KCC003057A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003057A_C01 KCC003057A_c01
cacagcgctctttcacacataaaaccgttgcccactcgcgcctcaaattcaacaaccaat
atggccacctacgccctgccGCTGCACCACCATGGCAAGAGCAAGGTCCGCCTGGGGCGC
GTCTGGCGCGACGGCAACGTTCACCATATGGTGGAGTGGAACGTGAACACTATGATTGAC
TCTGATATGGAGCACGCGTTCCTGAACGGTGACAACACGGGCATGACCGCCACGGACACC
CAGAAGAACACGGTCTACGTGGTGGCGCAGCGGATGTCCCAGAAGTGCACAATCGAACAA
TATGCGATCGCGTTGGCTCAGCACTTTGTGCGCACCTACCCGCTGGTTAGCAAGGCCAAG
ATCTATGTGGAGCAGAAGCCATGGACTCGCGTCCAGCAATCGGGCCTGCCTCACGACCAC
GGCTTTGCGCTGCAGGGCACCGAGGTGCGCACTGTGTACGTGACCTACGACAAGGCCGGC
ACCCTGGACGTGACGGCGGGCCTGAAGGACCTGAGCCTGCTCAAGACCACGCAGAGCGGC
TACGAGGGCTTCCTGCGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003057A_C01 KCC003057A_c01
         (558 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAG28465.1|AF195795_1 urate oxidase II; UO [Chlamydomonas rei...   341  3e-93
dbj|BAB18538.1| uricase [Lotus corniculatus var. japonicus]           150  1e-35
dbj|BAA78607.1| uricase (Nod-35) [Medicago sativa]                    150  1e-35
dbj|BAA78608.1| uricase (Nod-35) [Medicago sativa]                    149  2e-35
emb|CAB77204.1| urate oxidase [Cicer arietinum] gi|7242495|emb|C...   147  7e-35

>gb|AAG28465.1|AF195795_1 urate oxidase II; UO [Chlamydomonas reinhardtii]
          Length = 295

 Score =  341 bits (875), Expect = 3e-93
 Identities = 165/166 (99%), Positives = 165/166 (99%)
 Frame = +1

Query: 61  MATYALPLHHHGKSKVRLGRVWRDGNVHHMVEWNVNTMIDSDMEHAFLNGDNTGMTATDT 240
           MATYALPLHHHGKSKVRLGRVWRDG VHHMVEWNVNTMIDSDMEHAFLNGDNTGMTATDT
Sbjct: 1   MATYALPLHHHGKSKVRLGRVWRDGTVHHMVEWNVNTMIDSDMEHAFLNGDNTGMTATDT 60

Query: 241 QKNTVYVVAQRMSQKCTIEQYAIALAQHFVRTYPLVSKAKIYVEQKPWTRVQQSGLPHDH 420
           QKNTVYVVAQRMSQKCTIEQYAIALAQHFVRTYPLVSKAKIYVEQKPWTRVQQSGLPHDH
Sbjct: 61  QKNTVYVVAQRMSQKCTIEQYAIALAQHFVRTYPLVSKAKIYVEQKPWTRVQQSGLPHDH 120

Query: 421 GFALQGTEVRTVYVTYDKAGTLDVTAGLKDLSLLKTTQSGYEGFLR 558
           GFALQGTEVRTVYVTYDKAGTLDVTAGLKDLSLLKTTQSGYEGFLR
Sbjct: 121 GFALQGTEVRTVYVTYDKAGTLDVTAGLKDLSLLKTTQSGYEGFLR 166

>dbj|BAB18538.1| uricase [Lotus corniculatus var. japonicus]
          Length = 307

 Score =  150 bits (379), Expect = 1e-35
 Identities = 73/157 (46%), Positives = 105/157 (66%), Gaps = 1/157 (0%)
 Frame = +1

Query: 91  HGKSKVRLGRVWRDGNVHH-MVEWNVNTMIDSDMEHAFLNGDNTGMTATDTQKNTVYVVA 267
           HGK +VR+ RVW++   HH +VEW V+  + SD  +++L  DN+ + ATDT KNTVY  A
Sbjct: 14  HGKERVRVARVWKNNQGHHFVVEWRVSISLLSDCLNSYLRDDNSDIVATDTMKNTVYAKA 73

Query: 268 QRMSQKCTIEQYAIALAQHFVRTYPLVSKAKIYVEQKPWTRVQQSGLPHDHGFALQGTEV 447
           +  S+  ++E +AI LA+HF   Y  V+ A + + +KPW RV   G PH+HGF L G+E 
Sbjct: 74  KECSEILSVEDFAILLAKHFTSFYKQVTTAIVKIVEKPWERVNVDGQPHEHGFKL-GSEK 132

Query: 448 RTVYVTYDKAGTLDVTAGLKDLSLLKTTQSGYEGFLR 558
            T      K+G L +T+G++ LSLLKTT+SG+EGF+R
Sbjct: 133 HTAEAIVQKSGALQLTSGIEGLSLLKTTKSGFEGFIR 169

