KCC003117A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003117A_C01 KCC003117A_c01
CGCTGGTGGTGCTTCCCAAGGCGCTGCGAGGCTCTTCGGAGGCCGTCGCCTCGCTGCAGC
GTCTGGAGCGCTACATGCTGCTGGACGAGTTCGAGGACGCGCCCAAGAGCAAGATTGTGG
AGGCGCGCTTCGACAACGCCGTGCTGTCTTACCCAGGCAGCAAAGAGGACTTCCGCCTCA
GCATTCCCAGCTTCGAGGTCAAGAGCGGCGAGGTGGTGGCGGTGGTGGGCCGCGTGGGCA
GCGGCAAGTCGTCCATCTTCCAGGCGGTGCTGAACCACATGAACCTGGAGAGCGGCGCGC
TGCACGTGGGTGGCTTAATGGCCTACGTGCCGCAAACGCCGTGGGTACAGAACCTGACGC
TGCGCGACAACATCACGTTCGGCCTGCCCTTCGACGAGGACAAGTACAAGAAGGTGGTCC
ACGCCTGCGCACTGGAGCTGGACCTGCAGATCCTGCCCAAGGGCGACCAGACCATGGCGG
GCGAGCGCGGCATCAACCTGTCCGGCGGCCAGCGCCAGCGCGTGTGCCTGGCTCGCGCCG
CCTACCACGACTGCGACCTCATCCTGCTGGACAACCCGCTCAGTGCGGTGGACCAGCACA
CGGCGCGCCACATCTTTGACAAGTGCATCAAGGGCATCTTCAAGGACAAGGCCGTCATCT
GGATCACCCACCAGCTGGAGCTGCTGCCCGAGGTGACCAACATTTGCATCACGGACGGCG
GCAAGTCGCTGTACTTTGGCCCCTACAACCCCGAGGCGCTCAACAAGCACCTGCCCGTGG
ACCACCTGCTGTTCGCCACCGTGGAGGCCGGCGAGAGCGGCGTGCAGAAGCCGGCCGAGG
GCGAGAA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003117A_C01 KCC003117A_c01
         (847 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAL35383.1|AF442557_1 putative ABC transporter [Chlamydomonas...   295  8e-79
ref|NP_182301.1| glutathione-conjugate transporter AtMRP4 [Arabi...   210  2e-53
ref|NP_191829.1| glutathione-conjugate transporter, putative [Ar...   206  3e-52
gb|AAL85706.1|AF474335_1 ABC transporter ABCC.3 [Dictyostelium d...   204  1e-51
ref|NP_187915.1| ABC transporter family protein [Arabidopsis tha...   201  1e-50

>gb|AAL35383.1|AF442557_1 putative ABC transporter [Chlamydomonas reinhardtii]
          Length = 1082

 Score =  295 bits (754), Expect = 8e-79
 Identities = 156/269 (57%), Positives = 191/269 (70%), Gaps = 9/269 (3%)
 Frame = +3

Query: 18  KALRGSSEAVASLQRLERYMLLDEFEDA------PKSKIVEARFDNAVLSYPGSKEDFRL 179
           KALR  SEA ASLQRLE Y LL+E          PK+    A  +N V  +P S  ++ L
Sbjct: 134 KALRAVSEANASLQRLEAY-LLEEVPSGTAAVKTPKNAPPGAVIENGVFHHP-SNPNWHL 191

Query: 180 SIPSFEVKSGEVVAVVGRVGSGKSSIFQAVLNHMNLESGALHVGGLMAYVPQTPWVQNLT 359
            +P FEVK G+VVAVVGR+ +GKSS+ QA+L +M  E G+ +VGG ++YVPQ PW+QNL+
Sbjct: 192 HVPKFEVKPGQVVAVVGRIAAGKSSLVQAILGNMVKEHGSFNVGGRISYVPQNPWLQNLS 251

