Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003206A_C01 KCC003206A_c01
(538 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-... 63 2e-09
ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix prote... 61 8e-09
ref|NP_492875.2| pre-mRNA splicing SR protein related (68.2 kD) ... 60 2e-08
gb|AAK53449.1| unknown [Streptomyces aureofaciens] 58 9e-08
gb|AAC82365.1| unknown [Myxococcus xanthus] 57 2e-07
>ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-of-prolines-101;
serine/arginine repetitive matrix protein 1 [Mus
musculus] gi|3153821|gb|AAC17422.1|
plenty-of-prolines-101; POP101; SH3-philo-protein [Mus
musculus]
Length = 897
Score = 63.2 bits (152), Expect = 2e-09
Identities = 59/186 (31%), Positives = 77/186 (40%), Gaps = 24/186 (12%)
Frame = -1
Query: 517 RSSCPTWPRTWRRPPAP*TPACPGPPLCRRRHRRCPPAAVRARTCAQ*APAPDPSGS*CP 338
RS P P RR P+P P P PP RRR PP R RT + PS
Sbjct: 560 RSPSPP-PARRRRSPSPAPPPPPPPPPPRRRRSPTPPP--RRRTPSPPPRRRSPSPRRYS 616
Query: 337 SAAARRAPPGPARRQRPSRPRTPPRNWTWCRAAPGRRLTGTLRPWRPPRPCRPCRQARQS 158
RR P P ++R + P PP+ P RR++ + PP+ P R+S
Sbjct: 617 PPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHS----PPPKQRSPTVTKRRS 672
Query: 157 PS--------RSPG*A-----SPRTRRRR----RPTAPCRCGPP-------STPRGRRGP 50
PS SPG + SP+ +R RP AP PP ++P+GR+ P
Sbjct: 673 PSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQSP 732
Query: 49 GPSAAP 32
PS P
Sbjct: 733 SPSTRP 738
Score = 49.7 bits (117), Expect = 2e-05
Identities = 34/96 (35%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = -1
Query: 328 ARRAPPGPARRQRPSRPRTPP-RNWTWCRAAPGRRLTGTLRPWRPPRPCRPCRQARQSPS 152
+R A P P +RQ+ + PR + W +T + R R P P R+ SP+
Sbjct: 524 SRSASPSPRKRQKETSPRMQMGKRWQ-------SPVTKSSRRRRSPSPPPARRRRSPSPA 576
Query: 151 RSPG*ASPRTRRRRRPTAPCRCGPPSTPRGRRGPGP 44
P P RRRR PT P R PS P RR P P
Sbjct: 577 PPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSPSP 612
Score = 45.4 bits (106), Expect = 5e-04
Identities = 36/102 (35%), Positives = 44/102 (42%), Gaps = 4/102 (3%)
Frame = -1
Query: 337 SAAARRAP-PGPARRQRPSRPRTPPRNWTWCRAAPGRRLTGTLRPWRPPRPCRPCRQARQ 161
S+ RR+P P PARR+R P PP P RR P R P P R+
Sbjct: 555 SSRRRRSPSPPPARRRRSPSPAPPPPP----PPPPPRRRRSPTPPPRRRTPSPPPRRRSP 610
Query: 160 SPSRSPG*ASPRTRRRRRPTAPCR---CGPPSTPRGRRGPGP 44
SP R SP +RR P+ P + PP P+ R P P
Sbjct: 611 SPRR----YSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSP 648
