KCC003213A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003213A_C01 KCC003213A_c01
caatgccgcctgggcggcgtttgagagcatgcttaatgcCAAGGACCCGCGCCTGACGGC
CGTAGCCAACCAGATCATCGCGCTGATCATCAGCGACCACGTGCACGTGGGCGACTCGTA
CAATGCCAACGCCCTCACGAACGGCCAGATCATCCCCATCGGCATGGACCCCACCAAGTA
CATGGACGCAAACGCCACCACGGTGCGCGTGACCGTGAACGCGACCGGTGTGTTCCTGGC
GCACCAGGTGTCGGGTGCCAAGGTGCTGCGCACCATCCTCGCCGGCCCCACAGTCGTCAA
CATCATCGACAGCGTGCTGCTGAGCCGCGCCTCTGCGGCAGCGCTGGGTCTCATTGAGAT
GCCTTCAGCCTCCCCCACGCCCACCCCCACGCCCGTGCCCACTCCCAGCCCCGTGGCGGG
TGACACCATCCTGGGAGTCATCAGTGCCGACATCTCCCTGGCCGGCATTGGGCAACTGAT
TGCGCTTACTGGTCTGGCCGAGCCCCTGTCCGACCCCGATATCGAGTACACCCTGTTTGC
GC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003213A_C01 KCC003213A_c01
         (542 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC04036.1| unnamed protein product [Homo sapiens]                 55  8e-07
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (...    54  1e-06
pir||S22697 extensin - Volvox carteri (fragment) gi|21992|emb|CA...    52  5e-06
ref|NP_203248.1| unknown [Epiphyas postvittana nucleopolyhedrovi...    51  1e-05
gb|AAL39574.1| LD13887p [Drosophila melanogaster]                      50  3e-05

>dbj|BAC04036.1| unnamed protein product [Homo sapiens]
          Length = 279

 Score = 54.7 bits (130), Expect = 8e-07
 Identities = 51/165 (30%), Positives = 66/165 (39%), Gaps = 9/165 (5%)
 Frame = +3

Query: 66  PTRSSR*SSATTCTWATRTMPTPSRTARSSPSA-----WTPPSTWTQTPPRCA*--P*TR 224
           PT  +    A TC+  +RT+P  S  A SS  A     W PP +   +P  CA   P   
Sbjct: 14  PTTGAGSCCAGTCSSTSRTLPAVSPWASSSWRAALWSWWRPPRS---SPSLCALRGPGRA 70

Query: 225 PVCSWRTRCRVP-RCCAPSSPAPQSSTSSTACC*AAPLRQRWVSLRCLQPPPRPPPRPCP 401
           P C W  R R+P R  +     P S+T    C   +   + +V+  C  P P P P P P
Sbjct: 71  PTC-WPLRVRMPWRAGSRPCRVPASTTCGWWCASWSSSWRLYVAWPCPSPSPSPCPCPRP 129

Query: 402 LPAPWRVTPSWESSVPTSPWPALGN*LRLLVWPSPCPT-PISSTP 533
            P PW  +       P S              P PCP  P+ S P
Sbjct: 130 CPLPWPQSHPCLLPQPRSQ-------------PCPCPAGPVPSRP 161

>sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich
           glycoprotein 1) gi|12018147|gb|AAG45420.1|AF309494_1
           vegetative cell wall protein gp1 [Chlamydomonas
           reinhardtii]
          Length = 555

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 45/139 (32%), Positives = 58/139 (41%), Gaps = 3/139 (2%)
 Frame = +3

Query: 126 PTPSRTARSSPSAWTPPSTWTQTPPRCA*P*TRPVC--SWRTRCRVPRCCAPSSPAPQSS 299
           P+P+     SP+  +PPS    +PP  A P   P    S       P   AP SP P + 
Sbjct: 205 PSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAP 264

Query: 300 TSSTACC*AAPLRQRWVSLRCLQP-PPRPPPRPCPLPAPWRVTPSWESSVPTSPWPALGN 476
               +     P R  + +   + P PP PPP P P   P   +PS  S VP SP P   +
Sbjct: 265 PPPPSPPPPPPPRPPFPANTPMPPSPPSPPPSPAPPTPPTPPSPSPPSPVPPSPAPVPPS 324