Query: 360 LRDNITFGLPFDEDKYKKVVHACALELDLQILPKGDQTMAGERGINLSGGQRQRVCLARA 539
           LRDN+ FG  FDE+KY  V+ +CAL LDLQIL  GDQ+ AG RG+N SGGQRQRV LAR 
Sbjct: 252 LRDNVLFGEQFDENKYTDVIESCALTLDLQILSNGDQSKAGIRGVNFSGGQRQRVNLARC 311

Query: 540 AYHDCDLILLDNPLSAVDQHTARHIFDKCIKGIFKDKAVIWITHQLELLPEVTNICITDG 719
           AY D DL+LLDN LSAVD HTA HIFDKCIKG+F DKAV+ +THQ+E +P   N+ I D 
Sbjct: 312 AYADADLVLLDNALSAVDHHTAHHIFDKCIKGLFSDKAVVLVTHQIEFMPRCDNVAIMDE 371

Query: 720 GKSLYFGPYNPEA---LNKHLPVDHLLFA 797
           G+ LYFG +N EA   L K LP+ HLL A
Sbjct: 372 GRCLYFGKWNEEAQHLLGKLLPITHLLHA 400

 Score = 87.8 bits (216), Expect = 2e-16
 Identities = 79/281 (28%), Positives = 125/281 (44%), Gaps = 20/281 (7%)
 Frame = +3

Query: 57   QRLERYMLLDEFEDAPKSKIVEARFDNAVLSYPGSKEDFRLSIP------SFEVKSGEVV 218
            +RL+  +++D+   A        RF++  + Y       RL  P      +F++  GE V
Sbjct: 797  RRLQGPVVVDDAALARWPATGNIRFEDVWMQY-------RLDAPWALKGVTFKINDGEKV 849

Query: 219  AVVGRVGSGKSSIFQAVLNHMNLESGALHVGGL-------------MAYVPQTPWVQNLT 359
              VGR GSGKS+   A+     L  G + V G+             ++ +PQ P +   T
Sbjct: 850  GAVGRTGSGKSTTLLALYRMFELGKGRILVDGVDIATLSLKRLRTGLSIIPQEPVMFTGT 909

Query: 360  LRDNIT-FGLPFDEDKYKKVVHACALELDLQILPKGDQTMAGERGINLSGGQRQRVCLAR 536
            +R N+  FG   D+    +V+    LE   Q     D  + G  G   S GQ Q VCLAR
Sbjct: 910  VRSNLDPFGEFKDDAILWEVLKKVGLEDQAQHAGGLDGQVDGTGGKAWSLGQMQLVCLAR 969

Query: 537  AAYHDCDLILLDNPLSAVDQHTARHIFDKCIKGIFKDKAVIWITHQLELLPEVTNICITD 716
            AA     ++ LD   +A+D HT   I  + IK +F D+  I I H+L+ + E   I + +
Sbjct: 970  AALRAVPILCLDEATAAMDPHT-EAIVQQTIKKVFDDRTTITIAHRLDTIIESDKIIVME 1028

Query: 717  GGKSLYFGPYNPEALNKHLPVDHLLFATVEAGESGVQKPAE 839
             G  + +   +    N+      L+  T  A  + ++K AE
Sbjct: 1029 QGSLMEYESPSKLLANRDSMFSKLVDKTGPAAAAALRKMAE 1069

>ref|NP_182301.1| glutathione-conjugate transporter AtMRP4 [Arabidopsis thaliana]
            gi|25297463|pir||F84919 glutathione-conjugate transporter
            AtMRP4 [imported] - Arabidopsis thaliana
            gi|2959767|emb|CAA05625.1| AtMRP4 [Arabidopsis thaliana]
            gi|3738292|gb|AAC63634.1| glutathione-conjugate
            transporter AtMRP4 [Arabidopsis thaliana]
            gi|7716583|gb|AAF68441.1|AF243509_1 MRP4 [Arabidopsis
            thaliana]
          Length = 1516

 Score =  210 bits (535), Expect = 2e-53
 Identities = 119/283 (42%), Positives = 171/283 (60%), Gaps = 9/283 (3%)
 Frame = +3

