Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003030A_C01 KCC003030A_c01
(546 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00014845.1| hypothetical protein [Rhodospirillum rubrum] 37 0.17
gb|AAF13270.1|AF199422_1 actin binding protein ShroomS [Mus musc... 35 0.65
dbj|BAC98181.1| mKIAA1481 protein [Mus musculus] 35 0.65
pir||S51511 capsanthin/capsorubin synthase (EC 5.5.1.-) - pepper... 35 0.65
ref|NP_056571.1| shroom [Mus musculus] gi|6467990|gb|AAF13269.1|... 35 0.65
>ref|ZP_00014845.1| hypothetical protein [Rhodospirillum rubrum]
Length = 162
Score = 37.0 bits (84), Expect = 0.17
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +1
Query: 325 RARKRVTAPSAPPVARPEGGECCSSFAPKFFPSHSWRMGM 444
RA AP + P+ E GEC +FAP F P+ SWR M
Sbjct: 23 RAGDDFIAPVSDPLTLRECGECHMAFAPGFLPARSWRAMM 62
>gb|AAF13270.1|AF199422_1 actin binding protein ShroomS [Mus musculus]
Length = 1811
Score = 35.0 bits (79), Expect = 0.65
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -3
Query: 499 PSRPTGFLNLYTTKSHRHTSPYATSAREKTWGQNCCSTHHPLAAPQA 359
P L + T H H SPY + + G CS HH L++PQA
Sbjct: 387 PENEDSSLKRHITPPHGH-SPYPSERKNIHGGSRACSNHHSLSSPQA 432
>dbj|BAC98181.1| mKIAA1481 protein [Mus musculus]
Length = 1726
Score = 35.0 bits (79), Expect = 0.65
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -3
Query: 499 PSRPTGFLNLYTTKSHRHTSPYATSAREKTWGQNCCSTHHPLAAPQA 359
P L + T H H SPY + + G CS HH L++PQA
Sbjct: 308 PENEDSSLKRHITPPHGH-SPYPSERKNIHGGSRACSNHHSLSSPQA 353
>pir||S51511 capsanthin/capsorubin synthase (EC 5.5.1.-) - pepper
gi|840729|emb|CAA54961.1| putative chromoplastic
oxydo-reductase [Capsicum annuum]
Length = 471
Score = 35.0 bits (79), Expect = 0.65
Identities = 25/79 (31%), Positives = 37/79 (46%)
Frame = -1
Query: 546 TASVQRPSRVRVGLDTQAAQPVSLICTPRNLIDTHPHTPRVRGKKLGGKTAAALTTLWPR 367
T+ + PS + + A PV L R ++++ T +RG +L + LW R
Sbjct: 355 TSGIVHPSSGYMVARSMALAPVLL----RPIVESLGSTRMIRGSQLYHRV---WNGLWLR 407
Query: 366 HRRRRRRCHSFSCPTLRHL 310
HRRR R C+ F TL L
Sbjct: 408 HRRRVRECYCFGMETLLKL 426
>ref|NP_056571.1| shroom [Mus musculus] gi|6467990|gb|AAF13269.1|AF199421_1 PDZ
domain actin binding protein Shroom [Mus musculus]
Length = 1986
Score = 35.0 bits (79), Expect = 0.65
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -3
Query: 499 PSRPTGFLNLYTTKSHRHTSPYATSAREKTWGQNCCSTHHPLAAPQA 359
P L + T H H SPY + + G CS HH L++PQA
Sbjct: 562 PENEDSSLKRHITPPHGH-SPYPSERKNIHGGSRACSNHHSLSSPQA 607
