KCC003352A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003352A_C01 KCC003352A_c01
cgcgggcgcgcagtaccactacggcatggagtgcctcttccgcttctacagctacggcct
ggagaagagcttccgtgccgACCTGTACAAGGACTTCGAGGAGATGACGCTCAAGGACTT
TGACGCGTACGACAGCCTGTACGGCCTGGAGAAGTTCTGGGCGTTCCACTTCTACGCCGG
CTTCCCCAAGGACAGCGGGCTTGAGATCCACGCGCGGCTCAAGACGCTGCTGGAGACGGA
GTACAAGTCGTCGGAGGACTTCAAGCGGGAGAACGCTCGCCGCCAGCAGGAGAAGGCCGC
TGCCAAGGCCGCGGCCGCGAAGGCGGAGGGCGAGAAGCCCATTGAGAAGTCGGCGCCGGT
GGCCGTGCAGGCCAAGTAGGCGAGCAGCCAGCGAGAGCAGTCATGGAGCAATCGGCGAGG
AGCCGGCGAGCGGGCGAGGAGCGGTTGGAGTCGGGAGCAGCCGGCATGCGGAGTGGCGCT
CTGCCGGCAACCGTGAAGCAGCGTCTGTGTGGAGTGGCACCGAGGGTGCAGGTGCAGGAG
TGAGGCAGACAATGTGCCGGGTGCGGATGCGGGTGAGTGCATGCGGCGGGGAGTGGTGCG
TAAAAGTAGAACGTTGATACGGGCTTGCTGAATTGCTGGCGCCGTGCTGTGGTGGGTGAG
GAAAGCAAACTAGTTCAGCGGCGCCTGTGCGATGGTTGCGGGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003352A_C01 KCC003352A_c01
         (703 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA90356.1| unnamed protein product [Oryza sativa (japonica ...   102  4e-21
ref|NP_568409.1| proline-rich protein family [Arabidopsis thalia...   102  4e-21
pir||T42646 hypothetical protein DKFZp727K171.1 - human (fragmen...    92  1e-17
dbj|BAC98012.1| mKIAA0731 protein [Mus musculus]                       91  1e-17
ref|XP_126172.2| RIKEN cDNA 3110040D16 [Mus musculus]                  91  1e-17

>dbj|BAA90356.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
          Length = 928

 Score =  102 bits (255), Expect = 4e-21
 Identities = 54/112 (48%), Positives = 73/112 (64%)
 Frame = +2

Query: 2    AGAQYHYGMECLFRFYSYGLEKSFRADLYKDFEEMTLKDFDAYDSLYGLEKFWAFHFYAG 181
            A A Y YG+ECLFRFYSYGLEK+F+ ++Y+DFE++TL +F     LYGLEK+WAFH +  
Sbjct: 818  AAANYRYGLECLFRFYSYGLEKNFQRNVYEDFEQLTL-EFHHKGDLYGLEKYWAFHHFRN 876

Query: 182  FPKDSGLEIHARLKTLLETEYKSSEDFKRENARRQQEKAAAKAAAAKAEGEK 337
                S +  H  L+ LL+ E+++ EDFK   AR+  EK    + AA A   K
Sbjct: 877  -QDSSPIIKHPELERLLKEEFRTIEDFK---ARKAAEKETGSSTAAAAGHNK 924

>ref|NP_568409.1| proline-rich protein family [Arabidopsis thaliana]
            gi|15450527|gb|AAK96556.1| AT5g21160/T10F18_190
            [Arabidopsis thaliana] gi|22655032|gb|AAM98107.1|
            At5g21160/T10F18_190 [Arabidopsis thaliana]
            gi|29294066|gb|AAO73903.1| proline-rich protein family
            [Arabidopsis thaliana]
          Length = 826