Query: 15   PKALRGSSEAVASLQRLERYMLLDEFEDAPKSKIVEARFDNAV------LSYPGSKEDFR 176
            P+++   S+A+ SL RL+ YM+  E  +    + +    + AV       S+     +  
Sbjct: 599  PQSMISLSQAMISLGRLDSYMMSKELSEDAVERALGCDGNTAVEVRDGSFSWDDEDNEPA 658

Query: 177  LSIPSFEVKSGEVVAVVGRVGSGKSSIFQAVLNHMNLESGALHVGGLMAYVPQTPWVQNL 356
            LS  +F+VK GE+ A+VG VGSGKSS+  +VL  M+  SG + V G   YV QT W++N 
Sbjct: 659  LSDINFKVKKGELTAIVGTVGSGKSSLLASVLGEMHRISGQVRVCGSTGYVAQTSWIENG 718

Query: 357  TLRDNITFGLPFDEDKYKKVVHACALELDLQILPKGDQTMAGERGINLSGGQRQRVCLAR 536
            T++DNI FGLP   +KY KV++ C+LE DLQ++  GD+T  GERGINLSGGQ+QR+ LAR
Sbjct: 719  TVQDNILFGLPMVREKYNKVLNVCSLEKDLQMMEFGDKTEIGERGINLSGGQKQRIQLAR 778

Query: 537  AAYHDCDLILLDNPLSAVDQHTARHIFDKCIKGIFKDKAVIWITHQLELLPEVTNICITD 716
            A Y +CD+ LLD+  SAVD HT   IF KC++G  K K V+ +THQ++ L  V  I +  
Sbjct: 779  AVYQECDVYLLDDVFSAVDAHTGSDIFKKCVRGALKGKTVLLVTHQVDFLHNVDCILVMR 838

Query: 717  GGKSLYFGPYNPEALNKHLPVDHLLFA---TVEAGESGVQKPA 836
             GK +  G Y+ E ++  L    L+ A   ++E  E+G    A
Sbjct: 839  DGKIVESGKYD-ELVSSGLDFGELVAAHETSMELVEAGADSAA 880

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
 Frame = +3

Query: 189  SFEVKSGEVVAVVGRVGSGKSSIFQAVLNHMNLESGALHVGGL-------------MAYV 329
            + ++K GE V VVGR GSGKS++ Q +   +    G + + G+                +
Sbjct: 1295 TLDIKGGEKVGVVGRTGSGKSTLIQVLFRLVEPSGGKIIIDGIDISTLGLHDLRSRFGII 1354

Query: 330  PQTPWVQNLTLRDNITFGLPFDEDKYKKVVHACALELDLQILPKGDQTMAGERGINLSGG 509
            PQ P +   T+R NI     + +++  K +  C L+  +   P+   ++  + G N S G
Sbjct: 1355 PQEPVLFEGTVRSNIDPTEQYSDEEIWKSLERCQLKDVVATKPEKLDSLVVDNGENWSVG 1414

Query: 510  QRQRVCLARAAYHDCDLILLDNPLSAVDQHTARHIFDKCIKGIFKDKAVIWITHQLELLP 689
            QRQ +CL R       L+ LD   ++VD  T   +  K I+  F    +I I H++  + 
Sbjct: 1415 QRQLLCLGRVMLKRSRLLFLDEATASVDSQTDA-VIQKIIREDFASCTIISIAHRIPTVM 1473

Query: 690  EVTNICITDGGKSLYF 737
            +   + + D GK+  F
Sbjct: 1474 DGDRVLVIDAGKAKEF 1489

>ref|NP_191829.1| glutathione-conjugate transporter, putative [Arabidopsis thaliana]
            gi|11277358|pir||T48059 ABC transporter-like protein -
            Arabidopsis thaliana gi|7362750|emb|CAB83120.1| ABC
            transporter-like protein [Arabidopsis thaliana]
          Length = 1539

 Score =  206 bits (525), Expect = 3e-52
 Identities = 116/280 (41%), Positives = 164/280 (58%), Gaps = 12/280 (4%)
 Frame = +3

