KCC003368A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003368A_C01 KCC003368A_c01
gcttgatgcctcggttttCTACTAGCATTGAGCATCAGGCAACGCGTTAAGTTGTGCACA
CCAACCTCACATAGCTTGACACAGGGCCACTCGCCTTTCTTTCGCGAAACAACCTGGCAG
CCATGGCGCTTGGCATGCAGCGCCAACTCCGTGGGCATCAGCGCACGGCGCCAGCGCCAG
TGTTGCCGGTAGTGCGCCCTCGTGCGACTCGGGCGACTGGGCCCAGCGCGTCAAGAGGCA
GCCGTCGTCACTTGCTACAACAGATAGCAGGAGCGACACTCCTAGTGCACGCACGGAGCG
TTGCGGACCCTTCCTCGGTGGCCTCAGCCTCTGCTACTCTAGCGGCTCCCACCGAGGAAG
CGTCAACGTCGACAACAGTCCTAGGAAACAGCGCGCTTGACCCGCCAACCTACGTGACAG
CCACGGGGAGGATCATTGCAATTGGGGACCTGCACGGCGACCTCGACAAAGCCGTTGAGG
CACTGAAGCTCGGACGTGTTATCAGTGTCAGCGACGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003368A_C01 KCC003368A_c01
         (517 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAL84981.1| At1g07010/F10K1_19 [Arabidopsis thaliana]               49  5e-05
ref|NP_172182.2| calcineurin-like phosphoesterase family [Arabid...    49  5e-05
emb|CAD41411.1| OSJNBb0078D11.13 [Oryza sativa (japonica cultiva...    46  2e-04
gb|AAM22720.1|AC092388_4 putative protein-tyrosine-phosphatase [...    45  4e-04
pir||H86204 probable phosphoesterase (EC 3.1.-.-) F10K1.27 [simi...    41  0.008

>gb|AAL84981.1| At1g07010/F10K1_19 [Arabidopsis thaliana]
          Length = 389

 Score = 48.5 bits (114), Expect = 5e-05
 Identities = 30/74 (40%), Positives = 44/74 (58%), Gaps = 1/74 (1%)
 Frame = +3

Query: 288 HARSVADPSSVASASATLAAPTEEASTSTTVLGNSALDPPTYVTATGR-IIAIGDLHGDL 464
           H + + +PSS +  S +      E +    V+     DPPT+V+A  R I+A+GDLHGDL
Sbjct: 16  HPQKLLEPSSSSLLSTSNG---NELALKPIVING---DPPTFVSAPARRIVAVGDLHGDL 69

Query: 465 DKAVEALKLGRVIS 506
            KA +AL+L  V+S
Sbjct: 70  GKARDALQLAGVLS 83

>ref|NP_172182.2| calcineurin-like phosphoesterase family [Arabidopsis thaliana]
           gi|22531180|gb|AAM97094.1| unknown protein [Arabidopsis
           thaliana] gi|30725626|gb|AAP37835.1| At1g07010
           [Arabidopsis thaliana]
          Length = 389

 Score = 48.5 bits (114), Expect = 5e-05
 Identities = 30/74 (40%), Positives = 44/74 (58%), Gaps = 1/74 (1%)
 Frame = +3

Query: 288 HARSVADPSSVASASATLAAPTEEASTSTTVLGNSALDPPTYVTATGR-IIAIGDLHGDL 464
           H + + +PSS +  S +      E +    V+     DPPT+V+A  R I+A+GDLHGDL
Sbjct: 16  HPQKLLEPSSSSLLSTSNG---NELALKPIVING---DPPTFVSAPARRIVAVGDLHGDL 69

Query: 465 DKAVEALKLGRVIS 506
            KA +AL+L  V+S
Sbjct: 70  GKARDALQLAGVLS 83

>emb|CAD41411.1| OSJNBb0078D11.13 [Oryza sativa (japonica cultivar-group)]
          Length = 1636

