Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003068A_C01 KCC003068A_c01
(442 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00030584.1| COG1262: Uncharacterized conserved protein [B... 46 1e-04
gb|AAG02418.1|AF286030_1 regulator Ustilago maydis 1 protein; Rum1 39 0.012
ref|NP_689782.1| hypothetical protein FLJ31158 [Homo sapiens] gi... 39 0.016
ref|NP_197821.1| hypothetical protein [Arabidopsis thaliana] 39 0.016
ref|ZP_00088665.1| COG0532: Translation initiation factor 2 (IF-... 38 0.028
>ref|ZP_00030584.1| COG1262: Uncharacterized conserved protein [Burkholderia fungorum]
Length = 656
Score = 45.8 bits (107), Expect = 1e-04
Identities = 30/79 (37%), Positives = 39/79 (48%)
Frame = -1
Query: 292 LRLARRRNAGASATPATGAVAPQGRAAVSVALPRPCFSRPPLAPVL*ATPPSEFCSGFIE 113
LR A NA ++ATPA +VAP +AA P P S P L P A P+ + +
Sbjct: 354 LRAAATSNAPSAATPAAPSVAPAPQAA----RPTPPPSAPALKPTASAPAPATPPAATVA 409
Query: 112 *GPLSKGPGKGERRGCCTC 56
P++ P GE R C TC
Sbjct: 410 QKPVTHAPVAGESRDCATC 428
>gb|AAG02418.1|AF286030_1 regulator Ustilago maydis 1 protein; Rum1
Length = 2289
Score = 39.3 bits (90), Expect = 0.012
Identities = 23/96 (23%), Positives = 38/96 (38%), Gaps = 12/96 (12%)
Frame = +3
Query: 159 TGAKGGRLKQGRGSATETAARPWGATAPVAGVAEAPAFRRRAS------------RRRSS 302
T A R + R AT T A + + P RR R ++
Sbjct: 474 TVASTRRSARKRSEATSTPASSSRNSLQLTSTPMTPLISRRRKGVSPHLEADSYLRAQAG 533
Query: 303 TKGADDAMCNLCKASDEPASILLCGNCGKGYRVRCL 410
+ ++ MC +C ++ ++LLC C +GY + CL
Sbjct: 534 NQAQEEQMCEICLRGEDGPNMLLCDECNRGYHMYCL 569
>ref|NP_689782.1| hypothetical protein FLJ31158 [Homo sapiens]
gi|16550518|dbj|BAB70995.1| unnamed protein product
[Homo sapiens]
Length = 295
Score = 38.9 bits (89), Expect = 0.016
Identities = 30/104 (28%), Positives = 41/104 (38%)
Frame = +3
Query: 78 SPFPGPLLKGPYSMNPLQNSEGGVAHKTGAKGGRLKQGRGSATETAARPWGATAPVAGVA 257
S FP K P ++S+G + H G + GRG + E A+R WG + G A
Sbjct: 184 SAFPPSKPKSPRGRVRARSSDGRLRHPAWRAGSGGRGGRGPSAELASRYWGRRRALPGAA 243
Query: 258 EAPAFRRRASRRRSSTKGADDAMCNLCKASDEPASILLCGNCGK 389
+ RA RR G + P + L GN GK
Sbjct: 244 DLRPKGARADDRRPLRAG---------RKLHLPEAARLPGNVGK 278
>ref|NP_197821.1| hypothetical protein [Arabidopsis thaliana]
Length = 349
Score = 38.9 bits (89), Expect = 0.016
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 318 DAMCNLCKASDEPASILLCGNCGKGYRVRCLGQLL 422
D +C C + +PA +LLC C KG+ + CL +L
Sbjct: 32 DTVCEECSSGKQPAKLLLCDKCDKGFHLFCLRPIL 66
>ref|ZP_00088665.1| COG0532: Translation initiation factor 2 (IF-2; GTPase)
[Azotobacter vinelandii]
Length = 771
Score = 38.1 bits (87), Expect = 0.028
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 17/99 (17%)
Frame = +3
Query: 42 ALRLQHVQHPRRSPFPGPLLK--------GPYSMNPLQNSEG-GVAHKTGAKGGRLK--- 185
ALR Q V P P PG L+ GP PLQ + G +TG + GRL+
Sbjct: 23 ALRRQPVAGP--GPLPGRRLRRRRRALRPGPGGRRPLQQRQRPGSGRRTGGRAGRLRACP 80
Query: 186 -----QGRGSATETAARPWGATAPVAGVAEAPAFRRRAS 287
G G+A + A R GA AP AG + ++ RA+
Sbjct: 81 GTAAGAGSGAAQQGAGR--GAAAPAAGASARRRWQCRAA 117