Score = 36.6 bits (83), Expect = 0.21
Identities = 35/115 (30%), Positives = 45/115 (38%), Gaps = 6/115 (5%)
Frame = -1
Query: 373 APAPDPSGS*CPSAAARRAPPGPARRQRPSRPRTPPRNWTWCRAAPGRRLTGTLRPWRPP 194
AP P+P P P + + + +T PR+ + ++ R R P
Sbjct: 247 APKPEP--------VPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRS-------RSP 291
Query: 193 RPCRPCRQARQ-----SPSRSPG*ASPRTRRR-RRPTAPCRCGPPSTPRGRRGPG 47
RP R+ R SP R P SPR R RR T P R PP R R PG
Sbjct: 292 SHTRPRRRHRSRSRSYSPRRRP---SPRRRPSPRRRTPPRRMPPPPRHRRSRSPG 343
Score = 33.9 bits (76), Expect = 1.4
Identities = 46/172 (26%), Positives = 59/172 (33%), Gaps = 18/172 (10%)
Frame = -1
Query: 517 RSSCPTWPRTWRRPPAP*--TPACPGPPLCRRRHRRCPPAAVRARTCA------------ 380
RS P + RR P+P TP PP R R R P R + +
Sbjct: 305 RSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSR 364
Query: 379 -Q*APAPDPSGS*CPSAAARRAPPG---PARRQRPSRPRTPPRNWTWCRAAPGRRLTGTL 212
+ P P + P RR P P RR RPS P TPP P R
Sbjct: 365 SRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPATPP---------PKTR----- 410
Query: 211 RPWRPPRPCRPCRQARQSPSRSPG*ASPRTRRRRRPTAPCRCGPPSTPRGRR 56
P P + R + S SPG S + + + R P P+ R+
Sbjct: 411 ---HSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEK--RESPSPAPKPRK 457
>ref|XP_233556.2| similar to Ser/Arg-related nuclear matrix protein;
plenty-of-prolines-101; serine/arginine repetitive matrix
protein 1 [Rattus norvegicus]
Length = 958
Score = 61.2 bits (147), Expect = 8e-09
Identities = 59/186 (31%), Positives = 77/186 (40%), Gaps = 24/186 (12%)
Frame = -1
Query: 517 RSSCPTWPRTWRRPPAP*TPACPGPPLCRRRHRRCPPAAVRARTCAQ*APAPDPSGS*CP 338
RS P P RR P+P P P PP RRR PP R RT + PS
Sbjct: 596 RSPSPP-PARRRRSPSPAPPPPPPPPPRRRRSPTPPP---RRRTPSPPPRRRSPSPRRYS 651
Query: 337 SAAARRAPPGPARRQRPSRPRTPPRNWTWCRAAPGRRLTGTLRPWRPPRPCRPCRQARQS 158
RR P P ++R + P PP+ P RR++ + PP+ P R+S
Sbjct: 652 PPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHS----PPPKQRSPPVTKRRS 707
Query: 157 PS--------RSPG*A-----SPRTRRRR----RPTAPCRCGPP-------STPRGRRGP 50
PS SPG + SP+ +R RP AP PP ++P+GR+ P
Sbjct: 708 PSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGASASPQGRQSP 767
Query: 49 GPSAAP 32
PS P
Sbjct: 768 SPSTRP 773
Score = 45.4 bits (106), Expect = 5e-04
Identities = 35/90 (38%), Positives = 40/90 (43%), Gaps = 1/90 (1%)
Frame = -1
Query: 310 GPARRQRPSRPRTPPRNWTWCRAAPGRRLTGTLRPWRPPRPCRPCRQARQSPSRSPG*AS 131
G RR PSR +P +P RR R P P P + R+SPS +P
