Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003210A_C01 KCC003210A_c01
(672 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00032024.1| COG0028: Thiamine pyrophosphate-requiring enz... 37 0.35
ref|ZP_00056871.1| hypothetical protein [Thermobifida fusca] 35 1.0
gb|AAO62420.1| p67-like superoxide-generating NADPH oxidase [Dic... 34 1.7
ref|NP_840620.1| TonB-dependent receptor protein [Nitrosomonas e... 34 2.3
gb|AAG59666.1|AC084319_24 hypothetical protein [Oryza sativa] 34 2.3
>ref|ZP_00032024.1| COG0028: Thiamine pyrophosphate-requiring enzymes [acetolactate
synthase, pyruvate dehydrogenase (cytochrome),
glyoxylate carboligase, phosphonopyruvate decarboxylase]
[Burkholderia fungorum]
Length = 797
Score = 36.6 bits (83), Expect = 0.35
Identities = 41/128 (32%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Frame = +2
Query: 137 REQRRRARPRWRLITSF*RARATRDPASNRPGSRTGACHPASRAAACLPKCCSGAA*ALY 316
R+QR R WR R R PA+ R AC A A P +GAA L
Sbjct: 17 RQQRSRRAASWRA-----RRCIQRGPAALRRHRLHTACDAAVSGMARTP---AGAATGLC 68
Query: 317 LSYSS--ATTRRPQLSSLTST*SRSRRRARSACVGLRVMRCPSTEDIGAGQ*GKERTAFE 490
LS S RRP S + +S+R RSAC G V +D G G G + +
Sbjct: 69 LSQQSLRVAGRRPHRSHSVRS-GKSQRSRRSAC-GRNVPVSARQDDRGGGARGIGQPEPD 126
Query: 491 LGCVGTSA 514
GC +++
Sbjct: 127 AGCAPSTS 134
>ref|ZP_00056871.1| hypothetical protein [Thermobifida fusca]
Length = 293
Score = 35.0 bits (79), Expect = 1.0
Identities = 30/108 (27%), Positives = 45/108 (40%), Gaps = 13/108 (12%)
Frame = -1
Query: 522 HSAADVPTQPSSKAVLSLPHCPAPMSSVLGHLITLNPTHALLARLLLLDHVDVRLLSCGL 343
H D P + +L P P+++V+ L+ L LLAR+ + V L+ G+
Sbjct: 28 HPPQDTPPAEHRRTLLPQPIADHPVATVVIILLVLLVGMRLLARVFVFVAAAVLLIGAGI 87
Query: 342 LVVA-------------EEYDRYSAHAAPEQHLGKHAAALDAGWQAPV 238
L++A + DRY H L + AAAL A Q V
Sbjct: 88 LLIALLAPRRDPQRAARQLRDRYRDHYVTADDLDEEAAALLARAQRAV 135
>gb|AAO62420.1| p67-like superoxide-generating NADPH oxidase [Dictyostelium
discoideum] gi|29367189|gb|AAO72634.1| p67-like
superoxide-generating NADPH oxidase [Dictyostelium
discoideum]
Length = 604
Score = 34.3 bits (77), Expect = 1.7
Identities = 26/75 (34%), Positives = 42/75 (55%), Gaps = 3/75 (4%)
Frame = -3
Query: 589 TSSPDPLLLLIAV*IPPLLAAATQRGRRANTAQLESSS---LLASLPSTYVLSAWASHHS 419
++ P PL LL PP ++ A Q+ R A T+ ++SSS ++S P +Y+L +S S
Sbjct: 170 STRPIPLSLLFK---PPKVSDAPQKQRSATTSSIQSSSPSTPMSSSPPSYILKGPSSPPS 226
Query: 418 QSNACAPRAPSASGS 374
S+ + +PS S S
Sbjct: 227 SSSP-SSSSPSLSSS 240
>ref|NP_840620.1| TonB-dependent receptor protein [Nitrosomonas europaea ATCC 19718]
gi|30138436|emb|CAD84446.1| TonB-dependent receptor
protein [Nitrosomonas europaea ATCC 19718]
Length = 848
Score = 33.9 bits (76), Expect = 2.3
Identities = 25/85 (29%), Positives = 34/85 (39%)
Frame = -1
Query: 516 AADVPTQPSSKAVLSLPHCPAPMSSVLGHLITLNPTHALLARLLLLDHVDVRLLSCGLLV 337
A D+ QP +A+ L + V L+ AL R L + L GL V
Sbjct: 56 AIDIAAQPLEQAITQLATQAGLLIGVDVSLVAGKQAPALNGRFTPLQAIGQLLKGSGLTV 115
Query: 336 VAEEYDRYSAHAAPEQHLGKHAAAL 262
V RY+ AAP H +A A+
Sbjct: 116 VENAPGRYTLEAAPAGHTNSNAEAV 140
>gb|AAG59666.1|AC084319_24 hypothetical protein [Oryza sativa]
Length = 185
Score = 33.9 bits (76), Expect = 2.3
Identities = 26/75 (34%), Positives = 35/75 (46%)
Frame = -3
Query: 310 RSRRTRTTLGQTRGCP*RRVAGASPASRSV*SWVPCCPRPSERRNQTPSRARPSPLLPSR 131
RSRR+ RG RR A P +R + P CPRP+ R P + P PLLP+
Sbjct: 92 RSRRSSPPRAD-RGATGRRAA--PPCARDAAAAAPPCPRPTPPR-AVPWQLAPPPLLPAA 147
Query: 130 YSLNQRVRYSGFYTG 86
+GF++G
Sbjct: 148 RWPRIAAATAGFWSG 162