 Score =  102 bits (255), Expect = 4e-21
 Identities = 52/98 (53%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2    AGAQYHYGMECLFRFYSYGLEKSFRADLYKDFEEMTLKDFDAYDSLYGLEKFWAFHFYAG 181
            A   Y YG+ECLFRFYSYGLEK F  DLYKDFE+++L DF    +LYGLEK+WAFH Y G
Sbjct: 728  AAGNYDYGLECLFRFYSYGLEKHFDEDLYKDFEKLSL-DFYHKGNLYGLEKYWAFHHYRG 786

Query: 182  FPKDSGLEIHARLKTLLETEYKSSEDFK-RENARRQQE 292
              K+  +  H  L+ LL+ E++S +DF+ +E    Q+E
Sbjct: 787  --KEEPITKHPELEKLLKEEFRSIDDFRAKETITNQKE 822

>pir||T42646 hypothetical protein DKFZp727K171.1 - human (fragment)
           gi|6453438|emb|CAB61364.1| hypothetical protein [Homo
           sapiens]
          Length = 559

 Score = 91.7 bits (226), Expect = 1e-17
 Identities = 50/111 (45%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
 Frame = +2

Query: 14  YHYGMECLFRFYSYGLEKSFRADLYKDFEEMTLKDFDAYDSLYGLEKFWAFHFYAGFPKD 193
           Y YG+ECLFR+YSYGLEK FR D++KDF+E TLKD++A   LYGLEKFWAF  Y+   K 
Sbjct: 410 YRYGLECLFRYYSYGLEKKFRLDIFKDFQEETLKDYEA-GQLYGLEKFWAFLKYS---KA 465

Query: 194 SGLEIHARLKTLLETEYKSSEDFKRENARRQQ---EKAAAKAAAAKAEGEK 337
             L+I  +L+  L  +++  EDF+ +    ++   ++ +  A     EG K
Sbjct: 466 KNLDIDPKLQEYL-GKFRRLEDFRVDPPMGEEGNHKRHSVVAGGGGGEGRK 515

>dbj|BAC98012.1| mKIAA0731 protein [Mus musculus]
          Length = 364

 Score = 91.3 bits (225), Expect = 1e-17
 Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
 Frame = +2

Query: 14  YHYGMECLFRFYSYGLEKSFRADLYKDFEEMTLKDFDAYDSLYGLEKFWAFHFYAGFPKD 193
           Y YG+ECLFR+YSYGLEK FR D++KDF+E T+KD++A   LYGLEKFWAF  Y+   K 
Sbjct: 216 YRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEA-GQLYGLEKFWAFLKYS---KA 271

Query: 194 SGLEIHARLKTLLETEYKSSEDFKRENARRQQ--EKAAAKAAAAKAEGEK 337
             L+I  +L+  L  +++  EDF+ +    ++   K     A    EG K
Sbjct: 272 KNLDIDPKLQEYL-GKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRK 320

>ref|XP_126172.2| RIKEN cDNA 3110040D16 [Mus musculus]
          Length = 501

 Score = 91.3 bits (225), Expect = 1e-17
 Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
 Frame = +2

Query: 14  YHYGMECLFRFYSYGLEKSFRADLYKDFEEMTLKDFDAYDSLYGLEKFWAFHFYAGFPKD 193
           Y YG+ECLFR+YSYGLEK FR D++KDF+E T+KD++A   LYGLEKFWAF  Y+   K 
Sbjct: 353 YRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEA-GQLYGLEKFWAFLKYS---KA 408

Query: 194 SGLEIHARLKTLLETEYKSSEDFKRENARRQQ--EKAAAKAAAAKAEGEK 337
             L+I  +L+  L  +++  EDF+ +    ++   K     A    EG K
Sbjct: 409 KNLDIDPKLQEYL-GKFRRLEDFRVDPPMGEEGNHKRHPVVAGGSGEGRK 457



EST assemble image


clone accession position
1 MX045b06_r BP087860 1 479
2 MX002g05_r BP086146 138 698
3 MX002b08_r BP086112 230 703




Chlamydomonas reinhardtii
Kazusa DNA Research Institute