Sbjct: 567 GRRRRHSPSRSASPSPRKRQKETSPRRRR-------RSPSP--PPARRRRSPSPAPPPPP 617
Query: 130 PRT-RRRRRPTAPCRCGPPSTPRGRRGPGP 44
P RRRR PT P R PS P RR P P
Sbjct: 618 PPPPRRRRSPTPPPRRRTPSPPPRRRSPSP 647
Score = 45.1 bits (105), Expect = 6e-04
Identities = 41/133 (30%), Positives = 51/133 (37%), Gaps = 4/133 (3%)
Frame = -1
Query: 430 RRHRRCPPAAVRARTCAQ*APAPDPSGS*CPSAAARRAP-PGPARRQRPSRPRTPPRNWT 254
RR R P + +P+P RR+P P PARR+R P PP
Sbjct: 568 RRRRHSPSRSA--------SPSPRKRQKETSPRRRRRSPSPPPARRRRSPSPAPPPP--- 616
Query: 253 WCRAAPGRRLTGTLRPWRPPRPCRPCRQARQSPSRSPG*ASPRTRRRRRPTAPCR---CG 83
P RR P R P P R+ SP R SP +RR P+ P +
Sbjct: 617 --PPPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRR----YSPPIQRRYSPSPPPKRRTAS 670
Query: 82 PPSTPRGRRGPGP 44
PP P+ R P P
Sbjct: 671 PPPPPKRRASPSP 683
Score = 37.7 bits (86), Expect = 0.096
Identities = 24/49 (48%), Positives = 29/49 (58%), Gaps = 1/49 (2%)
Frame = -1
Query: 175 RQARQSPSRSPG*ASPRTRRRRRPTAP-CRCGPPSTPRGRRGPGPSAAP 32
R+ R SPSRS ASP R+R++ T+P R PS P RR PS AP
Sbjct: 568 RRRRHSPSRS---ASPSPRKRQKETSPRRRRRSPSPPPARRRRSPSPAP 613
Score = 36.6 bits (83), Expect = 0.21
Identities = 35/115 (30%), Positives = 45/115 (38%), Gaps = 6/115 (5%)
Frame = -1
Query: 373 APAPDPSGS*CPSAAARRAPPGPARRQRPSRPRTPPRNWTWCRAAPGRRLTGTLRPWRPP 194
AP P+P P P + + + +T PR+ + ++ R R P
Sbjct: 306 APKPEP--------VPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRS-------RSP 350
Query: 193 RPCRPCRQARQ-----SPSRSPG*ASPRTRRR-RRPTAPCRCGPPSTPRGRRGPG 47
RP R+ R SP R P SPR R RR T P R PP R R PG
Sbjct: 351 SHTRPRRRHRSRSRSYSPRRRP---SPRRRPSPRRRTPPRRMPPPPRHRRSRSPG 402
Score = 33.9 bits (76), Expect = 1.4
Identities = 46/172 (26%), Positives = 59/172 (33%), Gaps = 18/172 (10%)
Frame = -1
Query: 517 RSSCPTWPRTWRRPPAP*--TPACPGPPLCRRRHRRCPPAAVRARTCA------------ 380
RS P + RR P+P TP PP R R R P R + +
Sbjct: 364 RSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSR 423
Query: 379 -Q*APAPDPSGS*CPSAAARRAPPG---PARRQRPSRPRTPPRNWTWCRAAPGRRLTGTL 212
+ P P + P RR P P RR RPS P TPP P R
Sbjct: 424 SRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPATPP---------PKTR----- 469
Query: 211 RPWRPPRPCRPCRQARQSPSRSPG*ASPRTRRRRRPTAPCRCGPPSTPRGRR 56
P P + R + S SPG S + + + R P P+ R+
Sbjct: 470 ---HSPTPQQSNRARKSRVSVSPGRTSGKVTKHKGTEK--RESPSPAPKPRK 516
>ref|NP_492875.2| pre-mRNA splicing SR protein related (68.2 kD) (rsr-1)
[Caenorhabditis elegans] gi|19571645|emb|CAB04214.3| C.
