KCC003266A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003266A_C01 KCC003266A_c01
ccacgaagcacgtccgcgagaaggaaatcaagcggcagacgctattagagctggtggact
acgccaactccggggctggaAAGTTCACGGAGGGCGTCTCGGAGGATATCATCTACATGC
TCAGCAACAACCTGTTCAGGACGCTGCCCCCGGTCCGGAGCCATGGCGATGCAGAGGGCA
ACTACGACGCGGAGGAGGAGGAGCCCAGCCTGGACCCCGCGTGGCCCCACCTGCAGATCG
TCTACGAGTTCCTCCTGCGCTACGTGGTGTCCAATGACACGGACGCCAAGATAGCGAAGA
AGTACATCGACCAGCAGTTCGTTCTGAAGCTGCTGGAGCTGTTCGACTCGGAGGACCCCC
GGGAACGCGACTACCTCAAAACGATCCTGCACCGCATATATGGCAAATTCATGGTGCACC
GGCCGTTCATTCGCAAGGCCATCAACAACGTCTTCTACCGCTTCATCTTCGAGACGGAGC
GGCACAACGGCGTGGCGGAGCTGCTCGAAATCCTCGGCAGCATCATTAACGGGTTCGCGC
TGCCGCTGAAGGAGGAGCACAAGCTGTTCCTGCAACGCGCGCTGATGCCGCTTCACAAGC
CT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003266A_C01 KCC003266A_c01
         (602 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_187599.1| B' regulatory subunit of PP2A (AtB'beta) [Arabi...   305  2e-82
emb|CAC85922.1| putative protein phosphatase 2A B'teta subunit [...   305  3e-82
ref|NP_195967.1| B' regulatory subunit of PP2A (AtB'alpha) [Arab...   303  2e-81
emb|CAD41394.1| OJ000223_09.7 [Oryza sativa (japonica cultivar-g...   302  3e-81
gb|AAM61625.1| B  regulatory subunit of protein phosphatase 2A, ...   297  7e-80

>ref|NP_187599.1| B' regulatory subunit of PP2A (AtB'beta) [Arabidopsis thaliana]
           gi|2160692|gb|AAB58901.1| B' regulatory subunit of PP2A
           [Arabidopsis thaliana]
           gi|6681331|gb|AAF23248.1|AC015985_6 B' regulatory
           subunit of PP2A (AtB'beta) [Arabidopsis thaliana]
           gi|18176455|gb|AAL60047.1| putative B' regulatory
           subunit of PP2A AtB'beta [Arabidopsis thaliana]
           gi|21280992|gb|AAM44900.1| putative B' regulatory
           subunit of PP2A AtB'beta [Arabidopsis thaliana]
          Length = 499

 Score =  305 bits (782), Expect = 2e-82
 Identities = 145/199 (72%), Positives = 169/199 (84%)
 Frame = +3

Query: 6   KHVREKEIKRQTLLELVDYANSGAGKFTEGVSEDIIYMLSNNLFRTLPPVRSHGDAEGNY 185
           K+ R+KEIKRQTLLELVD+  SG+ K +E   E++I M+S N+FR+LPP       +   
Sbjct: 105 KNARDKEIKRQTLLELVDFIQSGSSKISESCQEEMIKMISVNIFRSLPPASHENTGQEPA 164

Query: 186 DAEEEEPSLDPAWPHLQIVYEFLLRYVVSNDTDAKIAKKYIDQQFVLKLLELFDSEDPRE 365
           D EEEEP L+P+WPHLQ+VYE LLRYVVS DTD K+AK+YID  FVLKLL+LFDSEDPRE
Sbjct: 165 DPEEEEPYLEPSWPHLQLVYELLLRYVVSTDTDTKVAKRYIDHSFVLKLLDLFDSEDPRE 224

Query: 366 RDYLKTILHRIYGKFMVHRPFIRKAINNVFYRFIFETERHNGVAELLEILGSIINGFALP 545
           R+YLKTILHRIYGKFMVHRPFIRKAINN+FYRFI+ETERH+G+ ELLEILGSIINGFALP
Sbjct: 225 REYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALP 284

