 RH--SVPATAGSSREGHRATSCTSARRNT------QMTTSP*AERCMSHHALTELKPQQA 53
RH R+ HR RR Q+ ++HHA +
Sbjct: 96 RHRGKTGGNRAELRQCHRPAPAAGHRRGLQHLFRGQLAQWRGRSSVVAHHAGRVVLGADH 155
Query: 52 RCRSRQPGAMQPQG 11
R RQ G + P G
Sbjct: 156 RFGLRQSGGLAPSG 169