elegans RSR-1 protein (corresponding sequence F28D9.1)
[Caenorhabditis elegans]
Length = 601
Score = 60.1 bits (144), Expect = 2e-08
Identities = 58/172 (33%), Positives = 72/172 (41%), Gaps = 20/172 (11%)
Frame = -1
Query: 496 PRTWRRPPAP*TPACPGPPLCRRRHRRCPPAAVRART-CAQ*APAPDP----SGS*CPSA 332
P RR +P P P + R + P A R R+ A +P P P S S P A
Sbjct: 314 PPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPA 373
Query: 331 AARRAP------PGPARRQRPSRPRTP-PRNWTWCRAAPGRRLTGTLRPWRPPRPCR--- 182
RR+P P P RR+ PS+ R+P P+ P RR PP P R
Sbjct: 374 RRRRSPSASKSPPAPRRRRSPSKSRSPAPKR----EIPPARRRRSPSASKSPPAPKRAKS 429
Query: 181 -----PCRQARQSPSRSPG*ASPRTRRRRRPTAPCRCGPPSTPRGRRGPGPS 41
P + R+SPS+S SP RRRR P+ P PR RR P S
Sbjct: 430 RSKSPPAPRRRRSPSQS---KSPAPRRRRSPSK-----SPQAPRRRRSPSGS 473
Score = 55.5 bits (132), Expect = 4e-07
Identities = 51/149 (34%), Positives = 66/149 (44%), Gaps = 19/149 (12%)
Frame = -1
Query: 421 RRCPPAAVRARTCAQ*APAPDPSGS*CPSAAARRA--PPGPARRQR-PSRPRTPP----R 263
RR P+A ++ A+ +P S S P A R+ PP PARR+R PS ++PP R
Sbjct: 304 RRRSPSASKSPPPARRRRSPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKR 363
Query: 262 NWTWCRAAPGRRLTGTLRPWRPPRPCRPCRQARQSPSRSPG*AS--PRTRRRRRPT---- 101
+ ++ P RR PP P R + S SRSP P RRRR P+
Sbjct: 364 AKSRSKSPPARRRRSPSASKSPPAPRR---RRSPSKSRSPAPKREIPPARRRRSPSASKS 420
Query: 100 ------APCRCGPPSTPRGRRGPGPSAAP 32
A R P PR RR P S +P
Sbjct: 421 PPAPKRAKSRSKSPPAPRRRRSPSQSKSP 449
Score = 47.8 bits (112), Expect = 9e-05
Identities = 46/147 (31%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Frame = -1
Query: 433 RRRHRRCPPAAVRARTCAQ*APAPDPSGS*CPSAAARRAPPGPARRQRPSRPRTPPRNWT 254
++RH + A A + P PSA+ ++PP RR+ PS+ ++P
Sbjct: 277 KKRHEEAELRQKAIASVAARAKSGSPRRRRSPSAS--KSPPPARRRRSPSQSKSP----- 329
Query: 253 WCRAAPGRRLTGTLRPWRPPRPCRPCRQ--ARQSPSRSPG*A-----SPRTRRRRRPTAP 95
AP R + R PP P R R A +SP +P A SP RRRR P+A
Sbjct: 330 ----APKRAKS---RSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPARRRRSPSAS 382
Query: 94 CRCGPPSTPRGRRGPGPSAAPCCAAEV 14
P PR RR P S +P E+
Sbjct: 383 ---KSPPAPRRRRSPSKSRSPAPKREI 406
Score = 45.8 bits (107), Expect = 4e-04
Identities = 45/139 (32%), Positives = 57/139 (40%), Gaps = 1/139 (0%)
Frame = -1
Query: 517 RSSCPTWPRTWRRPPAP*TPACPGPPLCRRRHRRCPPAAVRARTCAQ*APAPDPSGS*CP 338
RS P PR R P +PA P RR + P A R R+ PSGS
