KCC003179A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003179A_C01 KCC003179A_c01
tctacacgaaattctggtaacgaaattttgactgaggaattaacgtctcacgaccacggt
ccaagcagcacctccgaacgCTGCTGCCAGCGAAGTCGCCGCCATTGCGTCTCTTTCTTA
ACACATACACATACTCTCTAGTCAGCCCTGCTAGACCAGGGCGTTACCCAGCTCCTCCGC
CAGGTCTCCGAAGCACATGCGCTGAGCGCAACGCCCTCGGGCTTCAAAGCCCCTCGGGCG
CTATCCATAGTCGCCTATGCTTGCTGTGGAAAACTAAGGAGCGAGCAGGATGAACAGATA
CAAGGTGGTAAAGCAGCTGGGCGATGGCACGTACGGCACGGTGTGGAAGGCCATCAACCG
GCAAACCAATGAAGTGGTGGCTATCAAGAAGATGAAGCGCAAGTTTTACTCATGGGAGGA
GTGCATGAACCTGCGCGAGGTCAAGTCGCTGCGCAAGCTGAACCACC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003179A_C01 KCC003179A_c01
         (467 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_849407.1| protein kinase, putative [Arabidopsis thaliana]      105  3e-22
ref|NP_567574.1| protein kinase, putative [Arabidopsis thaliana]...   105  3e-22
pir||T04432 protein kinase homolog T18B16.80 - Arabidopsis thali...   103  1e-21
dbj|BAC22209.1| serine/threonine-protein kinase Mak (male germ c...   100  1e-20
gb|AAK96701.1| serine/threonine-protein kinase Mak (male germ ce...    99  2e-20

>ref|NP_849407.1| protein kinase, putative [Arabidopsis thaliana]
          Length = 464

 Score =  105 bits (261), Expect = 3e-22
 Identities = 43/59 (72%), Positives = 58/59 (97%)
 Frame = +2

Query: 290 MNRYKVVKQLGDGTYGTVWKAINRQTNEVVAIKKMKRKFYSWEECMNLREVKSLRKLNH 466
           M+RYK++K++GDGT+G+VW+AIN+QT EVVAIKKMK+K+YSW+EC+NLREVKSLR++NH
Sbjct: 1   MDRYKLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWDECINLREVKSLRRMNH 59

>ref|NP_567574.1| protein kinase, putative [Arabidopsis thaliana]
           gi|13430556|gb|AAK25900.1|AF360190_1 putative kinase
           [Arabidopsis thaliana] gi|14532760|gb|AAK64081.1|
           putative kinase [Arabidopsis thaliana]
          Length = 461

 Score =  105 bits (261), Expect = 3e-22
 Identities = 43/59 (72%), Positives = 58/59 (97%)
 Frame = +2

Query: 290 MNRYKVVKQLGDGTYGTVWKAINRQTNEVVAIKKMKRKFYSWEECMNLREVKSLRKLNH 466
           M+RYK++K++GDGT+G+VW+AIN+QT EVVAIKKMK+K+YSW+EC+NLREVKSLR++NH
Sbjct: 1   MDRYKLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWDECINLREVKSLRRMNH 59

>pir||T04432 protein kinase homolog T18B16.80 - Arabidopsis thaliana  (fragment)
           gi|25287609|pir||H85215 kinase-like protein [imported] -
           Arabidopsis thaliana gi|4455158|emb|CAA16700.1|
           kinase-like protein [Arabidopsis thaliana]
           gi|7268706|emb|CAB78913.1| kinase-like protein
           [Arabidopsis thaliana]
          Length = 290

 Score =  103 bits (257), Expect = 1e-21
 Identities = 42/59 (71%), Positives = 58/59 (98%)
 Frame = +2

Query: 290 MNRYKVVKQLGDGTYGTVWKAINRQTNEVVAIKKMKRKFYSWEECMNLREVKSLRKLNH 466
           ++RYK++K++GDGT+G+VW+AIN+QT EVVAIKKMK+K+YSW+EC+NLREVKSLR++NH
Sbjct: 1   ISRYKLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWDECINLREVKSLRRMNH 59

>dbj|BAC22209.1| serine/threonine-protein kinase Mak (male germ cell-associated
           kinase)-like [Oryza sativa (japonica cultivar-group)]
          Length = 454

 Score =  100 bits (248), Expect = 1e-20
 Identities = 40/56 (71%), Positives = 55/56 (97%)
 Frame = +2

Query: 299 YKVVKQLGDGTYGTVWKAINRQTNEVVAIKKMKRKFYSWEECMNLREVKSLRKLNH 466
           YK++K++GDGT+G+VW+AIN+++ EVVAIKKMK+K+YSWEEC+NLREVKSLR++NH
Sbjct: 3   YKIIKEVGDGTFGSVWRAINKESGEVVAIKKMKKKYYSWEECINLREVKSLRRMNH 58

>gb|AAK96701.1| serine/threonine-protein kinase Mak (male germ cell-associated
           kinase)-like protein [Arabidopsis thaliana]
          Length = 499

 Score = 99.4 bits (246), Expect = 2e-20
 Identities = 40/59 (67%), Positives = 55/59 (92%)
 Frame = +2

Query: 290 MNRYKVVKQLGDGTYGTVWKAINRQTNEVVAIKKMKRKFYSWEECMNLREVKSLRKLNH 466
           M RY ++K++GDGT+G VW+A+N+QTNEVVAIK+MK+K++SWEEC+NLREVKSL ++NH
Sbjct: 1   MERYTLLKEVGDGTFGNVWRAVNKQTNEVVAIKRMKKKYFSWEECVNLREVKSLSRMNH 59



EST assemble image


clone accession position
1 LCL078c07_r AV630398 1 467
2 LCL032g02_r AV627836 138 427




Chlamydomonas reinhardtii
Kazusa DNA Research Institute