Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003322A_C01 KCC003322A_c01
(420 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_826571.1| hypothetical protein [Streptomyces avermitilis ... 40 0.006
ref|NP_628191.1| putative bifunctional protein (histidine kinase... 33 0.014
dbj|BAB24858.1| unnamed protein product [Mus musculus] 39 0.017
pir||B40505 hypothetical protein - suid herpesvirus 1 (strain In... 39 0.022
ref|ZP_00091205.1| COG0542: ATPases with chaperone activity, ATP... 39 0.022
>ref|NP_826571.1| hypothetical protein [Streptomyces avermitilis MA-4680]
gi|29609054|dbj|BAC73106.1| hypothetical protein
[Streptomyces avermitilis MA-4680]
Length = 369
Score = 40.4 bits (93), Expect = 0.006
Identities = 27/68 (39%), Positives = 29/68 (41%)
Frame = +2
Query: 158 PAARGWRSHVHTARFPAPLGPRSEQATSRIIAQAVPPSRGAPARAVGAEALVAPVAPTVP 337
P A+ R H T P GP S AT+ A AVP GAP A APTVP
Sbjct: 287 PRAQDRRRHRETTAVPLDAGPNSNAATTAPGAAAVP---GAPTATAAPSVPTATAAPTVP 343
Query: 338 RCDAFQSA 361
A SA
Sbjct: 344 GATAAPSA 351
>ref|NP_628191.1| putative bifunctional protein (histidine kinase and regulator)
[Streptomyces coelicolor A3(2)]
gi|13122173|emb|CAC32349.1| putative bifunctional protein
(histidine kinase and regulator) [Streptomyces coelicolor
A3(2)]
Length = 1463
Score = 32.7 bits (73), Expect(2) = 0.014
Identities = 22/68 (32%), Positives = 26/68 (37%), Gaps = 12/68 (17%)
Frame = -2
Query: 419 T*ASAPRTRRGGSE-----------PRTSSWPTERR-RSEGPLAPPGQPVPPRPPLELAL 276
T A APR G++ P WP + G PPG PVPP A
Sbjct: 967 TEAQAPRPAESGADTAAPAAPGQPAPAPQPWPAAADIQGAGAPVPPGSPVPPGAAPAPAA 1026
Query: 275 PATAAPPE 252
PA A P+
Sbjct: 1027 PAAPAAPQ 1034
Score = 25.4 bits (54), Expect(2) = 0.014
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
Frame = -1
Query: 171 PRAAGTLPSTSGWLLDGNASDWRVASIK--------SRSGLRLQVCSSTP 46
PRAA LP+ + +D N++ R S++ +R +++Q S+TP
Sbjct: 1055 PRAAQPLPAEASAPVDPNSTQGRAISVRTLGQGVPFNRQAVQVQQPSATP 1104
>dbj|BAB24858.1| unnamed protein product [Mus musculus]
Length = 164
Score = 38.9 bits (89), Expect = 0.017
Identities = 32/109 (29%), Positives = 42/109 (38%)
Frame = -1
Query: 342 QRGTVGATGATSASAPTARAGAPRDGGTA*AMMRLVACSDRGPSGAGNLAVCTWLRQPRA 163
+R A G S +A +AR+ P PSG + + W R
Sbjct: 20 RRSLCAACGLGSPAAASARSSPPPP-----------------PSGRPSASPAPWPPNTRR 62
Query: 162 AGTLPSTSGWLLDGNASDWRVASIKSRSGLRLQVCSSTPGDSGVKMNSP 16
+ S SGWL G S WR A + R G R Q S P D+ + SP
Sbjct: 63 SS---SRSGWLPPGGPSRWRAAGSRLR-GARFQPWSQAPRDTAGRTGSP 107
>pir||B40505 hypothetical protein - suid herpesvirus 1 (strain Indiana-Funkhuser
or Becker) gi|334068|gb|AAA47468.1| ORF2
Length = 1958
Score = 38.5 bits (88), Expect = 0.022
Identities = 23/48 (47%), Positives = 24/48 (49%), Gaps = 3/48 (6%)
Frame = +1
Query: 253 SGGAAVAGSASSSGGRGGTG---CPGGANGPSLRRLSVGQELVRGSEP 387
+GGA AG A GGRGG G PG A GP L R E RG P
Sbjct: 1872 AGGAGGAGGAGGGGGRGGCGGGRAPGAAGGPGLCRC----ECCRGRRP 1915
>ref|ZP_00091205.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
[Azotobacter vinelandii]
Length = 1082
Score = 38.5 bits (88), Expect = 0.022
Identities = 31/82 (37%), Positives = 36/82 (43%)
Frame = -2
Query: 401 RTRRGGSEPRTSSWPTERRRSEGPLAPPGQPVPPRPPLELALPATAAPPEQ*CDWWLAQT 222
R RR +PR S R G PP +P RPPL AAP Q +A++
Sbjct: 146 RARRHPPDPRPSGAGAGRGVPAGRRRPPATRLPGRPPLRPGPGLRAAPAGQWRPAAVARS 205
Query: 221 VGRAAQETSRCAHGSASPALLG 156
G AA E R SA PAL G
Sbjct: 206 PGAAAAELER---RSAPPALRG 224