Query: 477 *LRLLVWPSPCPTPISSTP 533
                  PSP P+P   TP
Sbjct: 325 PAPPSPAPSPPPSPAPPTP 343

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 41/134 (30%), Positives = 51/134 (37%)
 Frame = +3

Query: 126 PTPSRTARSSPSAWTPPSTWTQTPPRCA*P*TRPVCSWRTRCRVPRCCAPSSPAPQSSTS 305
           P P   A  SP    PP   +  PP    P  RP     T         P SPAP +  +
Sbjct: 249 PAPPSPAPPSPKPPAPPPPPSPPPP----PPPRPPFPANTPMPPSPPSPPPSPAPPTPPT 304

Query: 306 STACC*AAPLRQRWVSLRCLQPPPRPPPRPCPLPAPWRVTPSWESSVPTSPWPALGN*LR 485
             +    +P+      +     PP P P P P PAP   +PS   S   SP P+      
Sbjct: 305 PPSPSPPSPVPPSPAPVPPSPAPPSPAPSPPPSPAPPTPSPSPSPSPSPSPSPSPS---- 360

Query: 486 LLVWPSPCPTPISS 527
               PSP P+PI S
Sbjct: 361 --PSPSPSPSPIPS 372

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 40/138 (28%), Positives = 51/138 (35%)
 Frame = +3

Query: 111 ATRTMPTPSRTARSSPSAWTPPSTWTQTPPRCA*P*TRPVCSWRTRCRVPRCCAPSSPAP 290
           A   MP    +   SP+  TPP+  + +PP    P   PV              P SPAP
Sbjct: 282 ANTPMPPSPPSPPPSPAPPTPPTPPSPSPPSPVPPSPAPV--------------PPSPAP 327

Query: 291 QSSTSSTACC*AAPLRQRWVSLRCLQPPPRPPPRPCPLPAPWRVTPSWESSVPTSPWPAL 470
            S   S     A P            P P P P P P P+P   +PS   S   SP P+ 
Sbjct: 328 PSPAPSPPPSPAPP-----------TPSPSPSPSPSPSPSP---SPSPSPSPSPSPIPSP 373

Query: 471 GN*LRLLVWPSPCPTPIS 524
                    P P P+P++
Sbjct: 374 S--------PKPSPSPVA 383

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 43/136 (31%), Positives = 47/136 (33%)
 Frame = +3

Query: 126 PTPSRTARSSPSAWTPPSTWTQTPPRCA*P*TRPVCSWRTRCRVPRCCAPSSPAPQSSTS 305
           P+PS  A  SPS   PPS     PP  A P   P         VP   AP SP P S + 
Sbjct: 127 PSPSPPAPPSPS---PPSPAPPLPPSPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSP 183

Query: 306 STACC*AAPLRQRWVSLRCLQPPPRPPPRPCPLPAPWRVTPSWESSVPTSPWPALGN*LR 485
                                PP   PP P P   P    PS    VP SP P       
Sbjct: 184 PV-------------------PPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAP------- 217

Query: 486 LLVWPSPCPTPISSTP 533
               PSP P+P   +P
Sbjct: 218 ----PSP-PSPAPPSP 228

 Score = 38.9 bits (89), Expect = 0.045
 Identities = 43/136 (31%), Positives = 47/136 (33%)
 Frame = +3

Query: 126 PTPSRTARSSPSAWTPPSTWTQTPPRCA*P*TRPVCSWRTRCRVPRCCAPSSPAPQSSTS 305
           P P   A  SP    PPS    +PP  A P   P          P   AP SPAP S   
Sbjct: 58  PAPPSPAPPSPG---PPSPAPPSPPSPAPPSPAPPSP------APPSPAPPSPAPPSP-- 106

Query: 306 STACC*AAPLRQRWVSLRCLQPPPRPPPRPCPLPAPWRVTPSWESSVPTSPWPALGN*LR 485
                  AP      S     PP   PP P P   P    PS    +P SP P       
Sbjct: 107 -------APPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPAP------- 152

Query: 486 LLVWPSPCPTPISSTP 533
               PSP P P+  +P
Sbjct: 153 ----PSPSP-PVPPSP 163

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 13/19 (68%), Positives = 16/19 (83%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSPVA 418
           PS SP P+P+P P+PSPVA
Sbjct: 365 PSPSPIPSPSPKPSPSPVA 383

