KCC003236A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003236A_C01 KCC003236A_c01
ctcagccgcatacaaactgtgcagccatcactgttgcataggagtttagggcctcgactt
gtcagctttggctcgttctgGCCGCACAGCAATTCTAGGTCTTGCTTGAATCTATTTTTA
TTGATTACGTGGCTTAAGAGGCCCTTGACGGTGGCAGGGCGTGCACACAAACTGGCCCTG
CGTTGGCGGACCTTATGCATTTGACGCTGCCACACGGCATAAGAAGCGCTAGCTTTCTCG
CATCCTCAGGCTTTCTGCGAGCGAGCGGCGGCACCGCGCTCTTGCTCAGCGACCTGCTCG
GCACGCAGCCGCAGGCCATCGCCATACGCAGCCAGGAGCTCCCGGTGGCCAGCACGAGCC
GACCGGAGGACAGCGCGCGCCTGGGGCCTTCTGTTGACGTCATACGCACATCGCTGCTCG
GCGTGGGCGCCCCGTTGGGCGGCCGGCTCCCGGCAGTGGCAATTAGCATGACCACCCTGC
GGCCTGCGCCGGCGATGCAGGGCGGCAAGAAACGGTCGCAGCAACAACAACAACAACAAC
AACAACAGCAGCCGCATCAGCAACCGGCTCAGGAGAAAGGCCACACTTCGCAGGAGCAAC
AGCAGCAGCATTATAGGATGGAGCACGGCGTCAGCCCCACCAGCTCGGAACTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003236A_C01 KCC003236A_c01
         (653 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAB05810.1| super cysteine rich protein; SCRP [Homo sapiens]        60  4e-08
pir||T13998 gene mastermind protein - fruit fly (Drosophila viri...    55  7e-07
ref|XP_328885.1| predicted protein [Neurospora crassa] gi|289210...    55  9e-07
ref|NP_523657.1| Hairy/E(spl)-related with YRPW motif CG11194-PA...    54  2e-06
ref|NP_726905.1| CG32778-PA [Drosophila melanogaster] gi|2283166...    54  2e-06

>gb|AAB05810.1| super cysteine rich protein; SCRP [Homo sapiens]
          Length = 46

 Score = 59.7 bits (143), Expect = 4e-08
 Identities = 19/31 (61%), Positives = 19/31 (61%)
 Frame = -2

Query: 610 CCCCCSCEVWPFS*AGC*CGCCCCCCCCCCC 518
           CCCCC C         C C CCCCCCCCCCC
Sbjct: 11  CCCCCCC---------CCCCCCCCCCCCCCC 32

 Score = 59.7 bits (143), Expect = 4e-08
 Identities = 19/31 (61%), Positives = 19/31 (61%)
 Frame = -2

Query: 610 CCCCCSCEVWPFS*AGC*CGCCCCCCCCCCC 518
           CCCCC C         C C CCCCCCCCCCC
Sbjct: 12  CCCCCCC---------CCCCCCCCCCCCCCC 33

 Score = 56.2 bits (134), Expect = 4e-07
 Identities = 19/36 (52%), Positives = 19/36 (52%)
 Frame = -2

Query: 625 CSIL*CCCCCSCEVWPFS*AGC*CGCCCCCCCCCCC 518
           C    CCCCC C         C C CCCCCCC CCC
Sbjct: 11  CCCCCCCCCCCC---------CCCCCCCCCCCFCCC 37

 Score = 50.1 bits (118), Expect = 3e-05
 Identities = 16/25 (64%), Positives = 17/25 (68%)
 Frame = -2

Query: 592 CEVWPFS*AGC*CGCCCCCCCCCCC 518
           CE+ P     C C CCCCCCCCCCC
Sbjct: 2   CELCPDRSRCCCCCCCCCCCCCCCC 26

>pir||T13998 gene mastermind protein - fruit fly (Drosophila virilis)
           gi|157834|gb|AAC37201.1| mastermind
          Length = 1655

 Score = 55.5 bits (132), Expect = 7e-07
 Identities = 24/56 (42%), Positives = 35/56 (61%)
 Frame = +3

