Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003353A_C01 KCC003353A_c01
(404 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P12811|HS2C_CHLRE CHLOROPLAST HEAT SHOCK 22 KD PROTEIN gi|812... 224 2e-58
ref|NP_745457.1| heat shock protein, HSP20 family [Pseudomonas p... 57 6e-08
ref|ZP_00112514.1| COG0071: Molecular chaperone (small heat shoc... 50 7e-06
ref|NP_704944.1| small heat shock protein, putative [Plasmodium ... 49 1e-05
gb|AAF78436.1|AC018748_15 Contains similarity to 17.6 KD class I... 48 4e-05
>sp|P12811|HS2C_CHLRE CHLOROPLAST HEAT SHOCK 22 KD PROTEIN gi|81238|pir||S04939 heat
shock 22K protein - Chlamydomonas reinhardtii
gi|18152|emb|CAA33152.1| unnamed protein product
[Chlamydomonas reinhardtii]
Length = 157
Score = 224 bits (572), Expect = 2e-58
Identities = 110/110 (100%), Positives = 110/110 (100%)
Frame = +2
Query: 74 MALSNYVFGNSAADPFFTEMDRAVNRMINNALGVAPTSAGKAGHTHAPMDIIESPTAFEL 253
MALSNYVFGNSAADPFFTEMDRAVNRMINNALGVAPTSAGKAGHTHAPMDIIESPTAFEL
Sbjct: 1 MALSNYVFGNSAADPFFTEMDRAVNRMINNALGVAPTSAGKAGHTHAPMDIIESPTAFEL 60
Query: 254 HADAPGMGPDDVKVELQEGVLMVTGERKLSHTTKEAGGKVWRSERTAYSF 403
HADAPGMGPDDVKVELQEGVLMVTGERKLSHTTKEAGGKVWRSERTAYSF
Sbjct: 61 HADAPGMGPDDVKVELQEGVLMVTGERKLSHTTKEAGGKVWRSERTAYSF 110
>ref|NP_745457.1| heat shock protein, HSP20 family [Pseudomonas putida KT2440]
gi|24984955|gb|AAN68921.1|AE016523_10 heat shock
protein, HSP20 family [Pseudomonas putida KT2440]
Length = 151
Score = 57.0 bits (136), Expect = 6e-08
Identities = 27/103 (26%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Frame = +2
Query: 101 NSAADPF--FTEMDRAVNRMINNALGVAPTSAGKAGHTHAPMDIIESPTAFELHADAPGM 274
N ++DP F ++ R + ++ LG + A +++ +P++ E++A PG+
Sbjct: 7 NLSSDPIAEFEKLQRELQHVLGTGLGRPGSIRALASGAFPAINVASTPSSMEVYAFVPGV 66
Query: 275 GPDDVKVELQEGVLMVTGERKLSHTTKEAGGKVWRSERTAYSF 403
P D+ +++ G+L ++GER+ + +T+E V+ +ER A F
Sbjct: 67 DPSDIDLQIHRGLLSISGERRPARSTQEGNCSVYANERYAGPF 109
>ref|ZP_00112514.1| COG0071: Molecular chaperone (small heat shock protein) [Nostoc
punctiforme]
Length = 190
Score = 50.1 bits (118), Expect = 7e-06
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Frame = +2
Query: 131 MDRAVNRMINNALGVAPTSAGKAGHTHA--------PMDIIESPTAFELHADAPGMGPDD 286
M R +NR+ + L + + G H P +I E+ AF+L + PG+ PDD
Sbjct: 15 MQRQINRLFDQMLSSQESDRLQGGVAHRGDIIAFTPPAEIHETSDAFKLRIELPGLKPDD 74
Query: 287 VKVELQEGVLMVTGERKLSHTTKEAGGKVWRSERTAYSF 403
+ V++ + ++GER+ TT+E G + RSE SF
Sbjct: 75 LDVKVSPEAVEISGERRFETTTEEKG--IRRSEFRYGSF 111
>ref|NP_704944.1| small heat shock protein, putative [Plasmodium falciparum 3D7]
gi|23615189|emb|CAD52179.1| small heat shock protein,
putative [Plasmodium falciparum 3D7]
Length = 211
Score = 49.3 bits (116), Expect = 1e-05
Identities = 28/94 (29%), Positives = 51/94 (53%), Gaps = 4/94 (4%)
Frame = +2
Query: 134 DRAVNRMINNALGVAPTSAG---KAGHTHAP-MDIIESPTAFELHADAPGMGPDDVKVEL 301
D +NR N+ L ++ + + G+++ P MD+++ E+ D PG+ +DV++ L
Sbjct: 74 DYDINRNRNHDLLLSKPFSSMFRRDGYSNVPAMDVLDKEKHLEIKMDVPGLNKEDVQINL 133
Query: 302 QEGVLMVTGERKLSHTTKEAGGKVWRSERTAYSF 403
+G L ++GE K SH K+ + + ER SF
Sbjct: 134 DDGKLEISGEFKKSHEQKDEQQRYYIKERCESSF 167
>gb|AAF78436.1|AC018748_15 Contains similarity to 17.6 KD class I heat shock protein from
Arabidopsis thaliana gi|P13853 and contains Hsp20/alpha
crystallin PF|00011 and signal peptidase I PF|00461
domains. ESTs gb|AI998650, gb|AW004417, gb|AI998904
come from this gene
Length = 403
Score = 47.8 bits (112), Expect = 4e-05
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Frame = +2
Query: 74 MALSNYVFGN---SAADPFFTEM-DRAVNRMINNALGVAPTSAGKAGHTHAPMDIIESPT 241
M+L +FG + DPF ++ D + + L AP + A T+A +D E+P
Sbjct: 247 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP-AMDVAAFTNAKVDWRETPE 305
Query: 242 AFELHADAPGMGPDDVKVELQEG-VLMVTGERKLSHTTKEAGGKVWRSERTAYSF 403
A AD PG+ ++VKVE+++G +L ++GER S+ +E K R ER++ F
Sbjct: 306 AHVFKADLPGLRKEEVKVEVEDGNILQISGER--SNENEEKNDKWHRVERSSGKF 358