 Score = 33.1 bits (74), Expect = 2.5
 Identities = 11/17 (64%), Positives = 16/17 (93%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSP 412
           PS SP+P+P+P+P+PSP
Sbjct: 359 PSPSPSPSPSPIPSPSP 375

 Score = 32.3 bits (72), Expect = 4.2
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSPVAGDTILGVISADISLA 463
           PS SP+P+P P P+P P      + ++ AD ++A
Sbjct: 361 PSPSPSPSPIPSPSPKPSPSPVAVKLVWADDAIA 394

 Score = 32.3 bits (72), Expect = 4.2
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSPV 415
           PS SP+P+P+P P+PSP+
Sbjct: 353 PSPSPSPSPSPSPSPSPI 370

 Score = 31.2 bits (69), Expect = 9.3
 Identities = 11/17 (64%), Positives = 15/17 (87%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSP 412
           PS SP+P+P+P P+PSP
Sbjct: 345 PSPSPSPSPSPSPSPSP 361

 Score = 31.2 bits (69), Expect = 9.3
 Identities = 11/17 (64%), Positives = 15/17 (87%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSP 412
           PS SP+P+P+P P+PSP
Sbjct: 343 PSPSPSPSPSPSPSPSP 359

 Score = 31.2 bits (69), Expect = 9.3
 Identities = 11/17 (64%), Positives = 15/17 (87%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSP 412
           PS SP+P+P+P P+PSP
Sbjct: 351 PSPSPSPSPSPSPSPSP 367

 Score = 31.2 bits (69), Expect = 9.3
 Identities = 11/17 (64%), Positives = 15/17 (87%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSP 412
           PS SP+P+P+P P+PSP
Sbjct: 349 PSPSPSPSPSPSPSPSP 365

 Score = 31.2 bits (69), Expect = 9.3
 Identities = 11/17 (64%), Positives = 15/17 (87%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSP 412
           PS SP+P+P+P P+PSP
Sbjct: 347 PSPSPSPSPSPSPSPSP 363

>pir||S22697 extensin - Volvox carteri (fragment) gi|21992|emb|CAA46283.1|
           extensin [Volvox carteri]
          Length = 464

 Score = 52.0 bits (123), Expect = 5e-06
 Identities = 51/165 (30%), Positives = 59/165 (34%)
 Frame = +3

Query: 39  PRTRA*RP*PTRSSR*SSATTCTWATRTMPTPSRTARSSPSAWTPPSTWTQTPPRCA*P* 218
           PR     P P R S      T +   R + +PS    +SP     P T    PPR     
Sbjct: 226 PRVSTSPPPPARVSSSPPPATRSPPPRRITSPSPVLTASPPL---PKTSPPPPPRVPPSP 282

Query: 219 TRPVCSWRTRCRVPRCCAPSSPAPQSSTSSTACC*AAPLRQRWVSLRCLQPPPRPPPRPC 398
             PV S       P   +PS P PQ  +S                     PPP PPPRP 
Sbjct: 283 PPPVAS--PPPPPPPRVSPSPPPPQPVSS---------------------PPPPPPPRPS 319

Query: 399 PLPAPWRVTPSWESSVPTSPWPALGN*LRLLVWPSPCPTPISSTP 533
           P P P R +PS     P  P P           PSP P P  S+P
Sbjct: 320 PSPPPPRSSPSPPPPSPPPPSPPPPR-------PSPSPPPPRSSP 357

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 56/180 (31%), Positives = 69/180 (38%), Gaps = 4/180 (2%)
 Frame = +3

Query: 6   PPGRRLRACLMPRTRA*RP*PTRSSR*SSATTCT--WATRTMPTPSRTARSSPSAWTPPS 179
           PP  R+ +   P TR+  P P R +  S   T +      + P P R   S P     P 
Sbjct: 233 PPPARVSSSPPPATRS--PPPRRITSPSPVLTASPPLPKTSPPPPPRVPPSPPPPVASPP 290