Query: 459 AISMTTLRPAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEH 626
           A++ T+++  P + GG+ R QQQQQ QQ QQ   Q  Q + H   +QQQQH + +H
Sbjct: 345 ALTNTSVKSEPGVGGGRGRHQQQQQHQQHQQQQHQQQQHQQHQQHQQQQQHQQQQH 400

 Score = 39.3 bits (90), Expect = 0.052
 Identities = 17/31 (54%), Positives = 21/31 (66%)
 Frame = +3

Query: 510 KRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQ 602
           ++ QQ QQQQ QQQ HQQ  Q+  H  Q+QQ
Sbjct: 390 QQQQQHQQQQHQQQQHQQQQQQHHHQQQQQQ 420

 Score = 38.9 bits (89), Expect = 0.067
 Identities = 22/50 (44%), Positives = 28/50 (56%)
 Frame = +3

Query: 486  APAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEHGVS 635
            A A Q  +++ QQQQQQQQQQQ  QQ A       ++ QQ H   + G S
Sbjct: 902  ANATQQQQQQQQQQQQQQQQQQQQQQQATTTTLQMKQTQQLHISQQGGGS 951

 Score = 38.9 bits (89), Expect = 0.067
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +3

Query: 510 KRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQ 605
           K  QQQQ  QQQQQ  QQ  Q++ H +Q+QQQ
Sbjct: 767 KHLQQQQAMQQQQQQQQQQQQQQQHHAQQQQQ 798

 Score = 38.5 bits (88), Expect = 0.088
 Identities = 18/37 (48%), Positives = 23/37 (61%)
 Frame = +3

Query: 498 QGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQ 608
           Q  ++  QQQQ QQQQ Q  Q   Q++ H  Q+QQQQ
Sbjct: 384 QQHQQHQQQQQHQQQQHQQQQHQQQQQQHHHQQQQQQ 420

 Score = 38.1 bits (87), Expect = 0.11
 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
 Frame = +3

Query: 441 GRLPAVAISMTTLRPAPAMQGGKKRSQQQQQQQQQQQP-----HQQPAQEKG----HTSQ 593
           G LP    +      A A Q  +++ QQQQQQQQQQQ      HQQ  Q++     H  Q
Sbjct: 4   GGLPVFQSASQAAAAAVAQQQQQQQQQQQQQQQQQQQHLNLQLHQQHLQQQQSLGIHLQQ 63

Query: 594 EQQQQ 608
           +QQ Q
Sbjct: 64  QQQLQ 68

 Score = 37.4 bits (85), Expect = 0.20
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = +3

Query: 516 SQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEHGV 632
           +QQQQQQQQQQQ  QQ  Q++ H + +  QQH + +  +
Sbjct: 21  AQQQQQQQQQQQQQQQ--QQQQHLNLQLHQQHLQQQQSL 57

 Score = 37.0 bits (84), Expect = 0.26
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +3

Query: 507 KKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQ 602
           K   QQQ  QQQQQQ  QQ  Q++ H  Q+QQ
Sbjct: 767 KHLQQQQAMQQQQQQQQQQQQQQQHHAQQQQQ 798

 Score = 36.6 bits (83), Expect = 0.33
 Identities = 20/39 (51%), Positives = 24/39 (61%)
 Frame = +3

Query: 492 AMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQ 608
           A+ GG   +  QQQQQQQQQ  QQ  Q+     Q+QQQQ
Sbjct: 895 AVPGGNAANATQQQQQQQQQQQQQQQQQ-----QQQQQQ 928

 Score = 35.4 bits (80), Expect = 0.75
 Identities = 21/57 (36%), Positives = 30/57 (51%), Gaps = 13/57 (22%)
 Frame = +3

Query: 477 LRPAPAMQGGKKRSQQQQQQQQQQQPHQQPAQE-------------KGHTSQEQQQQ 608
           L+     Q  +++ QQQQQQQQQQQ H Q  Q+              G+ +++QQQQ
Sbjct: 766 LKHLQQQQAMQQQQQQQQQQQQQQQHHAQQQQQHPNGPNMGVPMGGAGNFAKQQQQQ 822

 Score = 35.4 bits (80), Expect = 0.75
 Identities = 21/40 (52%), Positives = 23/40 (57%)
 Frame = +3

