Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003118A_C01 KCC003118A_c01
(489 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN85523.1|AF484556_45 polyketide synthase [Streptomyces atro... 39 0.026
pdb|1QOK|A Chain A, Mfe-23 An Anti-Carcinoembryonic Antigen Sing... 39 0.044
ref|ZP_00131799.1| COG5295: Autotransporter adhesin [Haemophilus... 38 0.058
ref|NP_823870.1| putative sensor-like histidine kinase [Streptom... 35 0.49
ref|ZP_00054185.1| COG0508: Pyruvate/2-oxoglutarate dehydrogenas... 35 0.64
>gb|AAN85523.1|AF484556_45 polyketide synthase [Streptomyces atroolivaceus]
Length = 7349
Score = 39.3 bits (90), Expect = 0.026
Identities = 25/40 (62%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = -2
Query: 488 RRGNKTVRIGDEPRPAGTLSAG--TRSPVPAAPAPAPAPA 375
RRG K +R+ PR AG SA TR PVPA PAPAPAPA
Sbjct: 5994 RRGPK-IRLA-APRSAGGASATAPTREPVPAPPAPAPAPA 6031
>pdb|1QOK|A Chain A, Mfe-23 An Anti-Carcinoembryonic Antigen Single-Chain Fv
Antibody
Length = 282
Score = 38.5 bits (88), Expect = 0.044
Identities = 23/61 (37%), Positives = 28/61 (45%)
Frame = +1
Query: 280 YCEEGTSPEGPRGPYHEMDWTYGQHAADQSPPAGAGAGAGAAGTGERVPAESVPAGLGSS 459
YC EGT P GPY+ W G S G+G G G E V +S PA + +S
Sbjct: 121 YCNEGT----PTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQS-PAIMSAS 175
Query: 460 P 462
P
Sbjct: 176 P 176
>ref|ZP_00131799.1| COG5295: Autotransporter adhesin [Haemophilus somnus 2336]
Length = 737
Score = 38.1 bits (87), Expect = 0.058
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -2
Query: 461 GDEPRPAGTLSAGTRSPVPAAPAPAPAPAGGD*SAA 354
G +P+ + SA +P PAAPAP+PAPA SA+
Sbjct: 138 GSATQPSSSASASAPAPTPAAPAPSPAPAAAPPSAS 173
>ref|NP_823870.1| putative sensor-like histidine kinase [Streptomyces avermitilis
MA-4680] gi|29606343|dbj|BAC70405.1| putative
sensor-like histidine kinase [Streptomyces avermitilis
MA-4680]
Length = 1278
Score = 35.0 bits (79), Expect = 0.49
Identities = 22/51 (43%), Positives = 24/51 (46%)
Frame = +1
Query: 298 SPEGPRGPYHEMDWTYGQHAADQSPPAGAGAGAGAAGTGERVPAESVPAGL 450
+P G RGP G A Q PA AGAGAGA G+ P P GL
Sbjct: 790 APGGARGPQQ------GPAAPQQGRPAPAGAGAGAGAFGQNAP--GAPQGL 832
>ref|ZP_00054185.1| COG0508: Pyruvate/2-oxoglutarate dehydrogenase complex,
dihydrolipoamide acyltransferase (E2) component, and
related enzymes [Magnetospirillum magnetotacticum]
Length = 477
Score = 34.7 bits (78), Expect = 0.64
Identities = 17/39 (43%), Positives = 22/39 (55%)
Frame = -2
Query: 443 AGTLSAGTRSPVPAAPAPAPAPAGGD*SAACCPYVQSIS 327
A +A +P PAAPAPAPAPA +A P + I+
Sbjct: 256 AAGAAAAAPAPKPAAPAPAPAPAAAPAAAGVMPSAKKIA 294