Query: 180 TWTQTPPRCA*--P*TRPVCSWRTRCRVPRCCAPSSPAPQSSTSSTACC*AAPLRQRWVS 353
                PPR +   P  +PV S       P   +PS P P+SS S       +P       
Sbjct: 291 P--PPPPRVSPSPPPPQPVSS--PPPPPPPRPSPSPPPPRSSPSPPP---PSP------- 336

Query: 354 LRCLQPPPRPPPRPCPLPAPWRVTPSWESSVPTSPWPALGN*LRLLVWPSPCPTPISSTP 533
                PP  PPPRP P P P R +PS    V + P P            SP P P SS P
Sbjct: 337 ----PPPSPPPPRPSPSPPPPRSSPSPPPPVVSPPPPP--------PRASPPPPPASSPP 384

 Score = 39.7 bits (91), Expect = 0.026
 Identities = 36/119 (30%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
 Frame = +3

Query: 126 PTPSRTARSSPSAWTPPSTWTQTPPRCA*P*TRPVCSWRTRCRVPRCCAPSSPAPQSSTS 305
           P P R + S P   + PS    +PP  + P  RP              +PS P P+SS S
Sbjct: 313 PPPPRPSPSPPPPRSSPSPPPPSPPPPSPPPPRP--------------SPSPPPPRSSPS 358

Query: 306 STACC*AAPLRQRWVS-----LRCLQPPPRPPPRPCPLPAPWRVTPSWESSVPTSPWPA 467
                 + P      S          PPPRPPP   P P P    P+  ++ P SP P+
Sbjct: 359 PPPPVVSPPPPPPRASPPPPPASSPPPPPRPPP---PSPPPSPPPPATAAANPPSPAPS 414

 Score = 35.8 bits (81), Expect = 0.38
 Identities = 37/117 (31%), Positives = 44/117 (36%), Gaps = 1/117 (0%)
 Frame = +3

Query: 126 PTPSRTA-RSSPSAWTPPSTWTQTPPRCA*P*TRPVCSWRTRCRVPRCCAPSSPAPQSST 302
           P+PS    RSSPS   PP      PP  A P   P  S     R P    P SP P ++ 
Sbjct: 346 PSPSPPPPRSSPSP-PPPVVSPPPPPPRASPPPPPASSPPPPPRPPPPSPPPSPPPPATA 404

Query: 303 SSTACC*AAPLRQRWVSLRCLQPPPRPPPRPCPLPAPWRVTPSWESSVPTSPWPALG 473
           ++      AP R R         PP PPP     P  +   P  + S P     A G
Sbjct: 405 AANPPS-PAPSRSRAGGPPLGTRPPPPPPEDDAPPPDYYFPPPQDMSPPPPKKKATG 460

>ref|NP_203248.1| unknown [Epiphyas postvittana nucleopolyhedrovirus]
           gi|15213204|gb|AAK85643.1| unknown [Epiphyas postvittana
           nucleopolyhedrovirus]
          Length = 234

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 43/132 (32%), Positives = 50/132 (37%), Gaps = 1/132 (0%)
 Frame = +3

Query: 126 PTPSRTARSSPSAWTPPS-TWTQTPPRCA*P*TRPVCSWRTRCRVPRCCAPSSPAPQSST 302
           PTPS T   +PS    PS T + TPP    P   P  S  T    P    P SP P  + 
Sbjct: 38  PTPSPTPLPTPSPTPSPSPTPSPTPPPSPTPSPTPPPS-PTPSPTPSPTPPPSPTPSPTP 96

Query: 303 SSTACC*AAPLRQRWVSLRCLQPPPRPPPRPCPLPAPWRVTPSWESSVPTSPWPALGN*L 482
           S T                   P P P P P P P+P      W +  PT P P L    
Sbjct: 97  SPTP-----------------SPTPSPSPLPSPTPSPTPSPTLWPTPSPT-PSPTL---- 134

Query: 483 RLLVWPSPCPTP 518
               WP+P P+P
Sbjct: 135 ----WPTPSPSP 142

 Score = 38.9 bits (89), Expect = 0.045
 Identities = 31/95 (32%), Positives = 39/95 (40%), Gaps = 2/95 (2%)
 Frame = +3

Query: 240 RTRCRVPRCCAPS-SPAPQSSTSSTACC*AAPLRQRWVSLRCLQPPPRPPPRPCPLPAPW 416
           + +C   +C  P+ SP P  + S T      P      S     P P PPP P P P P 
Sbjct: 27  QNKCNSEKCLPPTPSPTPLPTPSPTPSPSPTPSPTPPPSPT---PSPTPPPSPTPSPTPS 83