Query: 546 LKEEHKLFLQRALMPLHKP 602
           +KEEHKLFL R L+PLHKP
Sbjct: 285 MKEEHKLFLIRVLIPLHKP 303

>emb|CAC85922.1| putative protein phosphatase 2A B'teta subunit [Oryza sativa
           (japonica cultivar-group)]
          Length = 516

 Score =  305 bits (781), Expect = 3e-82
 Identities = 147/200 (73%), Positives = 168/200 (83%)
 Frame = +3

Query: 3   TKHVREKEIKRQTLLELVDYANSGAGKFTEGVSEDIIYMLSNNLFRTLPPVRSHGDAEGN 182
           TK V+EKEIKRQTLLELVDY  S  GKF E   +++I M+S NLFR   P         +
Sbjct: 119 TKDVKEKEIKRQTLLELVDYVTSATGKFPEPAVQEVIKMVSTNLFRVPNPAPRENKPLES 178

Query: 183 YDAEEEEPSLDPAWPHLQIVYEFLLRYVVSNDTDAKIAKKYIDQQFVLKLLELFDSEDPR 362
           +D EEEEP +DPAWPHLQIVYE  LR+V S +TDAK+AK+Y+D  F++KLL+LFDSEDPR
Sbjct: 179 FDMEEEEPVMDPAWPHLQIVYELFLRFVQSPETDAKLAKRYVDHGFIIKLLDLFDSEDPR 238

Query: 363 ERDYLKTILHRIYGKFMVHRPFIRKAINNVFYRFIFETERHNGVAELLEILGSIINGFAL 542
           ER+YLKTILHRIYGKFMVHRPFIRKAINN+FYRFIFETE+HNG+AELLEILGSIINGFAL
Sbjct: 239 EREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGIAELLEILGSIINGFAL 298

Query: 543 PLKEEHKLFLQRALMPLHKP 602
           PLKEEHKLFL RAL+PLHKP
Sbjct: 299 PLKEEHKLFLVRALIPLHKP 318

>ref|NP_195967.1| B' regulatory subunit of PP2A (AtB'alpha) [Arabidopsis thaliana]
           gi|11291677|pir||T48372 AtB'alpha regulatory subunit of
           PP2A - Arabidopsis thaliana gi|2160690|gb|AAB58900.1| B'
           regulatory subunit of PP2A [Arabidopsis thaliana]
           gi|7378631|emb|CAB83307.1| AtB'alpha regulatory subunit
           of PP2A [Arabidopsis thaliana]
           gi|27754602|gb|AAO22747.1| unknown protein [Arabidopsis
           thaliana]
          Length = 495

 Score =  303 bits (775), Expect = 2e-81
 Identities = 142/199 (71%), Positives = 170/199 (85%)
 Frame = +3

Query: 6   KHVREKEIKRQTLLELVDYANSGAGKFTEGVSEDIIYMLSNNLFRTLPPVRSHGDAEGNY 185
           K+ REKEIKRQTLLELVD+  SGAGK TE   E+++ M+S N+FR LPP       +   
Sbjct: 105 KNAREKEIKRQTLLELVDFIQSGAGKLTEVCQEEMVKMISVNIFRCLPPASHENTGQEPA 164

Query: 186 DAEEEEPSLDPAWPHLQIVYEFLLRYVVSNDTDAKIAKKYIDQQFVLKLLELFDSEDPRE 365
           D EEEEP L+P+WPHLQ++YE LLRY+V +DTD K+AK+YID  FVL+LLELF++EDPRE
Sbjct: 165 DLEEEEPYLEPSWPHLQLIYELLLRYIVPSDTDTKVAKRYIDHSFVLRLLELFETEDPRE 224

Query: 366 RDYLKTILHRIYGKFMVHRPFIRKAINNVFYRFIFETERHNGVAELLEILGSIINGFALP 545
           R+YLKTILHRIYGKFMVHRPFIRKA+N++FYRFI+ETERH+G+ ELLEILGSIINGFALP
Sbjct: 225 REYLKTILHRIYGKFMVHRPFIRKAMNHIFYRFIYETERHSGIGELLEILGSIINGFALP 284

