Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003035A_C01 KCC003035A_c01
(501 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176210.2| polyprotein -related [Arabidopsis thaliana] 35 0.52
pir||E96624 hypothetical protein T2K10.7 [imported] - Arabidopsi... 35 0.52
ref|NP_579033.1| hypothetical protein PF1304 [Pyrococcus furiosu... 34 0.88
ref|NP_000650.1| autoimmune regulator AIRE isoform 3; AIRE prote... 34 1.2
ref|NP_000374.1| autoimmune regulator AIRE isoform 1; AIRE prote... 34 1.2
>ref|NP_176210.2| polyprotein -related [Arabidopsis thaliana]
Length = 1328
Score = 35.0 bits (79), Expect = 0.52
Identities = 35/125 (28%), Positives = 49/125 (39%)
Frame = +1
Query: 76 PHVPQVSRTTHQGKPSQRITQPCPREKARRQYPLRRKAN*AHISLHASPEQF*ILYNCRR 255
P VP +R HQ PSQ P P P+ + +SP+ ++ R
Sbjct: 740 PSVPPPTRDPHQPPPSQPAPSPSPLSPPSMSSPV----------MTSSPQ-----FSSNR 784
Query: 256 QSTEYVAAAGDHLHTDYQI*VLPDLVSNSNTVRGATTSVPHAQSSRSNPASAGPVSHSLN 435
ST GD+ H DY + S+ + G TS P S S P S+ S+ N
Sbjct: 785 DST---TLHGDYSHVDYGL-------SSPSNPPGPITS-PTTSKSPSEPTSSPSHSNQPN 833
Query: 436 WTYPH 450
T P+
Sbjct: 834 KTPPN 838
>pir||E96624 hypothetical protein T2K10.7 [imported] - Arabidopsis thaliana
gi|4249381|gb|AAD14478.1|AAD14478 Strong similarity to
gb|AF039376 Evelknievel retrotransposon polyprotein from
Arabidopsis arenosa. [Arabidopsis thaliana]
Length = 1194
Score = 35.0 bits (79), Expect = 0.52
Identities = 35/125 (28%), Positives = 49/125 (39%)
Frame = +1
Query: 76 PHVPQVSRTTHQGKPSQRITQPCPREKARRQYPLRRKAN*AHISLHASPEQF*ILYNCRR 255
P VP +R HQ PSQ P P P+ + +SP+ ++ R
Sbjct: 740 PSVPPPTRDPHQPPPSQPAPSPSPLSPPSMSSPV----------MTSSPQ-----FSSNR 784
Query: 256 QSTEYVAAAGDHLHTDYQI*VLPDLVSNSNTVRGATTSVPHAQSSRSNPASAGPVSHSLN 435
ST GD+ H DY + S+ + G TS P S S P S+ S+ N
Sbjct: 785 DST---TLHGDYSHVDYGL-------SSPSNPPGPITS-PTTSKSPSEPTSSPSHSNQPN 833
Query: 436 WTYPH 450
T P+
Sbjct: 834 KTPPN 838
>ref|NP_579033.1| hypothetical protein PF1304 [Pyrococcus furiosus DSM 3638]
gi|18893406|gb|AAL81428.1| hypothetical protein
[Pyrococcus furiosus DSM 3638]
Length = 828
Score = 34.3 bits (77), Expect = 0.88
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -2
Query: 470 RGASVRWCG*VQFRLWLTGPADAGFDLDD 384
+G+ VRWC +Q+R+ LT + G DLDD
Sbjct: 295 KGSEVRWCSSLQYRINLTIQNNVGIDLDD 323
>ref|NP_000650.1| autoimmune regulator AIRE isoform 3; AIRE protein; autoimmune
regulator (automimmune polyendocrinopathy candidiasis
ectodermal dystrophy); APECED protein [Homo sapiens]
gi|2696621|dbj|BAA23992.1| AIRE-3 [Homo sapiens]
gi|2696623|dbj|BAA23993.1| AIRE-3 [Homo sapiens]
Length = 254
Score = 33.9 bits (76), Expect = 1.2
Identities = 19/56 (33%), Positives = 28/56 (49%)
Frame = +3
Query: 288 PFAYRLSDLSAAGPR*QQQYGTWRHYISSTRTIVQVKPRVRRPRQPQPELDLSTPP 455
P A+ L+ LS P + GTWR T+ +V+PR PR +P ++ PP
Sbjct: 118 PRAFHLACLSP--PLREIPSGTWRCSSCLQATVQEVQPRAEEPRPQEPPVETPLPP 171
>ref|NP_000374.1| autoimmune regulator AIRE isoform 1; AIRE protein; autoimmune
regulator (automimmune polyendocrinopathy candidiasis
ectodermal dystrophy); APECED protein [Homo sapiens]
gi|3334119|sp|O43918|AIRE_HUMAN Autoimmune regulator
(Autoimmune polyendocrinopathy candidiasis ectodermal
dystrophy protein) (APECED protein)
gi|2665371|emb|CAB10790.1| AIRE protein [Homo sapiens]
gi|2696615|dbj|BAA23988.1| AIRE-1 [Homo sapiens]
gi|2696619|dbj|BAA23990.1| AIRE-1 [Homo sapiens]
gi|7768776|dbj|BAA95560.1| autoimmune regulator (APECED
protein) [Homo sapiens]
Length = 545
Score = 33.9 bits (76), Expect = 1.2
Identities = 19/56 (33%), Positives = 28/56 (49%)
Frame = +3
Query: 288 PFAYRLSDLSAAGPR*QQQYGTWRHYISSTRTIVQVKPRVRRPRQPQPELDLSTPP 455
P A+ L+ LS P + GTWR T+ +V+PR PR +P ++ PP
Sbjct: 315 PRAFHLACLSP--PLREIPSGTWRCSSCLQATVQEVQPRAEEPRPQEPPVETPLPP 368