Query: 417 RVTPSWESSVPT-SPWPALGN*LRLLVWPSPCPTP 518
              P   +  PT SP P+       L  P+P PTP
Sbjct: 84  PTPPPSPTPSPTPSPTPSPTPSPSPLPSPTPSPTP 118

 Score = 37.4 bits (85), Expect = 0.13
 Identities = 24/61 (39%), Positives = 29/61 (47%)
 Frame = +3

Query: 351 SLRCLQPPPRPPPRPCPLPAPWRVTPSWESSVPTSPWPALGN*LRLLVWPSPCPTPISST 530
           S +CL P P P P P P P P   +P+   + P SP P+          P P PTP S T
Sbjct: 32  SEKCLPPTPSPTPLPTPSPTP-SPSPTPSPTPPPSPTPS--------PTPPPSPTP-SPT 81

Query: 531 P 533
           P
Sbjct: 82  P 82

 Score = 34.7 bits (78), Expect = 0.84
 Identities = 13/17 (76%), Positives = 15/17 (87%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSP 412
           P+ SPTP+PTP PTPSP
Sbjct: 90  PTPSPTPSPTPSPTPSP 106

 Score = 33.9 bits (76), Expect = 1.4
 Identities = 13/17 (76%), Positives = 14/17 (81%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSP 412
           P  SPTP+PTP PTPSP
Sbjct: 86  PPPSPTPSPTPSPTPSP 102

 Score = 33.9 bits (76), Expect = 1.4
 Identities = 14/22 (63%), Positives = 15/22 (67%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSPVAGDT 427
           PS SP P+PTP PTPSP    T
Sbjct: 104 PSPSPLPSPTPSPTPSPTLWPT 125

 Score = 33.9 bits (76), Expect = 1.4
 Identities = 12/22 (54%), Positives = 17/22 (76%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSPVAGDT 427
           PS +P+PTP+P P+PSP+   T
Sbjct: 92  PSPTPSPTPSPTPSPSPLPSPT 113

 Score = 33.9 bits (76), Expect = 1.4
 Identities = 13/17 (76%), Positives = 14/17 (81%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSP 412
           P+ SPTP PTP PTPSP
Sbjct: 38  PTPSPTPLPTPSPTPSP 54

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSPVAGDT 427
           PS +P P+PTP PTPSP    T
Sbjct: 82  PSPTPPPSPTPSPTPSPTPSPT 103

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSPVAGDT 427
           PS +P+PTP P PTPSP    T
Sbjct: 78  PSPTPSPTPPPSPTPSPTPSPT 99

 Score = 33.5 bits (75), Expect = 1.9
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSPVAGDT 427
           PS +P+PTP P PTPSP    T
Sbjct: 64  PSPTPSPTPPPSPTPSPTPSPT 85

 Score = 33.1 bits (74), Expect = 2.5
 Identities = 12/17 (70%), Positives = 15/17 (87%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSP 412
           PS SPTP+PTP P+P+P
Sbjct: 52  PSPSPTPSPTPPPSPTP 68

 Score = 32.7 bits (73), Expect = 3.2
 Identities = 12/22 (54%), Positives = 15/22 (67%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSPVAGDT 427
           P+ SP+PTP+P P PSP    T
Sbjct: 50  PTPSPSPTPSPTPPPSPTPSPT 71

 Score = 32.7 bits (73), Expect = 3.2
 Identities = 12/22 (54%), Positives = 15/22 (67%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSPVAGDT 427
           PS +P+PTP+P P PSP    T
Sbjct: 74  PSPTPSPTPSPTPPPSPTPSPT 95

 Score = 32.7 bits (73), Expect = 3.2
 Identities = 12/22 (54%), Positives = 15/22 (67%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSPVAGDT 427
           PS +P PTP+P P+PSP    T
Sbjct: 40  PSPTPLPTPSPTPSPSPTPSPT 61

 Score = 32.7 bits (73), Expect = 3.2
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSPVAGDTI 430
           PS +P+P+P P PTPSP    T+
Sbjct: 100 PSPTPSPSPLPSPTPSPTPSPTL 122