Query: 546 LKEEHKLFLQRALMPLHKP 602
           +KEEHKLFL RAL+PLHKP
Sbjct: 285 MKEEHKLFLIRALIPLHKP 303

>emb|CAD41394.1| OJ000223_09.7 [Oryza sativa (japonica cultivar-group)]
           gi|32488487|emb|CAE03158.1| OSJNBa0081L15.20 [Oryza
           sativa (japonica cultivar-group)]
          Length = 509

 Score =  302 bits (773), Expect = 3e-81
 Identities = 148/200 (74%), Positives = 167/200 (83%)
 Frame = +3

Query: 3   TKHVREKEIKRQTLLELVDYANSGAGKFTEGVSEDIIYMLSNNLFRTLPPVRSHGDAEGN 182
           TK+++EKE KRQTL+ELVDY  S  GKF+E V  +I  M+S NLFR+  P      A   
Sbjct: 108 TKNLKEKETKRQTLMELVDYVTSANGKFSEVVMSEITKMVSINLFRSSSPTPRENKAIEG 167

Query: 183 YDAEEEEPSLDPAWPHLQIVYEFLLRYVVSNDTDAKIAKKYIDQQFVLKLLELFDSEDPR 362
            D EEEEP +DPAW HLQIVYE  LR+V S +TDAK+AK+YID  F+L+LL+LFDSEDPR
Sbjct: 168 VDLEEEEPLMDPAWSHLQIVYEVFLRFVASQETDAKLAKRYIDHSFILRLLDLFDSEDPR 227

Query: 363 ERDYLKTILHRIYGKFMVHRPFIRKAINNVFYRFIFETERHNGVAELLEILGSIINGFAL 542
           ERDYLKTILHRIYGKFMVHRPFIRKAINN+FYRFIFETE+HNGVAELLEILGSIINGFAL
Sbjct: 228 ERDYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGVAELLEILGSIINGFAL 287

Query: 543 PLKEEHKLFLQRALMPLHKP 602
           PLKEEHKLFL RAL+PLHKP
Sbjct: 288 PLKEEHKLFLVRALIPLHKP 307

>gb|AAM61625.1| B  regulatory subunit of protein phosphatase 2A, putative
           [Arabidopsis thaliana]
          Length = 492

 Score =  297 bits (761), Expect = 7e-80
 Identities = 142/200 (71%), Positives = 168/200 (84%)
 Frame = +3

Query: 3   TKHVREKEIKRQTLLELVDYANSGAGKFTEGVSEDIIYMLSNNLFRTLPPVRSHGDAEGN 182
           TK+V+EK+IKRQTLLELVDY  S  GKF+E V ++++ M+S N+FRTL P          
Sbjct: 105 TKNVKEKDIKRQTLLELVDYVASPNGKFSETVIQEVVRMVSVNIFRTLNPQPRENKVIDA 164

Query: 183 YDAEEEEPSLDPAWPHLQIVYEFLLRYVVSNDTDAKIAKKYIDQQFVLKLLELFDSEDPR 362
            D EEEEPS+DP WPHLQ+VYE LLR + S +TD K+AKKYIDQ FV +LL+LFDSEDPR
Sbjct: 165 LDLEEEEPSMDPTWPHLQLVYEILLRLIASPETDTKLAKKYIDQSFVSRLLDLFDSEDPR 224

Query: 363 ERDYLKTILHRIYGKFMVHRPFIRKAINNVFYRFIFETERHNGVAELLEILGSIINGFAL 542
           ERD LKT+LHRIYGKFMVHRPFIRK+INN+FYRF+FETE+HNG+AE LEILGSIINGFAL
Sbjct: 225 ERDCLKTVLHRIYGKFMVHRPFIRKSINNIFYRFVFETEKHNGIAEFLEILGSIINGFAL 284

Query: 543 PLKEEHKLFLQRALMPLHKP 602
           PLK+EHK+FL RAL+PLHKP
Sbjct: 285 PLKDEHKVFLVRALVPLHKP 304



EST assemble image


clone accession position
1 LCL063a08_r AV629664 1 413
2 MXL020e06_r BP094281 148 602




Chlamydomonas reinhardtii
Kazusa DNA Research Institute