>dbj|BAA78607.1| uricase (Nod-35) [Medicago sativa]
          Length = 308

 Score =  150 bits (378), Expect = 1e-35
 Identities = 73/158 (46%), Positives = 105/158 (66%), Gaps = 2/158 (1%)
 Frame = +1

Query: 91  HGKSKVRLGRVWR--DGNVHHMVEWNVNTMIDSDMEHAFLNGDNTGMTATDTQKNTVYVV 264
           HGK +VR+ RVW+  DG  H +VEW V+  + SD  ++++  DN+ + ATDT KNTVY  
Sbjct: 14  HGKERVRVARVWKSKDGKQHFVVEWRVSINLLSDCVNSYVRDDNSDIVATDTMKNTVYAK 73

Query: 265 AQRMSQKCTIEQYAIALAQHFVRTYPLVSKAKIYVEQKPWTRVQQSGLPHDHGFALQGTE 444
           A+  S+  ++E +AI LA+HF   Y  V+ A + + +KPW RV   G PHDHGF L G+E
Sbjct: 74  AKECSEILSVEDFAILLAKHFTSFYSQVTTAIVKIVEKPWERVNVDGQPHDHGFKL-GSE 132

Query: 445 VRTVYVTYDKAGTLDVTAGLKDLSLLKTTQSGYEGFLR 558
             T      K+G L +T+G++ LS+LKTT+SG+EGF+R
Sbjct: 133 KHTTEAIVKKSGALQLTSGIEGLSVLKTTKSGFEGFIR 170

>dbj|BAA78608.1| uricase (Nod-35) [Medicago sativa]
          Length = 308

 Score =  149 bits (377), Expect = 2e-35
 Identities = 73/158 (46%), Positives = 105/158 (66%), Gaps = 2/158 (1%)
 Frame = +1

Query: 91  HGKSKVRLGRVWR--DGNVHHMVEWNVNTMIDSDMEHAFLNGDNTGMTATDTQKNTVYVV 264
           HGK +VR+ RVW+  DG  H +VEW V+  + SD  ++++  DN+ + ATDT KNTVY  
Sbjct: 14  HGKERVRVARVWKSKDGKQHFVVEWRVSINLLSDCVNSYIRDDNSDIVATDTMKNTVYAK 73

Query: 265 AQRMSQKCTIEQYAIALAQHFVRTYPLVSKAKIYVEQKPWTRVQQSGLPHDHGFALQGTE 444
           A+  S+  ++E +AI LA+HF   Y  V+ A + + +KPW RV   G PHDHGF L G+E
Sbjct: 74  AKECSEILSVEDFAILLAKHFTSFYSQVTTAIVKIVEKPWERVNVDGQPHDHGFKL-GSE 132

Query: 445 VRTVYVTYDKAGTLDVTAGLKDLSLLKTTQSGYEGFLR 558
             T      K+G L +T+G++ LS+LKTT+SG+EGF+R
Sbjct: 133 RHTTEAIVKKSGALQLTSGIEGLSVLKTTKSGFEGFVR 170

>emb|CAB77204.1| urate oxidase [Cicer arietinum] gi|7242495|emb|CAB77205.1| urate
           oxidase [Cicer arietinum]
          Length = 308

 Score =  147 bits (372), Expect = 7e-35
 Identities = 73/158 (46%), Positives = 104/158 (65%), Gaps = 2/158 (1%)
 Frame = +1

Query: 91  HGKSKVRLGRVWR--DGNVHHMVEWNVNTMIDSDMEHAFLNGDNTGMTATDTQKNTVYVV 264
           HGK +VR+ RVW+  DG  H +VEW V+  + SD  ++++  DN+ + ATDT KNTVY  
Sbjct: 14  HGKERVRVARVWKSKDGKRHFVVEWRVSINLLSDCVNSYIRDDNSDIVATDTMKNTVYAK 73

Query: 265 AQRMSQKCTIEQYAIALAQHFVRTYPLVSKAKIYVEQKPWTRVQQSGLPHDHGFALQGTE 444
           A+  S+  + E +AI LA+HF   Y  V+ A + + +KPW RV   G PH+HGF L G+E
Sbjct: 74  AKECSEILSAEDFAILLAKHFTSFYRQVTTAIVNIVEKPWERVSVDGQPHEHGFKL-GSE 132

Query: 445 VRTVYVTYDKAGTLDVTAGLKDLSLLKTTQSGYEGFLR 558
             T      K+G L +T+G++ LSLLKTT+SG+EGF+R
Sbjct: 133 KHTTEAIVKKSGALQLTSGIEGLSLLKTTKSGFEGFIR 170



EST assemble image


clone accession position
1 LCL004f11_r AV626227 1 474
2 LCL053c07_r AV629156 194 558




Chlamydomonas reinhardtii
Kazusa DNA Research Institute