 Score = 32.3 bits (72), Expect = 4.2
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSPVAGDTI 430
           P+ SPTP+PT  PTPSP    T+
Sbjct: 112 PTPSPTPSPTLWPTPSPTPSPTL 134

 Score = 32.3 bits (72), Expect = 4.2
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 359 MPSASPTPTPTPVPTPSPVAGDT 427
           +P+ SPTP+P+P P+P+P    T
Sbjct: 45  LPTPSPTPSPSPTPSPTPPPSPT 67

 Score = 32.0 bits (71), Expect = 5.5
 Identities = 12/17 (70%), Positives = 13/17 (75%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSP 412
           P  SPTP+PTP PTP P
Sbjct: 72  PPPSPTPSPTPSPTPPP 88

 Score = 32.0 bits (71), Expect = 5.5
 Identities = 12/22 (54%), Positives = 15/22 (67%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSPVAGDT 427
           PS +P+PTP+P P PSP    T
Sbjct: 96  PSPTPSPTPSPSPLPSPTPSPT 117

 Score = 31.2 bits (69), Expect = 9.3
 Identities = 11/17 (64%), Positives = 14/17 (81%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSP 412
           P  SPTP+PTP P+P+P
Sbjct: 62  PPPSPTPSPTPPPSPTP 78

 Score = 31.2 bits (69), Expect = 9.3
 Identities = 10/17 (58%), Positives = 15/17 (87%)
 Frame = +2

Query: 362 PSASPTPTPTPVPTPSP 412
           PS +P+PTP+P P+P+P
Sbjct: 88  PSPTPSPTPSPTPSPTP 104

>gb|AAL39574.1| LD13887p [Drosophila melanogaster]
          Length = 479

 Score = 49.7 bits (117), Expect = 3e-05
 Identities = 42/142 (29%), Positives = 53/142 (36%), Gaps = 6/142 (4%)
 Frame = +1

Query: 67  QPDHRADHQRPRARGRLVQCQRPHERPDHPH-RHG-PHQVHGRKRHHGARDRERDRCVPG 240
           Q   +   Q+ + + +    Q PH  P HPH +H  PH +     HH           PG
Sbjct: 316 QQHQQQQQQQQQQQQQQHMLQHPHTHP-HPHAQHSHPHTLPHSLPHH---------LQPG 365

Query: 241 APGVGC----QGAAHHPRRPHSRQHHRQRAAEPRLCGSAGSH*DAFSLPHAHPHARAHSQ 408
            P        Q   H+P  PHS  HH+            G H     LPHAH  A AH  
Sbjct: 366 TPTRSSHPQLQHPHHYPPSPHSHPHHQ-----------TGHH----GLPHAHHFAYAHGH 410

Query: 409 PRGG*HHPGSHQCRHLPGRHWA 474
           P    HHP  +   H   +H A
Sbjct: 411 PHPQQHHPHYYPHPHAHVQHMA 432

 Score = 40.4 bits (93), Expect = 0.015
 Identities = 36/137 (26%), Positives = 42/137 (30%), Gaps = 7/137 (5%)
 Frame = +1

Query: 46  PAPDGRSQPDHRADHQRPR-------ARGRLVQCQRPHERPDHPHRHGPHQVHGRKRHHG 204
           P P  +    H   H  P         R    Q Q PH  P  PH H  HQ      HHG
Sbjct: 342 PHPHAQHSHPHTLPHSLPHHLQPGTPTRSSHPQLQHPHHYPPSPHSHPHHQTG----HHG 397

Query: 205 ARDRERDRCVPGAPGVGCQGAAHHPRRPHSRQHHRQRAAEPRLCGSAGSH*DAFSLPHAH 384
                    +P A        A+    PH +QHH                      PH +
Sbjct: 398 ---------LPHA-----HHFAYAHGHPHPQQHH----------------------PHYY 421

Query: 385 PHARAHSQPRGG*HHPG 435
           PH  AH Q      +PG
Sbjct: 422 PHPHAHVQHMAAMGYPG 438



EST assemble image


clone accession position
1 LCL073e05_r AV630119 1 481
2 LCL042b03_r AV628452 40 542




Chlamydomonas reinhardtii
Kazusa DNA Research Institute