Sbjct: 430 RSKSPPAPRRRRSPSQSKSPA----PRRRRSPSKSPQAPRRRRS---------PSGSKSR 476
Query: 337 SAAARRAPPG-PARRQRPSRPRTPPRNWTWCRAAPGRRLTGTLRPWRPPRPCRPCRQARQ 161
S RR+P P RRQ P R R+P R R + + R PP P P R +
Sbjct: 477 SPRRRRSPAAAPRRRQSPQRRRSPRRR---------RSPSSSSRSRSPPPP--PRRPRQD 525
Query: 160 SPSRSPG*ASPRTRRRRRP 104
S ++P ++RRP
Sbjct: 526 SEQQAPVAVKSPEMKKRRP 544
Score = 37.0 bits (84), Expect = 0.16
Identities = 52/166 (31%), Positives = 71/166 (42%), Gaps = 8/166 (4%)
Frame = +2
Query: 47 PWAPAAAWCGRRAAAAWRCGAPTTASS--WARLARGP---RGRLARLAARPARPRRAPRA 211
P AP A ++ A R +P+ + S R R P R + PAR RR+P A
Sbjct: 358 PPAPKRAKSRSKSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSA 417
Query: 212 QCTRQA---AAWRGPAPCPITRRRTRARRALAACWAGRGATRSSRWTSTPGRVWSRCSLS 382
+ A A R +P RRR+ ++ A R ++S + P R R S S
Sbjct: 418 SKSPPAPKRAKSRSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQ---APRR---RRSPS 471
Query: 383 ASSSAHRRRRTTTMATAAQRRTWARRCSRGWRAPPSSRPSGARRSP 520
S S RRR + A +R++ RR S R PSS S RSP
Sbjct: 472 GSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSS--SSRSRSP 515
>gb|AAK53449.1| unknown [Streptomyces aureofaciens]
Length = 579
Score = 57.8 bits (138), Expect = 9e-08
Identities = 55/150 (36%), Positives = 60/150 (39%), Gaps = 6/150 (4%)
Frame = -1
Query: 496 PRTWRRPPAP*TPACPGPPLCRRRHRRCP------PAAVRARTCAQ*APAPDPSGS*CPS 335
P RRPP P TP P R RR P P + R RT APA P
Sbjct: 455 PTPARRPPPPPTPPVP-------RARRGPAAGNGRPPSTRDRTAGTRAPASPPG------ 501
Query: 334 AAARRAPPGPARRQRPSRPRTPPRNWTWCRAAPGRRLTGTLRPWRPPRPCRPCRQARQSP 155
APP P RR+RP PR PP + R R T RP PPRP R P
Sbjct: 502 -----APP-PVRRRRPPPPRAPPPHHPSARNPSAR---ATPRPRPPPRPSAAAR-PEPPP 551
Query: 154 SRSPG*ASPRTRRRRRPTAPCRCGPPSTPR 65
+PG + TAP GPPS PR
Sbjct: 552 RAAPGPSG---------TAP---GPPSGPR 569
Score = 54.7 bits (130), Expect = 8e-07
Identities = 62/177 (35%), Positives = 71/177 (40%), Gaps = 27/177 (15%)
Frame = -1
Query: 481 RPPAP*TPACPGPPLCRRRHRRCPPAAVRARTCAQ*APAPDPSGS*CPS---AAARRAPP 311
RPPA A PGP R P ART ++ PA P+ PS AA RA
Sbjct: 404 RPPAR---APPGPRPAPTRAASTP-----ARTGSR--PASPPTRPTAPSPAPAAPPRAAA 453
Query: 310 GPARRQRPSRPRTPP--RNWTWCRAAPGR------RLTGTLRPWRPPRPCRPCRQARQSP 155
P +RP P TPP R A GR R GT P PP P R+ R P
Sbjct: 454 APTPARRPPPPPTPPVPRARRGPAAGNGRPPSTRDRTAGTRAPASPPGAPPPVRRRRPPP 513
Query: 154 SRSP-----------G*ASPRTRRRRRPTAPCRCGPPSTPRGRRG-----PGPSAAP 32