Query: 15   PKALRGSSEAVASLQRLERYMLLDEFEDAPKSKI------VEARFDNAVLSYPGSKEDFR 176
            P+++   S+A+ SL RL+ YM+  E  +    +       V     +   S+    ++  
Sbjct: 597  PQSMISLSQAMISLGRLDAYMMSRELSEETVERSQGCDGNVAVEIKDGSFSWDDEDDEPA 656

Query: 177  LSIPSFEVKSGEVVAVVGRVGSGKSSIFQAVLNHMNLESGALHVGGLMAYVPQTPWVQNL 356
            +   +FEVK GE+ A+VG VGSGKSS+  +VL  M+  SG + V G  AYV QT W+QN 
Sbjct: 657  IENINFEVKKGELAAIVGTVGSGKSSLLASVLGEMHKLSGKVRVCGTTAYVAQTSWIQNG 716

Query: 357  TLRDNITFGLPFDEDKYKKVVHACALELDLQILPKGDQTMAGERGINLSGGQRQRVCLAR 536
            T++DNI FGLP +  KY +V+  C LE D+QI+  GDQT  GERGINLSGGQ+QR+ LAR
Sbjct: 717  TVQDNILFGLPMNRSKYNEVLKVCCLEKDMQIMEFGDQTEIGERGINLSGGQKQRIQLAR 776

Query: 537  AAYHDCDLILLDNPLSAVDQHTARHIFDKCIKGIFKDKAVIWITHQLELLPEVTNICITD 716
            A Y + D+ LLD+  SAVD HT   IF KC++G  K K ++ +THQ++ L  V  I +  
Sbjct: 777  AVYQESDVYLLDDVFSAVDAHTGSDIFKKCVRGALKGKTILLVTHQVDFLHNVDRILVMR 836

Query: 717  GGKSLYFGPYNPEALNKHLPVDHLLFA------TVEAGES 818
             G  +  G Y+ E ++  L    L+ A       VEAG +
Sbjct: 837  DGMIVQSGKYD-ELVSSGLDFGELVAAHETSMELVEAGSA 875

 Score = 83.2 bits (204), Expect = 5e-15
 Identities = 52/193 (26%), Positives = 91/193 (46%), Gaps = 13/193 (6%)
 Frame = +3

Query: 189  SFEVKSGEVVAVVGRVGSGKSSIFQAVLNHMNLESGALHVGGL-------------MAYV 329
            + ++K GE + VVGR GSGKS++ Q +   +    G + + G+                +
Sbjct: 1318 TIDIKGGEKIGVVGRTGSGKSTLIQVLFRLVEPSGGKIIIDGIDICTLGLHDLRSRFGII 1377

Query: 330  PQTPWVQNLTLRDNITFGLPFDEDKYKKVVHACALELDLQILPKGDQTMAGERGINLSGG 509
            PQ P +   T+R NI     + +++  K +  C L+  +   P+   ++  + G N S G
Sbjct: 1378 PQEPVLFEGTVRSNIDPTEKYSDEEIWKSLERCQLKDVVASKPEKLDSLVADNGENWSVG 1437

Query: 510  QRQRVCLARAAYHDCDLILLDNPLSAVDQHTARHIFDKCIKGIFKDKAVIWITHQLELLP 689
            QRQ +CL R       ++ LD   ++VD  T   I  K I+  F D  +I I H++  + 
Sbjct: 1438 QRQLLCLGRVMLKRSRILFLDEATASVDSQTDAMI-QKIIREDFSDCTIISIAHRIPTVM 1496

Query: 690  EVTNICITDGGKS 728
            +   + + D GK+
Sbjct: 1497 DCDRVLVIDAGKA 1509

>gb|AAL85706.1|AF474335_1 ABC transporter ABCC.3 [Dictyostelium discoideum]
          Length = 1390

 Score =  204 bits (520), Expect = 1e-51
 Identities = 116/271 (42%), Positives = 161/271 (58%), Gaps = 8/271 (2%)
 Frame = +3

