Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003054A_C01 KCC003054A_c01
(346 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_518816.1| PROBABLE PORIN (OMP) ABC TRANSPORTER PROTEIN [R... 36 0.12
ref|ZP_00059519.1| COG1020: Non-ribosomal peptide synthetase mod... 33 1.0
ref|NP_294181.1| hypothetical protein [Deinococcus radiodurans] ... 33 1.4
pir||JQ0984 Ocs-element binding factor 1 - maize 32 2.3
dbj|BAB21762.1| gag-like protein [Bombyx mori] 32 2.3
>ref|NP_518816.1| PROBABLE PORIN (OMP) ABC TRANSPORTER PROTEIN [Ralstonia
solanacearum] gi|17427706|emb|CAD14225.1| PROBABLE PORIN
(OMP) ABC TRANSPORTER PROTEIN [Ralstonia solanacearum]
Length = 484
Score = 36.2 bits (82), Expect = 0.12
Identities = 21/57 (36%), Positives = 30/57 (51%)
Frame = -1
Query: 265 ASANAQLLAPHPTIGEAHAGLLSCLGAGPSSVRTLLDQLKRQSGEQTLQPSGSWLLS 95
A+A AQ +A H + + +GLL +GA SS R + DQ +T +G W LS
Sbjct: 55 AAARAQSVAQHEKLTQGRSGLLPQIGAAWSSTRIIFDQTAPAEFNKTFSSTG-WTLS 110
>ref|ZP_00059519.1| COG1020: Non-ribosomal peptide synthetase modules and related
proteins [Thermobifida fusca]
Length = 1079
Score = 33.1 bits (74), Expect = 1.0
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +3
Query: 48 TKRPLILHELPSTSVLLS-SHDPEGCSVCSPDCLLSWSSNVRTELGPAPRQDSRPACASP 224
T PL+L LP + L +DP+ S + +L V T+L RP CA
Sbjct: 379 THYPLVLVVLPEEDITLCVDYDPDQFSAADAEAVLDLVVRVLTQLVD---DSERPLCAFD 435
Query: 225 IVGCGARSCALAEAQTRSSCLAH 293
++G R+ A TR H
Sbjct: 436 LLGDAERAALAAHNATRHPLAEH 458
>ref|NP_294181.1| hypothetical protein [Deinococcus radiodurans]
gi|7472740|pir||F75518 hypothetical protein -
Deinococcus radiodurans (strain R1)
gi|6458143|gb|AAF10038.1|AE001904_14 hypothetical
protein [Deinococcus radiodurans]
Length = 839
Score = 32.7 bits (73), Expect = 1.4
Identities = 18/77 (23%), Positives = 37/77 (47%)
Frame = +3
Query: 57 PLILHELPSTSVLLSSHDPEGCSVCSPDCLLSWSSNVRTELGPAPRQDSRPACASPIVGC 236
P+ +P+T SS + G + P+ + S R+++ PR++ PA +SP+
Sbjct: 402 PIPATPIPATPAGRSSGESAGTAAARPNAAPAPVSEDRSDVSGLPRREDAPAESSPVAAS 461
Query: 237 GARSCALAEAQTRSSCL 287
AR + A + ++ +
Sbjct: 462 PARGASSAPSSAPAAAV 478
>pir||JQ0984 Ocs-element binding factor 1 - maize
Length = 193
Score = 32.0 bits (71), Expect = 2.3
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = -2
Query: 246 SLPRTPRLVKRTPACCPA---SELGLAPCARCWTSSRDNPASKHYSLR 112
S P TP +RTP PA S AP RC SSR + AS S R
Sbjct: 73 SRPSTPASSRRTPCSGPAPPSSATASAPSTRCSASSRSSAASPWTSRR 120
>dbj|BAB21762.1| gag-like protein [Bombyx mori]
Length = 553
Score = 32.0 bits (71), Expect = 2.3
Identities = 18/53 (33%), Positives = 26/53 (48%)
Frame = -2
Query: 291 VPSSCSWFVPLPTHNSLPRTPRLVKRTPACCPASELGLAPCARCWTSSRDNPA 133
VPS +W PLP N+ P ++ PA P+ + +P T+S DN A
Sbjct: 448 VPSGSAWAKPLPYTNTAAAPPSAIRPAPAIRPSPAIHSSPATSTPTAS-DNLA 499