R+P A+PR R RP+A R PP PR G PGP + P
Sbjct: 514 PRAPPPHHPSARNPSARATPRPRPPPRPSAAARPEPP--PRAAPGPSGTAPGPPSGP 568
Score = 54.7 bits (130), Expect = 8e-07
Identities = 48/134 (35%), Positives = 57/134 (41%), Gaps = 1/134 (0%)
Frame = -3
Query: 443 ASVPPSPSSLSSGGGARSNLRSMSTGSRPVRELMSICCCASRPSRPSTP-PAPVSPAYAA 267
A PP P + R+ TGSRP AS P+RP+ P PAP +P AA
Sbjct: 407 ARAPPGPRPAPT----RAASTPARTGSRP----------ASPPTRPTAPSPAPAAPPRAA 452
Query: 266 A*LDMVPGRARPPPDGYTAPVAPAEAVPAVPPGAPVSLSVPGLSEPKNSPS*APHSAMPL 87
A P AR PP T PV A PA G P S + + + + AP S
Sbjct: 453 A----APTPARRPPPPPTPPVPRARRGPAAGNGRPPS------TRDRTAGTRAPASPPGA 502
Query: 86 RPAVHTTRPPGPRA 45
P V RPP PRA
Sbjct: 503 PPPVRRRRPPPPRA 516
Score = 48.1 bits (113), Expect = 7e-05
Identities = 54/154 (35%), Positives = 61/154 (39%), Gaps = 5/154 (3%)
Frame = -1
Query: 478 PPAP*TPACPGPPLCRRRHRRCPPAAVRARTCAQ*APAPDPSGS*CPSAAARRAPPGPAR 299
P P A G P + R A AR PAP + S +R A P P R
Sbjct: 379 PEGPANGAGAGRPTATSGYARPQHARPPARAPPGPRPAPTRAASTPARTGSRPASP-PTR 437
Query: 298 RQRPS-RPRTPPRNWTWCRAAPGRRLTGTLRPWRPPRPCRPCRQARQSPSRSPG*ASPRT 122
PS P PPR AAP T RP PP P P +AR+ P+ G P T
Sbjct: 438 PTAPSPAPAAPPR----AAAAP----TPARRP--PPPPTPPVPRARRGPAAGNG-RPPST 486
Query: 121 RRR----RRPTAPCRCGPPSTPRGRRGPGPSAAP 32
R R R P +P G P R RR P P A P
Sbjct: 487 RDRTAGTRAPASP--PGAPPPVRRRRPPPPRAPP 518
Score = 36.6 bits (83), Expect = 0.21
Identities = 55/185 (29%), Positives = 60/185 (31%), Gaps = 20/185 (10%)
Frame = +2
Query: 20 GRTARC----G*WPWAPAAAWCGRRAAAAWRCGAPTTASSWARLARGPRGRLARLAARPA 187
G RC G P PA R A P A AR GPR R A+ PA
Sbjct: 366 GSRCRCCRGAGVEPEGPANGAGAGRPTATSGYARPQHARPPARAPPGPRPAPTRAASTPA 425
Query: 188 RPRRAPRAQCTRQAAAWRGPA---------------PCPITRRRTRARRALAACWAGRGA 322
R P + TR A PA P P T RARR A AG G
Sbjct: 426 RTGSRPASPPTRPTAPSPAPAAPPRAAAAPTPARRPPPPPTPPVPRARRGPA---AGNGR 482
Query: 323 TRSSRWTSTPGRVWSRCSLSASSSAHRRRRTTTMATAAQRRTWARRCSRGWRAP-PSSRP 499
S+R T G A RRR A + +R P P RP
Sbjct: 483 PPSTR-DRTAGTRAPASPPGAPPPVRRRRPPPPRAPPPHHPSARNPSARATPRPRPPPRP 541
Query: 500 SGARR 514
S A R
Sbjct: 542 SAAAR 546
>gb|AAC82365.1| unknown [Myxococcus xanthus]
Length = 542
Score = 57.0 bits (136), Expect = 2e-07
Identities = 54/156 (34%), Positives = 63/156 (39%), Gaps = 1/156 (0%)
Frame = -1
Query: 496 PRTWRRPPAP*TPACPGPPLCRRRHRRCPPAAVRARTCAQ*APAPDPSGS*CPSAAARRA 317