Query: 492  AMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQH 611
            A Q G   SQQQ  QQQQQQ  QQP     +  Q+QQQ H
Sbjct: 975  AAQQGVFFSQQQAAQQQQQQ-QQQPGNAGPNPQQQQQQPH 1013

 Score = 35.0 bits (79), Expect = 0.97
 Identities = 18/35 (51%), Positives = 20/35 (56%)
 Frame = +3

Query: 504 GKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQ 608
           G ++ Q QQQQQ  QQ  QQ  Q  G   Q QQQQ
Sbjct: 662 GMQQQQPQQQQQAPQQQQQQHGQMMGGPGQGQQQQ 696

 Score = 34.7 bits (78), Expect = 1.3
 Identities = 21/45 (46%), Positives = 24/45 (52%)
 Frame = +3

Query: 483 PAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYR 617
           P   MQ  + + QQQ  QQQQQQ H Q     G   Q+QQQQ  R
Sbjct: 659 PPHGMQQQQPQQQQQAPQQQQQQ-HGQMMGGPGQGQQQQQQQQPR 702

 Score = 34.7 bits (78), Expect = 1.3
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +3

Query: 522 QQQQQQQQQQPHQQPAQEKGHTSQEQQQQH 611
           QQQQ  QQQQ  QQ  Q++     +QQQQH
Sbjct: 770 QQQQAMQQQQQQQQQQQQQQQHHAQQQQQH 799

 Score = 34.3 bits (77), Expect = 1.7
 Identities = 26/79 (32%), Positives = 37/79 (45%), Gaps = 21/79 (26%)
 Frame = +3

Query: 477  LRPAPAMQGGKKRSQQQQQQQQ----QQQPH-----------------QQPAQEKGHTSQ 593
            L+   AMQ  +++ QQQQQQQQ    QQQ H                 +Q  Q+     Q
Sbjct: 769  LQQQQAMQQQQQQQQQQQQQQQHHAQQQQQHPNGPNMGVPMGGAGNFAKQQQQQVPTPQQ 828

Query: 594  EQQQQHYRMEHGVSPTSSE 650
            +QQQQ  + +   SP S++
Sbjct: 829  QQQQQLQQQQQQYSPFSNQ 847

 Score = 33.9 bits (76), Expect = 2.2
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
 Frame = +3

Query: 519 QQQQQQQQQQQPH------QQPAQEKGHTSQEQQQQHYRMEHGV 632
           QQQQ Q QQQQ H      QQ  Q +    Q QQQQ  + +H +
Sbjct: 63  QQQQLQLQQQQQHNAQAQQQQQLQVQQQQQQRQQQQQQQQQHSL 106

 Score = 33.9 bits (76), Expect = 2.2
 Identities = 15/28 (53%), Positives = 20/28 (70%)
 Frame = +3

Query: 498 QGGKKRSQQQQQQQQQQQPHQQPAQEKG 581
           Q  +++ QQQQ QQQQQQ H Q  Q++G
Sbjct: 394 QHQQQQHQQQQHQQQQQQHHHQQQQQQG 421

 Score = 33.1 bits (74), Expect = 3.7
 Identities = 15/35 (42%), Positives = 21/35 (59%)
 Frame = +3

Query: 507 KKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQH 611
           +++ Q   Q QQQQQ   Q  Q++    Q+QQQQH
Sbjct: 70  QQQQQHNAQAQQQQQLQVQQQQQQRQQQQQQQQQH 104

 Score = 33.1 bits (74), Expect = 3.7
 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 19/65 (29%)
 Frame = +3

Query: 504  GKKRSQQQQQQQQQQQPH-------------------QQPAQEKGHTSQEQQQQHYRMEH 626
            G    QQQQQ QQQQQP                    QQ  Q++    Q+QQQQ  + + 
Sbjct: 869  GNMPQQQQQQPQQQQQPPRGPQSNPNAVPGGNAANATQQQQQQQQQQQQQQQQQQQQQQQ 928

Query: 627  GVSPT 641
              + T
Sbjct: 929  ATTTT 933

 Score = 32.3 bits (72), Expect = 6.3
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +3