Query: 57   QRLERYMLLDEFEDAPKSKIVEARFDN------AVLSYPGSK--EDFRLSIPSFEVKSGE 212
            QR+  ++LL E ++   SKI +   +N      A L++   K  E F L   +FE K   
Sbjct: 389  QRVTDFLLLPEMKEI--SKIEDPSIENGIYIRDATLTWNQEKKEESFTLKNINFEAKGKT 446

Query: 213  VVAVVGRVGSGKSSIFQAVLNHMNLESGALHVGGLMAYVPQTPWVQNLTLRDNITFGLPF 392
            +  +VG VGSGKSS+ QA+L  M++  G++ + G +AYVPQ  W+ N TL+DNI FG P+
Sbjct: 447  LTMIVGSVGSGKSSLIQAMLGEMDVLDGSVAMKGNVAYVPQQAWIINATLKDNILFGSPY 506

Query: 393  DEDKYKKVVHACALELDLQILPKGDQTMAGERGINLSGGQRQRVCLARAAYHDCDLILLD 572
            DE KY+KV+  CALE D+++ P+GD    GERG+NLSGGQ+QRV +ARA Y D D+ +LD
Sbjct: 507  DEAKYRKVLEVCALERDIELFPQGDLVEIGERGVNLSGGQKQRVSIARAVYSDSDVYILD 566

Query: 573  NPLSAVDQHTARHIFDKCIKGIFKDKAVIWITHQLELLPEVTNICITDGGKSLYFGPYNP 752
            +PLSAVD H  +H+F +C KGI K K VI   +QL  LP   N  +   G+    G Y  
Sbjct: 567  DPLSAVDAHVGKHLFHRCFKGILKSKTVILAANQLNYLPFAHNTVVLKAGEISERGSYQ- 625

Query: 753  EALNKHLPVDHLLFATVEAGESGVQKPAEGE 845
            + +N       LL A     ES V +  E +
Sbjct: 626  QLINAQKEFSGLLQA-YGVDESAVNEDVEDD 655

 Score = 90.1 bits (222), Expect = 4e-17
 Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 16/215 (7%)
 Frame = +3

Query: 129  FDNAVLSYPGSKEDFRLSIPSFEVKSGEVVAVVGRVGSGKSSIFQAVLNHMNLESGALHV 308
            FDN V+ Y    +     I S E+K+ E + +VGR G+GKSSI  A+   +    GA+ +
Sbjct: 1042 FDNLVMRYREGLDPVLKGI-SCEIKAKEKIGIVGRTGAGKSSIVLALFRLIEASEGAILI 1100

Query: 309  GGL-------------MAYVPQTPWVQNLTLRDNITFGLPFDE---DKYKKVVHACALEL 440
             G              +A +PQ P + + TLR+NI    PF+E   D+   V+    L  
Sbjct: 1101 DGENIAKFGLKDLRRNLAIIPQDPVLFSGTLRENID---PFNEKTDDQLWSVLKDIQLHD 1157

Query: 441  DLQILPKGDQTMAGERGINLSGGQRQRVCLARAAYHDCDLILLDNPLSAVDQHTARHIFD 620
              + L  G  +   E G N S GQRQ +CLARA   D  +++LD   ++VD H +  +  
Sbjct: 1158 VAKSLEGGLDSKVTENGDNWSVGQRQLLCLARALLRDPKILVLDEATASVDGH-SDSLIQ 1216

Query: 621  KCIKGIFKDKAVIWITHQLELLPEVTNICITDGGK 725
              I+  F +  ++ I H+L  + +   I + D GK
Sbjct: 1217 ATIREKFSNCTILTIAHRLNTIMDSDRIIVLDAGK 1251

>ref|NP_187915.1| ABC transporter family protein [Arabidopsis thaliana]
            gi|10172595|dbj|BAB01399.1| multidrug
            resistance-associated protein (MRP); ABC-transoprter
            [Arabidopsis thaliana]
          Length = 1514