P+ P AP P PP RRRHR + R TCA+ + P+ PS ARR
Sbjct: 47 PQAVPGPCAPRAPPRSPPP--RRRHRGSRHRSFRP-TCARRSGRRCPA----PSRHARRN 99
Query: 316 PPGPARRQRPSRPRTPPRNWTWCRAAPGRRLTGTLRPWRPPRPCRPCRQA-RQSPSRSPG 140
P GP+RR P R TP R T C A P R RP P A R P+ P
Sbjct: 100 PAGPSRRCGPPRKSTPTRCCTPCPAPPRCR----------ARPSAPAPSAGRTCPTAGPS 149
Query: 139 *ASPRTRRRRRPTAPCRCGPPSTPRGRRGPGPSAAP 32
+ PT C P TP G PS +P
Sbjct: 150 SCASGC----CPTGRCGSAPGPTPHGAEPSPPSQSP 181
Score = 50.8 bits (120), Expect = 1e-05
Identities = 57/192 (29%), Positives = 62/192 (31%), Gaps = 33/192 (17%)
Frame = -1
Query: 505 PTWPRTWRRPPAP*TPA-----CPGPPLCRRRHRRCPPAAVRARTCAQ*APAPDPSGS*C 341
P P PP TP CP PP CR R P+A RTC P+ SG C
Sbjct: 100 PAGPSRRCGPPRKSTPTRCCTPCPAPPRCRARPSAPAPSA--GRTCPTAGPSSCASGC-C 156
Query: 340 PSAAARRAP---------------PGPARRQRPSRPRTPPRNWTWCRAAPGRRLTGTLRP 206
P+ AP P PA R RT PR +A G L P
Sbjct: 157 PTGRCGSAPGPTPHGAEPSPPSQSPSPAPASSGGRRRTHPRPAR--ASAAGATAPACLPP 214
Query: 205 ----WRPPRPCRPCRQARQSPSRSPG*ASPRTRRRRR---------PTAPCRCGPPSTPR 65
RP C S S P SP T R P+ CR PP T
Sbjct: 215 PRCCGRPGTGCARTAPPSTSASHPPPPRSPGTPPRASGSPAAAPAPPSPACRPPPPGTTP 274
Query: 64 GRRGPGPSAAPC 29
R A PC
Sbjct: 275 APRNAALPALPC 286
Score = 40.0 bits (92), Expect = 0.019
Identities = 38/128 (29%), Positives = 52/128 (39%), Gaps = 20/128 (15%)
Frame = -3
Query: 485 AAPASPLNTCVPRSASVPPSPSSLSSGGGARSN---LRSMSTGSRPVRELMSICCC---- 327
+AP + P S PSP+ SSGG R++ R+ + G+ L CC
Sbjct: 163 SAPGPTPHGAEPSPPSQSPSPAPASSGGRRRTHPRPARASAAGATAPACLPPPRCCGRPG 222
Query: 326 ------------ASRPSRPSTPPAPVSPAYAAA*LDMVPGRA-RPPPDGYTAPVAPAEAV 186
AS P P +P P + + A P A RPPP G T P A+
Sbjct: 223 TGCARTAPPSTSASHPPPPRSPGTPPRASGSPAAAPAPPSPACRPPPPG-TTPAPRNAAL 281
Query: 185 PAVPPGAP 162
PA+P +P
Sbjct: 282 PALPCISP 289
Score = 38.1 bits (87), Expect = 0.074
Identities = 38/122 (31%), Positives = 47/122 (38%), Gaps = 16/122 (13%)
Frame = -1
Query: 340 PSAAARRAPPGPARRQRPSRPRTPPRNWTWCRAAPGRRLTGTLRPWRPPRPCRPCRQ--- 170
P + R PPG R P+ + P P + + G P PPR P R+
Sbjct: 23 PCLLSERTPPGA--RPPPTETASYP---------PPQAVPGPCAPRAPPRSPPPRRRHRG 71
Query: 169 ----------ARQSPSRSPG*ASPRTRRRRRPTAPC-RCGPP--STPRGRRGPGPSAAPC 29
AR+S R P +P RR P P RCGPP STP P P+ C
Sbjct: 72 SRHRSFRPTCARRSGRRCP---APSRHARRNPAGPSRRCGPPRKSTPTRCCTPCPAPPRC 128
Query: 28 CA 23
A
Sbjct: 129 RA 130
