Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003300A_C01 KCC003300A_c01
(603 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00090726.1| COG1299: Phosphotransferase system, fructose-... 46 5e-04
gb|AAC82365.1| unknown [Myxococcus xanthus] 45 8e-04
ref|XP_310434.1| ENSANGP00000005649 [Anopheles gambiae] gi|21293... 45 0.001
ref|ZP_00091118.1| COG0532: Translation initiation factor 2 (IF-... 44 0.002
ref|ZP_00092697.1| COG1020: Non-ribosomal peptide synthetase mod... 43 0.003
>ref|ZP_00090726.1| COG1299: Phosphotransferase system, fructose-specific IIC component
[Azotobacter vinelandii]
Length = 922
Score = 45.8 bits (107), Expect = 5e-04
Identities = 39/118 (33%), Positives = 48/118 (40%), Gaps = 3/118 (2%)
Frame = +1
Query: 259 KHGPARRAGGPQLPARSHPHGDRQRAATARTPG---RAQPAAAGSGACAAHERQRPRLRA 429
+ GPA R+G L ++ G + R G RA PA G ACAA R+R
Sbjct: 180 RRGPACRSGAGALAGQAERGGTGRGPRRRRERGAGRRAAPARPGRRACAAVARRRRSQLV 239
Query: 430 RGGRRAQRRLRLAGLRAACVWGRQRSGADRRAHVAQQVPTRLPRGTLAVQHVHRGHRH 603
R G R G+ A GR RR A++ P R RG H GHRH
Sbjct: 240 RSGYRP------GGVPAQ---GRGGQHGGRRRFAARRDPARSARGLAGRAHPAPGHRH 288
Score = 31.6 bits (70), Expect = 9.0
Identities = 29/96 (30%), Positives = 33/96 (34%)
Frame = +1
Query: 277 RAGGPQLPARSHPHGDRQRAATARTPGRAQPAAAGSGACAAHERQRPRLRARGGRRAQRR 456
R GG R HG R+R A R P R+ AG AH R R GG R
Sbjct: 244 RPGGVPAQGRGGQHGGRRRFAARRDPARSARGLAG----RAHPAPGHRHRRPGGHPTGLR 299
Query: 457 LRLAGLRAACVWGRQRSGADRRAHVAQQVPTRLPRG 564
G A G R H+A + RG
Sbjct: 300 HPRPGTVGA-------PGGGRHGHLAGLIRHNKKRG 328
>gb|AAC82365.1| unknown [Myxococcus xanthus]
Length = 542
Score = 45.1 bits (105), Expect = 8e-04
Identities = 50/164 (30%), Positives = 67/164 (40%), Gaps = 16/164 (9%)
Frame = +3
Query: 156 RLSYASSLGKRC-SPASGAACAPS--ERQPHTWEMLTQARACTPRWRPAATGAKSSSWRQ 326
R + A G+RC +P+ A P+ R+ T R CTP P A+ S+
Sbjct: 78 RPTCARRSGRRCPAPSRHARRNPAGPSRRCGPPRKSTPTRCCTPCPAPPRCRARPSAPAP 137
Query: 327 TASSYCPYARPCTTCCGWVWSMCCS*AP-----AAPTACAWRAPCPAPVASGW------- 470
+A CP A P + G + C AP A + ++P PAP +SG
Sbjct: 138 SAGRTCPTAGPSSCASGCCPTGRCGSAPGPTPHGAEPSPPSQSPSPAPASSGGRRRTHPR 197
Query: 471 TSSCLCLGQTAQRC-RSPRPCGTTGTD*TAARYACGTTRASWTP 599
+ G TA C PR CG GT AR A +T AS P
Sbjct: 198 PARASAAGATAPACLPPPRCCGRPGTG--CARTAPPSTSASHPP 239
