Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003093A_C01 KCC003093A_c01
(412 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA67579.1| type II intermediate filament of hair keratin [H... 33 0.72
ref|NP_002275.1| keratin, hair, basic, 6; hard keratin, type II,... 33 0.72
ref|XP_317582.1| ENSANGP00000025094 [Anopheles gambiae] gi|30175... 33 0.72
gb|AAM01020.1|AC090488_20 Hypothetical protein [Oryza sativa] gi... 33 0.94
gb|AAK84483.1| putative copia-like polyprotein [Lycopersicon esc... 33 1.2
>emb|CAA67579.1| type II intermediate filament of hair keratin [Homo sapiens]
Length = 483
Score = 33.5 bits (75), Expect = 0.72
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 140 LSVCPQAPRSSSTSARATASCTPSVIAVLVS--PTRSNIPLGNTNNCEPHA 286
++VC + R AS T V++ VS P+ SN+ +G TN C P A
Sbjct: 421 VNVCVSSSRGGVVCGDLCASTTAPVVSTRVSSVPSNSNVVVGTTNACAPSA 471
>ref|NP_002275.1| keratin, hair, basic, 6; hard keratin, type II, 6 [Homo sapiens]
gi|2695879|emb|CAA03979.1| keratin protein Hb6 [Homo
sapiens]
Length = 486
Score = 33.5 bits (75), Expect = 0.72
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 140 LSVCPQAPRSSSTSARATASCTPSVIAVLVS--PTRSNIPLGNTNNCEPHA 286
++VC + R AS T V++ VS P+ SN+ +G TN C P A
Sbjct: 424 VNVCVSSSRGGVVCGDLCASTTAPVVSTRVSSVPSNSNVVVGTTNACAPSA 474
>ref|XP_317582.1| ENSANGP00000025094 [Anopheles gambiae] gi|30175475|gb|EAA43936.1|
ENSANGP00000025094 [Anopheles gambiae str. PEST]
Length = 137
Score = 33.5 bits (75), Expect = 0.72
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Frame = +3
Query: 78 LFNEVTEVCYGVRLAWHGLFDCQCARKHLDPHLHPHVPQLPARHPSSQS------LSAQH 239
LF E +E C +++G + H + H + P P+S + S QH
Sbjct: 12 LFQESSEQCGSA--SFNG-------KLHSNEHTNTSTKHEPINQPNSATPKKSLFYSIQH 62
Query: 240 AVTYHSATQITVNHTHTDTHASILRVKIQ*GARGVEPL 353
T+ T HTHT TH ++KI+ R E L
Sbjct: 63 THTHTHTHTHTHTHTHTHTHTHTQKLKIKRARRSEEAL 100
>gb|AAM01020.1|AC090488_20 Hypothetical protein [Oryza sativa] gi|31430411|gb|AAP52328.1|
hypothetical protein [Oryza sativa (japonica
cultivar-group)]
Length = 249
Score = 33.1 bits (74), Expect = 0.94
Identities = 16/35 (45%), Positives = 21/35 (59%)
Frame = +2
Query: 158 APRSSSTSARATASCTPSVIAVLVSPTRSNIPLGN 262
APR + SA C P+ IAV +SPTR + P G+
Sbjct: 205 APRHTRVSAARRRLCLPAAIAVPLSPTRCSHPAGS 239
>gb|AAK84483.1| putative copia-like polyprotein [Lycopersicon esculentum]
Length = 779
Score = 32.7 bits (73), Expect = 1.2
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +2
Query: 143 SVCPQAPRSSSTSARATASCTPSVIAVLVSPTRSNIPLGN---TNNCEPHAHRHTRINLK 313
++ Q P + + R T S P+V A P R +IP G N PH R I K
Sbjct: 230 NIANQLPDAFTNLPRITKSYIPAVNA----PVRVDIPTGQIVKANESRPHLKRGRPIGSK 285
Query: 314 GQNTVRRKG 340
+N +RKG
Sbjct: 286 DKNPRKRKG 294