Query: 507 KKRSQQQQQQQQQQQPHQQPAQEKG 581
           ++  QQQ QQQQQQ  HQQ  Q+ G
Sbjct: 398 QQHQQQQHQQQQQQHHHQQQQQQGG 422

 Score = 32.3 bits (72), Expect = 6.3
 Identities = 16/37 (43%), Positives = 23/37 (61%)
 Frame = +3

Query: 513 RSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRME 623
           + QQQ Q QQQQQ + Q  Q++    Q+QQQQ  + +
Sbjct: 62  QQQQQLQLQQQQQHNAQAQQQQQLQVQQQQQQRQQQQ 98

 Score = 32.0 bits (71), Expect = 8.2
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
 Frame = +3

Query: 498  QGGKKRSQQQQQ--------QQQQQQPH--QQPAQEKGHTSQEQQQQHYRMEHGVSPT 641
            Q  +++ QQQQQ        QQQQQQPH     A   G    +QQQ +  M +   P+
Sbjct: 986  QAAQQQQQQQQQPGNAGPNPQQQQQQPHGGNAGANGGGPNGPQQQQPNQNMNNSNVPS 1043

>ref|XP_328885.1| predicted protein [Neurospora crassa] gi|28921014|gb|EAA30336.1|
           predicted protein [Neurospora crassa]
          Length = 879

 Score = 55.1 bits (131), Expect = 9e-07
 Identities = 29/62 (46%), Positives = 37/62 (58%)
 Frame = +3

Query: 432 PLGGRLPAVAISMTTLRPAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQH 611
           PL  +L AV  +     P P  Q G+++ QQQQQQQQQQQ  QQ  Q++    Q+QQQQ 
Sbjct: 226 PLFQKLAAVPTTQPMTLPQPHHQPGQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 285

Query: 612 YR 617
            R
Sbjct: 286 TR 287

>ref|NP_523657.1| Hairy/E(spl)-related with YRPW motif CG11194-PA [Drosophila
           melanogaster] gi|5678825|gb|AAD46771.1|AF151523_1 hairy
           and enhancer of split related protein 1 [Drosophila
           melanogaster] gi|21627753|gb|AAF59152.2| CG11194-PA
           [Drosophila melanogaster]
          Length = 425

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 35/95 (36%), Positives = 48/95 (49%)
 Frame = +3

Query: 342 PVASTSRPEDSARLGPSVDVIRTSLLGVGAPLGGRLPAVAISMTTLRPAPAMQGGKKRSQ 521
           P  S S  + + +LG    V RTS    G+ +   LP+  +   +     + Q  +++ Q
Sbjct: 266 PTLSASPSQQAQQLGGRTSVSRTS----GSAVTESLPSHDLHSDS----SSQQQQQQQQQ 317

Query: 522 QQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEH 626
           QQQQQQ QQQ HQQ  Q    T Q  QQQHY  +H
Sbjct: 318 QQQQQQHQQQQHQQQQQRTQTTPQPTQQQHYTHDH 352

 Score = 37.4 bits (85), Expect = 0.20
 Identities = 34/128 (26%), Positives = 46/128 (35%)
 Frame = +3

Query: 267 GGTALLLSDLLGTQPQAIAIRSQELPVASTSRPEDSARLGPSVDVIRTSLLGVGAPLGGR 446
           GG +       G QP   A      P  S + P +      S   +  S       LGGR
Sbjct: 228 GGWSPAAPSSSGYQPNCAAA-----PYQSYAAPANPGAYVSSYPTLSASPSQQAQQLGGR 282

Query: 447 LPAVAISMTTLRPAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEH 626
                 S + +  +         S  QQQQQQ     QQ  Q++ H  Q+ QQQ  R + 
Sbjct: 283 TSVSRTSGSAVTESLPSHDLHSDSSSQQQQQQ----QQQQQQQQQHQQQQHQQQQQRTQT 338

Query: 627 GVSPTSSE 650
              PT  +
Sbjct: 339 TPQPTQQQ 346

>ref|NP_726905.1| CG32778-PA [Drosophila melanogaster] gi|22831660|gb|AAF45913.2|
           CG32778-PA [Drosophila melanogaster]
          Length = 942