 Score =  201 bits (511), Expect = 1e-50
 Identities = 117/272 (43%), Positives = 158/272 (58%), Gaps = 6/272 (2%)
 Frame = +3

Query: 12   LPKALRGSSEAVASLQRLERYMLLDEF-----EDAPK-SKIVEARFDNAVLSYPGSKEDF 173
            LP  +    +   SL RL  Y+ LD       E  PK S  V     N+ LS+  S  + 
Sbjct: 597  LPDTISMIVQTKVSLDRLASYLCLDNLQPDIVERLPKGSSDVAVEVINSTLSWDVSSSNP 656

Query: 174  RLSIPSFEVKSGEVVAVVGRVGSGKSSIFQAVLNHMNLESGALHVGGLMAYVPQTPWVQN 353
             L   +F+V  G  VAV G VGSGKSS+  ++L  +   SG+L V G  AYV Q+PW+Q+
Sbjct: 657  TLKDINFKVFPGMKVAVCGTVGSGKSSLLSSLLGEVPKVSGSLKVCGTKAYVAQSPWIQS 716

Query: 354  LTLRDNITFGLPFDEDKYKKVVHACALELDLQILPKGDQTMAGERGINLSGGQRQRVCLA 533
              + DNI FG P + ++Y KV+ AC+L  DL+IL  GDQT+ GERGINLSGGQ+QR+ +A
Sbjct: 717  GKIEDNILFGKPMERERYDKVLEACSLSKDLEILSFGDQTVIGERGINLSGGQKQRIQIA 776

Query: 534  RAAYHDCDLILLDNPLSAVDQHTARHIFDKCIKGIFKDKAVIWITHQLELLPEVTNICIT 713
            RA Y D D+ L D+P SAVD HT  H+F + + G+   K+VI++THQ+E LP    I + 
Sbjct: 777  RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLCSKSVIYVTHQVEFLPAADLILVM 836

Query: 714  DGGKSLYFGPYNPEALNKHLPVDHLLFATVEA 809
              G+    G YN + LN       L+ A  EA
Sbjct: 837  KDGRISQAGKYN-DILNSGTDFMELIGAHQEA 867

 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
 Frame = +3

Query: 201  KSGEVVAVVGRVGSGKSSIFQAVLNHMNLESGALHVGGL-------------MAYVPQTP 341
            K G    +VGR GSGKS++ Q +   +   +G + + G+             ++ +PQ P
Sbjct: 1294 KGGLRTGIVGRTGSGKSTLIQTLFRIVEPSAGEIRIDGVNILTIGLHDLRLRLSIIPQDP 1353

Query: 342  WVQNLTLRDNITFGLPFDEDKYKKVVHACALELDLQILPKGDQTMAGERGINLSGGQRQR 521
             +   T+R N+     + +D+  + +  C L  +++   +   +   E G N S GQRQ 
Sbjct: 1354 TMFEGTMRSNLDPLEEYTDDQIWEALDKCQLGDEVRKKEQKLDSSVSENGDNWSMGQRQL 1413

Query: 522  VCLARAAYHDCDLILLDNPLSAVDQHTARHIFDKCIKGIFKDKAVIWITHQLELLPEVTN 701
            VCL R       +++LD   ++VD  T  ++  K ++  F D  VI I H++  + +   
Sbjct: 1414 VCLGRVLLKRSKILVLDEATASVDTAT-DNLIQKTLREHFSDCTVITIAHRISSVIDSDM 1472

Query: 702  ICITDGG 722
            + +   G
Sbjct: 1473 VLLLSNG 1479



EST assemble image


clone accession position
1 MXL047b01_r BP095767 1 313
2 MXL095f10_r BP098571 1 361
3 MXL059a08_r BP096456 128 616
4 LCL017f08_r BP096456 233 528
5 LCL031b01_r BP096456 275 627
6 MXL066a11_r BP096863 330 847
7 LCL091g03_r BP096863 365 788




Chlamydomonas reinhardtii
Kazusa DNA Research Institute