>ref|XP_310434.1| ENSANGP00000005649 [Anopheles gambiae] gi|21293904|gb|EAA06049.1|
ENSANGP00000005649 [Anopheles gambiae str. PEST]
Length = 327
Score = 44.7 bits (104), Expect = 0.001
Identities = 48/167 (28%), Positives = 63/167 (36%), Gaps = 18/167 (10%)
Frame = +3
Query: 156 RLSYASSLGKRCSPASGAACAPSERQPHTWEMLTQARACTPR----WRPAAT-------G 302
R + S R P + + P+ T ARA R W +AT
Sbjct: 125 RCTLRSRFRTRSRPVTSVSACPARWARTARRTSTSARAIRARTARAWTASATIRASATRA 184
Query: 303 AKSSSWRQTASSYCPYARPCT-------TCCGWVWSMCCS*APAAPTACAWRAPCPAPVA 461
+K + R+T +S R CT T + C + A PT+ APC A A
Sbjct: 185 SKGRTARRTLTSVSSTGRACTARAWMAATTTSATATGCGAARTARPTSNTLPAPCRASSA 244
Query: 462 SGWTSSCLCLGQTAQRCRSPRPCGTTGTD*TAARYACGTTRASWTPT 602
+ TSS G R RS PC TT T R + TRA+ T T
Sbjct: 245 AWRTSSSTGSGCCRARSRSSPPC-TTSTRAAPGRRSASRTRATRTAT 290
>ref|ZP_00091118.1| COG0532: Translation initiation factor 2 (IF-2; GTPase)
[Azotobacter vinelandii]
Length = 1459
Score = 43.9 bits (102), Expect = 0.002
Identities = 42/123 (34%), Positives = 48/123 (38%), Gaps = 1/123 (0%)
Frame = +1
Query: 229 DSPIRGKC*LKHGPARRAGGPQLPARSHPHGDRQRAAT-ARTPGRAQPAAAGSGACAAHE 405
+SP G+ P RR G P A HP GDR R T AR G +P +G H
Sbjct: 68 ESPAPGRRQFDARPCRRHG-PPTAAAGHPRGDRARRRTGARAAGGGRPELRPAGRATGH- 125
Query: 406 RQRPRLRARGGRRAQRRLRLAGLRAACVWGRQRSGADRRAHVAQQVPTRLPRGTLAVQHV 585
RAR G A +R AG +R ADR H A PR A
Sbjct: 126 ------RARRGPGAAGTVRRAGADPL-----RRRAADRGGHPAPPAGAGRPR---APGPA 171
Query: 586 HRG 594
HRG
Sbjct: 172 HRG 174
Score = 35.8 bits (81), Expect = 0.48
Identities = 39/119 (32%), Positives = 44/119 (36%), Gaps = 6/119 (5%)
Frame = +1
Query: 265 GPARRAGGPQLPARSHPHGDRQRA-ATARTPGRAQPAAAGSGACAAHERQRPRLRARGGR 441
G RRAG L R+ G A A P PA G G RPR R GGR
Sbjct: 135 GTVRRAGADPLRRRAADRGGHPAPPAGAGRPRAPGPAHRGPGRSQRLRADRPRCRRAGGR 194
Query: 442 RAQRRLRLAGLRAACVWGRQRSGADRRAHVAQQVPTRLPRGTLAVQ-----HVHRGHRH 603
RR + RAA R G R A++ P RL + Q HR RH
Sbjct: 195 --HRRAQGRQPRAA----RHLRGQHRHPRGARRAPGRLAGAAVQRQCPGRVLPHRRDRH 247
>ref|ZP_00092697.1| COG1020: Non-ribosomal peptide synthetase modules and related
proteins [Azotobacter vinelandii]
Length = 4332
Score = 43.1 bits (100), Expect = 0.003
Identities = 37/99 (37%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Frame = +1
Query: 280 AGGPQLPARSHPHGDRQRAATARTPGRA---QPAAAGSGACAAHERQRPRLRARGGRRAQ 450