 Score = 53.9 bits (128), Expect = 2e-06
 Identities = 26/64 (40%), Positives = 37/64 (57%)
 Frame = +3

Query: 456 VAISMTTLRPAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEHGVS 635
           +++ M   + A A    + + QQQQQQQQQQQ HQQ  Q++    Q+QQQQH +     +
Sbjct: 475 LSVKMAAAQAAAAAAAYQNQQQQQQQQQQQQQHHQQQQQQQQQQQQQQQQQHGKQSSSPA 534

Query: 636 PTSS 647
           P  S
Sbjct: 535 PNVS 538

 Score = 44.3 bits (103), Expect = 0.002
 Identities = 23/70 (32%), Positives = 35/70 (49%)
 Frame = +3

Query: 435 LGGRLPAVAISMTTLRPAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHY 614
           +G   P  +    +++ A A       + Q QQQQQQQQ  QQ   ++    Q+QQQQ  
Sbjct: 463 MGPLPPGFSAINLSVKMAAAQAAAAAAAYQNQQQQQQQQQQQQQHHQQQQQQQQQQQQQQ 522

Query: 615 RMEHGVSPTS 644
           + +HG   +S
Sbjct: 523 QQQHGKQSSS 532

 Score = 39.3 bits (90), Expect = 0.052
 Identities = 17/32 (53%), Positives = 24/32 (74%)
 Frame = +3

Query: 507 KKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQ 602
           +++ QQQQQQQQQQQ  QQ  Q++ HT  +Q+
Sbjct: 227 QQQQQQQQQQQQQQQQQQQQQQQQQHTLHQQR 258

 Score = 38.5 bits (88), Expect = 0.088
 Identities = 20/31 (64%), Positives = 22/31 (70%)
 Frame = +3

Query: 519 QQQQQQQQQQQPHQQPAQEKGHTSQEQQQQH 611
           QQQQQQQQQQQ  QQ  Q+     Q+QQQQH
Sbjct: 227 QQQQQQQQQQQQQQQQQQQ-----QQQQQQH 252

 Score = 33.5 bits (75), Expect = 2.8
 Identities = 20/57 (35%), Positives = 26/57 (45%)
 Frame = +3

Query: 483 PAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEHGVSPTSSEL 653
           P P+     +  QQQQQQQQQQQ  ++         Q+ +Q  Y   H     S EL
Sbjct: 268 PDPSANYHSEHQQQQQQQQQQQQADER--------QQQYEQMRYAQSHVSVGPSGEL 316

 Score = 33.1 bits (74), Expect = 3.7
 Identities = 19/57 (33%), Positives = 28/57 (48%), Gaps = 15/57 (26%)
 Frame = +3

Query: 498 QGGKKRSQQQQQQQQQQQPHQQPAQEKG---------------HTSQEQQQQHYRME 623
           Q  +++ QQQQQQQQQQQ      Q++G               H+  +QQQQ  + +
Sbjct: 232 QQQQQQQQQQQQQQQQQQQQHTLHQQRGPFIEGNDVPDPSANYHSEHQQQQQQQQQQ 288

 Score = 33.1 bits (74), Expect = 3.7
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 531 QQQQQQQPHQQPAQEKGHTSQEQQQQHYRMEHG 629
           QQQQQQQ  QQ  Q++    Q+QQQ     + G
Sbjct: 227 QQQQQQQQQQQQQQQQQQQQQQQQQHTLHQQRG 259

 Score = 32.0 bits (71), Expect = 8.2
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +3

Query: 411 SLLGVGAPLGGRLPAVAISMTTLRPAPAMQGGKKRSQQQQQQQQQQQPHQQPAQEKGHTS 590
           S + +   +     A A +    +     Q  +++   QQQQQQQQQ  QQ  Q+ G  S
Sbjct: 471 SAINLSVKMAAAQAAAAAAAYQNQQQQQQQQQQQQQHHQQQQQQQQQQQQQQQQQHGKQS 530



EST assemble image


clone accession position
1 MXL061h12_r BP096623 1 371
2 LCL051f11_r AV629081 143 653




Chlamydomonas reinhardtii
Kazusa DNA Research Institute