 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
 Frame = +3

Query: 117 AAMALGMQRQLR---GHQRTAPAPVLPVVRPRATRATGPSASRGSRRHLLQQIAG--ATL 281
           A  A G+QRQL    G Q   PAPV+P+V P + +   P       +H +  + G  A  
Sbjct: 430 AGTAGGLQRQLLLEVGVQHAEPAPVVPLVLPTSAQQAPPLVLPAPVQHSVPSVDGLAAAQ 489

Query: 282 LVHARSVAD--PSSVASASATLAAPTEEASTSTTVLGNSALDPPTYVTATGRII---AIG 446
            + A  +A   PS  A+ +A L +P         +LG+  + PP    + G++     +G
Sbjct: 490 PLAASDIAQDVPSQAAAVAAVLGSP-------DVLLGSEDISPPLASLSVGQVAPPSPVG 542

Query: 447 DLHGDLDKAVEALKLG 494
               D+ +AV A  LG
Sbjct: 543 GRTPDVGQAVAAAVLG 558

>gb|AAM22720.1|AC092388_4 putative protein-tyrosine-phosphatase [Oryza sativa (japonica
           cultivar-group)] gi|31431870|gb|AAP53582.1| putative
           protein-tyrosine-phosphatase [Oryza sativa (japonica
           cultivar-group)]
          Length = 377

 Score = 45.4 bits (106), Expect = 4e-04
 Identities = 42/118 (35%), Positives = 57/118 (47%), Gaps = 6/118 (5%)
 Frame = +3

Query: 171 PAPVLPVVRPRATR---ATGPSASR--GSRRHLLQQIAGATLLVHARSVADPSSVASASA 335
           P PV       AT    +T P+A+   G RR   +  A   + + A      S  AS S 
Sbjct: 5   PPPVRVAAAAAATTFGLSTSPAAATPAGCRRCGPRGRAAVHVAISA------SGRASFSR 58

Query: 336 TLAAPTEEASTSTTVLGNSALDPPTYVTATGR-IIAIGDLHGDLDKAVEALKLGRVIS 506
             A        + TV G    DPPT+VTA GR I+A+GDLHGDL++   AL +  ++S
Sbjct: 59  GAAGDGGGGRPAITVAG----DPPTFVTAPGRRIVAVGDLHGDLNQTRAALVMAGLLS 112

>pir||H86204 probable phosphoesterase (EC 3.1.-.-) F10K1.27 [similarity] -
           Arabidopsis thaliana
           gi|8954044|gb|AAF82218.1|AC067971_26 Contains similarity
           to serine-threonine protein phosphatase - fission yeast
           from Schizosaccharomyces pombe gb|AL031179.  ESTs
           gb|T88261, gb|T04457, gb|AA585938, gb|AA650911 and
           gb|AA598061 come from this gene. [Arabidopsis thaliana]
          Length = 415

 Score = 41.2 bits (95), Expect = 0.008
 Identities = 29/83 (34%), Positives = 42/83 (49%), Gaps = 10/83 (12%)
 Frame = +3

Query: 288 HARSVADPSSVASASATLAAPTEEASTSTTVLGNSALDPPTYVTATGRIIA--------- 440
           H + + +PSS +  S +      E +    V+     DPPT+V+A  R I          
Sbjct: 16  HPQKLLEPSSSSLLSTSNG---NELALKPIVING---DPPTFVSAPARRIVAGFGFGYAL 69

Query: 441 -IGDLHGDLDKAVEALKLGRVIS 506
            +GDLHGDL KA +AL+L  V+S
Sbjct: 70  TVGDLHGDLGKARDALQLAGVLS 92



EST assemble image


clone accession position
1 MX017g12_r BP086830 1 367
2 MXL088c10_r BP098152 19 517




Chlamydomonas reinhardtii
Kazusa DNA Research Institute