AG P R+ GD++ R GRA +PA G AA R R RGGR A
Sbjct: 1414 AGRAAQPLRADRDGDQRHPLALRGRGRAGADRPAVGQRGLRAARRRTGTGARRRGGRTAA 1473
Query: 451 RRLRLAGLRAACVWGRQ----RSGADRRAHVAQQVPTRL 555
RR R G R + G R+G RRA V Q+ P L
Sbjct: 1474 RRQR-PGARLSGASGADRRALRAGRGRRAAVPQRRPGAL 1511
Score = 36.2 bits (82), Expect = 0.37
Identities = 32/85 (37%), Positives = 38/85 (44%)
Frame = -2
Query: 521 RRSAPLRCLPQTQAARSPARRNRRWARRPPRARSRGRWRS*AAHAPDPAAAGCARPGVRA 342
RRS P R PQ + R PA + A RPPR + R A + A AG A +R
Sbjct: 1576 RRSGPGRT-PQARPGRQPAGVHGAGAVRPPRRAAADADRQ--AGSQGAAGAGLAGGRIRR 1632
Query: 341 VAARCLSP*G*LRAGSCGPPARRAG 267
A R + G AG G ARR G
Sbjct: 1633 SARRARTAPGGDLAGGAGLAARRPG 1657
Score = 33.9 bits (76), Expect = 1.8
Identities = 29/77 (37%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 256 LKHGPARRAGGPQLPARSHPHGDRQRAATARTPGRA-QPAAAGSGACAAHERQRPRLRAR 432
L+ GPA P+ PA P RQ A GRA +P A +G A R P A
Sbjct: 1766 LRDGPAGADPAPRDPAHHLPQRRRQALAAG---GRAIRPVHAAAGPVLAAGRPAPGAPAG 1822
Query: 433 GGRRAQRRLRLAGLRAA 483
GRRA G RAA
Sbjct: 1823 TGRRAGAPALRPGARAA 1839
Score = 32.0 bits (71), Expect = 6.9
Identities = 36/106 (33%), Positives = 41/106 (37%), Gaps = 7/106 (6%)
Frame = +1
Query: 265 GPARRAGGPQLPARSHPHGDRQRAATARTPGRAQPAAA---GSGACAAHERQRPRLRARG 435
GPA RA G R+ GD Q A AR A PA A G+ + RP RG
Sbjct: 1002 GPAVRAAGRGAGRRAAVRGDVQPPA-ARPGSAAPPAGAARRGTALAQPRGQVRPATAQRG 1060
Query: 436 GRRAQR----RLRLAGLRAACVWGRQRSGADRRAHVAQQVPTRLPR 561
G RLRL +RA RQR + R R PR
Sbjct: 1061 GPPGAYPPVFRLRLRTVRA-----RQRRASRRAFRAPAGTDRREPR 1101
Score = 32.0 bits (71), Expect = 6.9
Identities = 28/75 (37%), Positives = 33/75 (43%), Gaps = 7/75 (9%)
Frame = +1
Query: 265 GPARRAGGPQLPARSHPHGDRQRAATARTPGRAQPAAAGSGACAAHERQR----PRLRAR 432
G RRAG P L + RAA AR PG+ + A G A R R R+R R
Sbjct: 1822 GTGRRAGAPALRPGA-------RAAAARVPGKGRRTQALPGGDPAPHRHRRLGDGRVRPR 1874
Query: 433 GG---RRAQRRLRLA 468
G R RR R+A
Sbjct: 1875 TGGALRGVPRRARIA 1889
Score = 32.0 bits (71), Expect = 6.9
Identities = 23/72 (31%), Positives = 29/72 (39%)
Frame = +1
Query: 262 HGPARRAGGPQLPARSHPHGDRQRAATARTPGRAQPAAAGSGACAAHERQRPRLRARGGR 441
H P + G P+L P R P RA G G A R+R + GG
Sbjct: 1148 HRPGQWRGDPRLHRPGAP-----RQPPGAPPARAGRRPGGEGRPAGRTRRRTDGGSAGGG 1202
Query: 442 RAQRRLRLAGLR 477
+ +RRLR G R
Sbjct: 1203 QGRRRLRADGRR 1214
